BAC Information

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BAC

Clone NameB6Ng01-137L02
Chromosome1 (Build37)
Map Location 107,359,671 - 107,497,285
singlet/doubletdoublet
Overlap genePign
Upstream geneLOC383546, LOC100041134, Cdh20, Rnf152, LOC100041985
Downstream geneLOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634, Phlpp, LOC626075, Bcl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L02.bB6Ng01-137L02.g
ACCDH937143DH937144
length1,1361,053
definitionDH937143|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L02, 5' end.DH937144|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,496,150 - 107,497,285)(107,359,671 - 107,360,708)
sequence
gaattctcatatactggggcatagaaccttcacaggaccaaggacctctc
ctcccattgatgaccgactaggccatcctctgctacatattcagctagag
ccatgagtcccaccatgtgttttccttgattggtggtttagtccctggga
gctctggggatactggttagttcatattgttgtttctcctgtggggctgc
aaatccctcagctccttgggtacgttttctagctccttcattggggaccc
tgtgctttgtccaatggatggctatgagcatccaattctgtatttgtcag
gcactggctgagcctctcacgagacagctctatcaggctcctgtcagcaa
gctcttattggcatccacaatactatctggttttggtggttgtttatggg
atggatccccaggtgtggcagtctctggatggtcattccttcagtctctg
ctccgaacttttaacaagattcttaagcagggtttcttatagaatgcaag
aatgtttctaggtagtcttctctggttcataaatttttctttctttttta
tttctttttaaaaaaatcatacaggattatgttcattttctagagaagag
tctcaaataaatgaatttcagaccatcccacctcaggttacacagaagat
ttacttaagtctcatcagaggtggggaaccaccagtcagaaagaagacaa
gtggcgtgatgtttgagcgatgcagttgtcatggttttatcatatatcac
ttcccgtagtaactttgtgtgcattgttagatgttgatgagactcacttt
aggaatgcaagcttagttaagcagtatataatcaaatttgcattgaaaca
tactttattcatatcataaaggcgattgttctgatatttccttttttcta
taatgttaagtaatgccttagggtttatatagtttttgatttttctataa
tttttagtattttctggacaacgtccgtacaaaatgatgaataagttcaa
gtatctcatgagcttccagcattagttaaactcctcccagagacattcta
tatgtgattcctaagaccctgttgggtgaagccaaatgcaccgatggcca
gcactgccttttttgctagaaccatgggaaggctta
gaattcaaatctctattttctgaatcaaaccagatgaagaaattggtgtg
ctcataacatggcaccacaatctccaaagaatatggaggttgaggaatgg
taaatattagtcactttaggaaatatgcactctgttataaaactgttgga
taagaacacataatggaaggaagaataaaatctgtaaaaaaatataaaaa
taaaaaagtaagccgggcgtggtggcgcagcctttaatcccagcacttgg
gaagtggaggcaggcggatttctgagttcaaggccagcctggtctacaga
gtgagttccaggacagccagggttacacagagaaaccctgtctctaaaaa
acaacaaaacaaaacaaaacaaaacaaaacgtagactgtgattgccatag
actcctggagaaataataacaaagcttcatacagaataaggacctagtag
acacaaggtaaagtcaagaggtaatagtccttctcagccatcaattagga
atctagtaggtgagttctttatgtcctgtgaagtttcacactcctttgga
aaaggaccttcctcccatggtcactgtataaagcaaatggaatatagttc
agacacacttagaatagattaaaagaataggacaacaacatgtttcttac
ccttcatcagctagtcatgcattagtggaaaaatattttcctgcaatgcc
gattttcaaataaagcctagagaaagtcctaagaaggtgttagacacccc
tgatcttatgagttggatactgagattccctttgtgagtggatctcagga
ctttctctctgaactgaccctcccacttgggtattagcaatgttaattgt
tggctactggggaaactccattccaggagagctgcccacctacagtatct
accagatgcatctgtatctatgcttacccggcaagtcaaactcacaccat
ttgccaagaacaaagctgggtgtctgaacaatatgtttttttctcttggg
ggttcttgagattagccagccagtttgggcatcttaaaaacataatggaa
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_107496150_107497285
seq2: B6Ng01-137L02.b_44_1179 (reverse)

seq1  TAAGCCTTCCTGTGTGTCCTAGACAAAAAGACAGTGCTGGCACATCGGTG  50
      ||||||||||  || || ||||  |||||| |||||||||| ||||||||
seq2  TAAGCCTTCCCATG-GTTCTAGCAAAAAAGGCAGTGCTGGC-CATCGGTG  48

seq1  CACTTATGCCTCACCCAAACAGGGTC-TAGGAATCCACATTATAGAAGTG  99
      || ||  || |||||| ||||||||| ||||||| |||| |||||||   
seq2  CA-TTTGGCTTCACCC-AACAGGGTCTTAGGAAT-CACA-TATAGAATGT  94

seq1  CTCTGGGA-GAGTTTAACTAATGCTGGGAGCTCATGAGATACTTGAACTT  148
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  CTCTGGGAGGAGTTTAACTAATGCTGGAAGCTCATGAGATACTTGAACTT  144

seq1  ATTCATCATTTTTGTAC-GACG-TGTTCAGAAAATACTAAAAATTATAGA  196
      |||||||| |||||||| |||| ||| |||||||||||||||||||||||
seq2  ATTCATCA-TTTTGTACGGACGTTGTCCAGAAAATACTAAAAATTATAGA  193

seq1  AAAATC-AAAACTATATAAACCCTAAGGCATTAC-TAACATTATAGGAAA  244
      |||||| ||||||||||||||||||||||||||| ||||||||||| |||
seq2  AAAATCAAAAACTATATAAACCCTAAGGCATTACTTAACATTATAGAAAA  243

seq1  AAGGAAATATCAGAACAATCGCCTTTATGATATGAAT-AAGTATGTTTCA  293
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGGAAATATCAGAACAATCGCCTTTATGATATGAATAAAGTATGTTTCA  293

seq1  ATGCAAATTTGAATATATACTGCTTAACTAAGCTTGCATTCCTAAAGTGA  343
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATTTGATTATATACTGCTTAACTAAGCTTGCATTCCTAAAGTGA  343

seq1  GTCTCATCAACATCTAACAATGCACACAAAGTTACTACGGGAAGTGATAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCAACATCTAACAATGCACACAAAGTTACTACGGGAAGTGATAT  393

seq1  ATGATAAAACCATGACAACTGCATCGCTCAAACATCACGCCACTTGTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAAACCATGACAACTGCATCGCTCAAACATCACGCCACTTGTCTT  443

seq1  CTTTCTGACTGGTGGTTCCCCACCTCTGATGAGACTTAAGTAAATCTTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGACTGGTGGTTCCCCACCTCTGATGAGACTTAAGTAAATCTTCT  493

seq1  GTGTAACCTGAGGTGGGATGGTCTGAAATTCATTTATTTGAGACTCTTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCTGAGGTGGGATGGTCTGAAATTCATTTATTTGAGACTCTTCT  543

seq1  CTAGAAAATGAACATAATCCTGTATGATTTTTTTAAAAAGAAATAAAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATGAACATAATCCTGTATGATTTTTTTAAAAAGAAATAAAAAA  593

seq1  GAAAGAAAAATTTATGAACCAGAGAAGACTACCTAGAAACATTCTTGCAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAATTTATGAACCAGAGAAGACTACCTAGAAACATTCTTGCAT  643

seq1  TCTATAAGAAACCCTGCTTAAGAATCTTGTTAAAAGTTCGGAGCAGAGAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAGAAACCCTGCTTAAGAATCTTGTTAAAAGTTCGGAGCAGAGAC  693

seq1  TGAAGGAATGACCATCCAGAGACTGCCACACCTGGGGATCCATCCCATAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAATGACCATCCAGAGACTGCCACACCTGGGGATCCATCCCATAA  743

seq1  ACAACCACCAAAACCAGATAGTATTGTGGATGCCAATAAGAGCTTGCTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACCAAAACCAGATAGTATTGTGGATGCCAATAAGAGCTTGCTGA  793

seq1  CAGGAGCCTGATAGAGCTGTCTCGTGAGAGGCTCAGCCAGTGCCTGACAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCTGATAGAGCTGTCTCGTGAGAGGCTCAGCCAGTGCCTGACAA  843

seq1  ATACAGAATTGGATGCTCATAGCCATCCATTGGACAAAGCACAGGGTCCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAATTGGATGCTCATAGCCATCCATTGGACAAAGCACAGGGTCCC  893

seq1  CAATGAAGGAGCTAGAAAACGTACCCAAGGAGCTGAGGGATTTGCAGCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGGAGCTAGAAAACGTACCCAAGGAGCTGAGGGATTTGCAGCCC  943

seq1  CACAGGAGAAACAACAATATGAACTAACCAGTATCCCCAGAGCTCCCAGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAGAAACAACAATATGAACTAACCAGTATCCCCAGAGCTCCCAGG  993

seq1  GACTAAACCACCAATCAAGGAAAACACATGGTGGGACTCATGGCTCTAGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAACCACCAATCAAGGAAAACACATGGTGGGACTCATGGCTCTAGC  1043

seq1  TGAATATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGGT  1093

seq1  CCTTGGTCCTGTGAAGGTTCTATGCCCCAGTATATGAGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTCCTGTGAAGGTTCTATGCCCCAGTATATGAGAATTC  1136

seq1: chr1_107359671_107360708
seq2: B6Ng01-137L02.g_66_1118

seq1  GAATTCAAATCTCTATTTTCTGAATCAAACCAGATGAAGAAATTGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTCTATTTTCTGAATCAAACCAGATGAAGAAATTGGTGTG  50

seq1  CTCATAACATGGCACCACAATCTCCAAAGAATATGGAGGTTGAGGAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAACATGGCACCACAATCTCCAAAGAATATGGAGGTTGAGGAATGG  100

seq1  TAAATATTAGTCACTTTAGGAAATATGCACTCTGTTATAAAACTGTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTAGTCACTTTAGGAAATATGCACTCTGTTATAAAACTGTTGGA  150

seq1  TAAGAACACATAATGGAAGGAAGAATAAAATCTGTAAAAAAATATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACACATAATGGAAGGAAGAATAAAATCTGTAAAAAAATATAAAAA  200

seq1  TAAAAAAGTAAGCCGGGCGTGGTGGCGCAGCCTTTAATCCCAGCACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGTAAGCCGGGCGTGGTGGCGCAGCCTTTAATCCCAGCACTTGG  250

seq1  GAAGTGGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  300

seq1  GTGAGTTCCAGGACAGCCAGGGTTACACAGAGAAACCCTGTCTCTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGTTACACAGAGAAACCCTGTCTCTAAAAA  350

seq1  ACAACAAAACAAAACAAAACAAAACAAAACGTAGACTGTGATTGCCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAACAAAACAAAACAAAACAAAACGTAGACTGTGATTGCCATAG  400

seq1  ACTCCTGGAGAAATAATAACAAAGCTTCATACAGAATAAGGACCTAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGAGAAATAATAACAAAGCTTCATACAGAATAAGGACCTAGTAG  450

seq1  ACACAAGGTAAAGTCAAGAGGTAATAGTCCTTCTCAGCCATCAATTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGTAAAGTCAAGAGGTAATAGTCCTTCTCAGCCATCAATTAGGA  500

seq1  ATCTAGTAGGTGAGTTCTTTATGTCCTGTGAAGTTTCACACTCCTTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTAGGTGAGTTCTTTATGTCCTGTGAAGTTTCACACTCCTTTGGA  550

seq1  AAAGGACCTTCCTCCCATGGTCACTGTATAAAGCAAATGGAATATAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCTTCCTCCCATGGTCACTGTATAAAGCAAATGGAATATAGTTC  600

seq1  AGACACACTTAGAATAGATTAAAAGAATAGGACAACAACATG-TTCTTAC  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGACACACTTAGAATAGATTAAAAGAATAGGACAACAACATGTTTCTTAC  650

seq1  CCTTCATCAGCTAGTCATGCATTAGTGGAAAAATA-TTTCCTGCAATGCC  698
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTCATCAGCTAGTCATGCATTAGTGGAAAAATATTTTCCTGCAATGCC  700

seq1  GA-TTTCAAATAAAGCCTAGAGAAAGTCCTAAGAAGGTGTTAGACACCCC  747
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAAATAAAGCCTAGAGAAAGTCCTAAGAAGGTGTTAGACACCCC  750

seq1  TGATCTTATGAGTTGGATACTGAGATT-CCATTGTGAGTGGATCTCAGGA  796
      ||||||||||||||||||||||||||| || |||||||||||||||||||
seq2  TGATCTTATGAGTTGGATACTGAGATTCCCTTTGTGAGTGGATCTCAGGA  800

seq1  CTTTCCTCTCTGAACTGACCCTCCCACTTGGGTATTAGCAATGTTAATTG  846
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTT-CTCTCTGAACTGACCCTCCCACTTGGGTATTAGCAATGTTAATTG  849

seq1  TTGGCTACTGGGGAAACTCCATTCCAGGAGAGCTGCCCACCTACAGTATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTACTGGGGAAACTCCATTCCAGGAGAGCTGCCCACCTACAGTATC  899

seq1  TACCAGATGCATCTGTCATCTATGCTTA-CCGTCAAGTCAAACTCACACC  945
      |||||||||||||||| ||||||||||| ||| |||||||||||||||||
seq2  TACCAGATGCATCTGT-ATCTATGCTTACCCGGCAAGTCAAACTCACACC  948

seq1  A-TTGCCAAG-ACAAAGCT-GGTGTCTAGAAC-ATATG---TTTTCTCCT  988
      | |||||||| |||||||| ||||||| |||| |||||   ||||||| |
seq2  ATTTGCCAAGAACAAAGCTGGGTGTCT-GAACAATATGTTTTTTTCTCTT  997

seq1  TGGGG-TCTT--GATTAG-CAGCCAGTTT-GGCATCTT-AGAACATAATG  1032
       |||| ||||  |||||| |||||||||| |||||||| | |||||||||
seq2  GGGGGTTCTTGAGATTAGCCAGCCAGTTTGGGCATCTTAAAAACATAATG  1047

seq1  GAAATT  1038
      ||||||
seq2  GAAATT  1053