BAC Information

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BAC

Clone NameB6Ng01-133G19
Chromosome1 (Build37)
Map Location 143,671,277 - 143,672,081
singlet/doubletsinglet
Overlap genenone
Upstream geneEG226472
Downstream geneLOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G19.bB6Ng01-133G19.g
ACCDH933975DH933976
length1,127805
definitionDH933975|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G19, 5' end.DH933976|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaagggggtccatgtgtcatgcccctttcataggcagtgcaag
actgagatcatacagacctgatgacatgaacctggtccaggcgagcagac
catgcctaagacctcccctgctgggcactacattttgcagtggaagttaa
cattcctgagctaacctcagattccccaaccactactaagatagccaagt
aaatgatggagggatcaaagagaaagagaaacagatacatgtgtcccagt
aaagagacacttaacttgaggctatattgagtacttgtccatactgctgt
taagggccatgtctcagtccctggccctatagtagctccatctgttacca
ttaaatctctgttgatgtccctggtctggtctgctgtcttggtatatatt
gatgtataagtgctgtgcagagatggccctacacatcttctggatatgga
agagctggccccaaggggatgagaacaggaggccctacctctcaatagct
gtagcaggaagaatggaaggcctcactcctatcttgggcagctgtgaaga
gctagccaggggaaaacaatttgagagagctggccctgctatttatctgc
catgttgaagcctggtaagggagagatgtctttccccaactcctcagcac
ctagactagagagctggccccaggatcatgagaggaggaaagctatccct
acacctgacttgatgcactcaagaaaaaaggccatgaaccttgcctgtgc
agccaagaagagctggctctgattgcagggatgctagtgagccataccca
agggtttaagagataaagagctgtcccagcctctcactagttgcttcact
gagtgggctagccaggacagtactggagggctagactttggtgtgagggt
gcagtagatatgataggctgaccacctcagctaccatccaggcccaccca
gattcagagctttgagttggttcaccccagtatttacccccacttatcat
cttctagaatgtgtggaagtgctctgttctgcagatccaaagctgcagat
ttccaagaaacgggcaaagcagaatacttaagagcaactctggtgggtga
tgtggtatcgacatgtgagcagaatct
gaattcatgtaagagcagactgacacttgacctgtatgtcaacagtattg
aattaattggtgatctaagagtgaccatgtgatagggaaacctagataaa
tagtataagctaaagaagattaagcccttttggaagctcagttatagcta
gagtagtagaacatttgccagatgtgcatgaggcttctggttttaatccg
tgtaaacacaaatattagagttaataaaataaatattatttctactgcta
tattccaggttccttggcaaacactggggaatctgcatgccactgtgtca
gggaaggcatggtggtgattcattgtatttgtaaacaggaaatagaaaat
aacctaggaacatggcagggctatgaaaattcaaatcctgatactggtat
ttgatttcctccagagaattaccttctaaaagttcaacagtctttacaaa
tagttctcccagctgggagacaagctttcaaacgcacaagcctgtgggaa
catttgactttcaaaccacaatcagatatttaggaagtgttaatctcact
acacatgaattttcatcctttactgtgaatatgttagagaaaattcaatc
tttaaaatctggtctgtctttccagtttgtctccataatctcaagaagaa
aaaaaaggggggggtgtagtgctttctgggctgttgttggttcacaatta
gatatttacatgagttcgtctgtacttgagaaaatagaggaagagtgaga
gagcaagagagagagagacagaggcagagacagagaaggagggatggatg
gaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143671277_143672081
seq2: B6Ng01-133G19.g_71_875

seq1  GAATTCATGTAAGAGCAGACTGACACTTGACCTGTATGTCAACAGTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAAGAGCAGACTGACACTTGACCTGTATGTCAACAGTATTG  50

seq1  AATTAATTGGTGATCTAAGAGTGACCATGTGATAGGGAAACCTAGATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTGGTGATCTAAGAGTGACCATGTGATAGGGAAACCTAGATAAA  100

seq1  TAGTATAAGCTAAAGAAGATTAAGCCCTTTTGGAAGCTCAGTTATAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAGCTAAAGAAGATTAAGCCCTTTTGGAAGCTCAGTTATAGCTA  150

seq1  GAGTAGTAGAACATTTGCCAGATGTGCATGAGGCTTCTGGTTTTAATCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTAGAACATTTGCCAGATGTGCATGAGGCTTCTGGTTTTAATCCG  200

seq1  TGTAAACACAAATATTAGAGTTAATAAAATAAATATTATTTCTACTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACACAAATATTAGAGTTAATAAAATAAATATTATTTCTACTGCTA  250

seq1  TATTCCAGGTTCCTTGGCAAACACTGGGGAATCTGCATGCCACTGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGGTTCCTTGGCAAACACTGGGGAATCTGCATGCCACTGTGTCA  300

seq1  GGGAAGGCATGGTGGTGATTCATTGTATTTGTAAACAGGAAATAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGCATGGTGGTGATTCATTGTATTTGTAAACAGGAAATAGAAAAT  350

seq1  AACCTAGGAACATGGCAGGGCTATGAAAATTCAAATCCTGATACTGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGGAACATGGCAGGGCTATGAAAATTCAAATCCTGATACTGGTAT  400

seq1  TTGATTTCCTCCAGAGAATTACCTTCTAAAAGTTCAACAGTCTTTACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCCTCCAGAGAATTACCTTCTAAAAGTTCAACAGTCTTTACAAA  450

seq1  TAGTTCTCCCAGCTGGGAGACAAGCTTTCAAACGCACAAGCCTGTGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCCCAGCTGGGAGACAAGCTTTCAAACGCACAAGCCTGTGGGAA  500

seq1  CATTTGACTTTCAAACCACAATCAGATATTTAGGAAGTGTTAATCTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACTTTCAAACCACAATCAGATATTTAGGAAGTGTTAATCTCACT  550

seq1  ACACATGAATTTTCATCCTTTACTGTGAATATGTTAGAGAAAATTCAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGAATTTTCATCCTTTACTGTGAATATGTTAGAGAAAATTCAATC  600

seq1  TTTAAAATCTGGTCTGTCTTTCCAGTTTGTCTCCATAATCTCAAGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATCTGGTCTGTCTTTCCAGTTTGTCTCCATAATCTCAAGAAGAA  650

seq1  AAAAAAGGGGGGGGTGTAGTGCTTTCTGGGCTGTTGTTGGTTCACAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGGGGGGGTGTAGTGCTTTCTGGGCTGTTGTTGGTTCACAATTA  700

seq1  GATATTTACATGAGTTCGTCTGTACTTGAGAAAATAGAGGAAGAGTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTACATGAGTTCGTCTGTACTTGAGAAAATAGAGGAAGAGTGAGA  750

seq1  GAGCAAGAGAGAGAGAGACAGAGGCAGAGACAGAGAAGGAGGGATGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAGAGAGAGAGACAGAGGCAGAGACAGAGAAGGAGGGATGGATG  800

seq1  GAGGG  805
      |||||
seq2  GAGGG  805