BAC Information

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BAC

Clone NameB6Ng01-137G07
Chromosome1 (Build37)
Map Location 14,269,439 - 14,270,368
singlet/doubletsinglet
Overlap geneEya1
Upstream geneNcoa2, LOC665341, LOC100039812, EG621685, Tram1, Lactb2, Xkr9, LOC100039843, EG433273, LOC100039859, LOC100039869
Downstream geneLOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137G07.bB6Ng01-137G07.g
ACCDH936923DH936924
length1,143926
definitionDH936923|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G07, 5' end.DH936924|Mus musculus domesticus DNA, BAC clone: B6Ng01-137G07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaactg
ttcaacatccttaatcatcagggaaatgtatctcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgatg
agattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctcccctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatatccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactctcacaatatgtactctctgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgtaaaacacatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcctagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctttgaca
aaaggatggaacatctagtgattgccatatccagggatccatcccataat
cagcttccaaactctgacaccattgcatacactagcatgattttgctgta
aggaccagatatagctgtctcttgtgaaactatgccggggcctagcaaac
acataagtggatgctcacagtcagctattggatgggtcacacgcctccaa
tggagagctagagaagtacccaggagctaaaggggactgcaacctatagt
ggacacatatgactaccagtacccggagctcttgtctctgctgcttgtat
caaagatgcctagttccatcactggaaagaaggccatggactgcaactta
tgccggtacgggacgcatgcaagggagaggggtgtgaggtatg
gaattcagtctgtgctttcctctgaagagtgaggattggtgagacctgtg
agtttgcagagttggaggagacagagaacacgctatgggaaataggaacg
catgaggaggcagcttagaaatgtaaaagaggccagacatacagtcagag
gtctaaacaaagctggagctcttgaacatggactatgtattcacccagta
tgtattcaccctgttggttgcaacctctttaggggtcacatgtcagatac
atgtcatattagatatttacatcatgatttctaacagtggcagaattaca
gttatgaagtaataatgaaacaattttatggctgggggtcaccacgacct
gaggaactgtattaaagggtctcagtgttaggaaggttgagagccactgc
tttaaggcttagcaacccaggtttccaatcagagaaaagaaaagtcctat
aaggcaggggggtctatcgtgaagaacatccaggacaaacataaaatgga
caatgtgtataggagtcccgaagtccaggctggttgcattgtaccagaaa
cagctgggtatgaaagccttggcttcctcgagtcctctgcagaggaattc
agttattccttgagtaatgtgagtggctacaagattgtgagctagagagg
gatgtggagtgacttcactgaagcacagtctttgtggtggcaggagagag
ggagggtagagtgtgatggaggctgtacctaagtgtcacatggctgctgt
acttattctcagtgtgacatggtgagaagctgaagcagggcttatgtcct
ggatgagggctgggtgcgccacccatgtcttgatcctcaggttgctttat
ggctgggcatgtaagccatggtagataagaggctgctttggattgggatg
agtggaagggaagaaggttagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14269439_14270368
seq2: B6Ng01-137G07.g_66_991 (reverse)

seq1  CATCTCATGTCCTTCTT-CCATCCACTCATCCCAAATCCTAAAGCAGCCT  49
      |||||| |  ||||||| || |||||||||||| ||||| ||||||||||
seq2  CATCTC-TAACCTTCTTCCCTTCCACTCATCCC-AATCC-AAAGCAGCCT  47

seq1  GCTTATCTAGCCATGGCTTACATGCCCAGCCCTAAAGCAGCCTGAGGATC  99
       |||||||| ||||||||||||||||||||| ||||||| ||||||||||
seq2  -CTTATCTA-CCATGGCTTACATGCCCAGCCATAAAGCAACCTGAGGATC  95

seq1  TAGACATGGGTTGCGCACCCAGCCCTCATCCAGGACATAAGCCCTGCTTC  149
       |||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGGGTGGCGCACCCAGCCCTCATCCAGGACATAAGCCCTGCTTC  145

seq1  AGCTTCTCACCATGTCACACTGAG-ATGAGTACAGCAGCCATGTGGACAC  198
      |||||||||||||||||||||||| || |||||||||||||||| |||||
seq2  AGCTTCTCACCATGTCACACTGAGAATAAGTACAGCAGCCATGT-GACAC  194

seq1  TTAGGTACAGCCTCCATCACACTCTACCCTCCCTCTCTCCTGCCACCACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTACAGCCTCCATCACACTCTACCCTCCCTCTCTCCTGCCACCACA  244

seq1  AAGACTGTGCTTCAGTGAAGTCACTCCACATCCCTCTCTAGCTCACAATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTGCTTCAGTGAAGTCACTCCACATCCCTCTCTAGCTCACAATC  294

seq1  TTGTAGCCACTCACATTACTCAAGGAATAACTGAATTCCTCTGCAGAGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCCACTCACATTACTCAAGGAATAACTGAATTCCTCTGCAGAGGA  344

seq1  CTCGAGGAAGCCAAGGCTTTCATACCCAGCTGTTTCTGGTACAATGCAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGAAGCCAAGGCTTTCATACCCAGCTGTTTCTGGTACAATGCAAC  394

seq1  CAGCCTGGACTTCGGGACTCCTATACACATTGTCCATTTTATGTTTGTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGACTTCGGGACTCCTATACACATTGTCCATTTTATGTTTGTCC  444

seq1  TGGATGTTCTTCACGATAGACCCCCCTGCCTTATAGGACTTTTCTTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTCTTCACGATAGACCCCCCTGCCTTATAGGACTTTTCTTTTCT  494

seq1  CTGATTGGAAACCTGGGTTGCTAAGCCTTAAAGCAGTGGCTCTCAACCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGAAACCTGGGTTGCTAAGCCTTAAAGCAGTGGCTCTCAACCTT  544

seq1  CCTAACACTGAGACCCTTTAATACAGTTCCTCAGGTCGTGGTGACCCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACACTGAGACCCTTTAATACAGTTCCTCAGGTCGTGGTGACCCCCA  594

seq1  GCCATAAAATTGTTTCATTATTACTTCATAACTGTAATTCTGCCACTGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAAATTGTTTCATTATTACTTCATAACTGTAATTCTGCCACTGTT  644

seq1  AGAAATCATGATGTAAATATCTAATATGACATGTATCTGACATGTGACCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATGATGTAAATATCTAATATGACATGTATCTGACATGTGACCC  694

seq1  CTAAAGAGGTTGCAACCAACAGGGTGAATACATACTGGGTGAATACATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAGGTTGCAACCAACAGGGTGAATACATACTGGGTGAATACATAG  744

seq1  TCCATGTTCAAGAGCTCCAGCTTTGTTTAGACCTCTGACTGTATGTCTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTTCAAGAGCTCCAGCTTTGTTTAGACCTCTGACTGTATGTCTGG  794

seq1  CCTCTTTTACATTTCTAAGCTGCCTCCTCATGCGTTCCTATTTCCCATAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTACATTTCTAAGCTGCCTCCTCATGCGTTCCTATTTCCCATAG  844

seq1  CGTGTTCTCTGTCTCCTCCAACTCTGCAAACTCACAGGTCTCACCAATCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCTCTGTCTCCTCCAACTCTGCAAACTCACAGGTCTCACCAATCC  894

seq1  TCACTCTTCAGAGGAAAGCACAGACTGAATTC  930
      ||||||||||||||||||||||||||||||||
seq2  TCACTCTTCAGAGGAAAGCACAGACTGAATTC  926