BAC Information

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BAC

Clone NameB6Ng01-138H19
Chromosome1 (Build37)
Map Location 131,194,310 - 131,305,350
singlet/doubletdoublet
Overlap geneThsd7b
Upstream geneLct, Mcm6, Dars, LOC620659, Cxcr4, LOC100042732
Downstream geneLOC100042745, LOC100042740, Daf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138H19.bB6Ng01-138H19.g
ACCDH937735DH937736
length1,1121,029
definitionDH937735|Mus musculus domesticus DNA, BAC clone: B6Ng01-138H19, 5' end.DH937736|Mus musculus domesticus DNA, BAC clone: B6Ng01-138H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,304,219 - 131,305,350)(131,194,310 - 131,195,346)
sequence
gaattctggcaaatgtataagcaaaacttgaggtatgtaccagaaagaaa
gtatattttacatattgaaaactggagaaccaggagatgttagtgataag
acagcagatggtggtagctagccttgatacatgtataattccttgccaca
ttgaatataacgttatcaaagtaggggcttgagagatggctcagcagttg
agaatgcttgctgcttttacacaggacctgggttcaattcccagaactaa
tatggtgacttatcaatatatacaaaggatccattgccctcctctgacct
ccataagtaccagctacgcatgtgctgcaggcaaacatacatgcaggcaa
acattcacacgaataaaataaaattttaaaatctaaaaatattttttaat
attgccaaagtgacaatatgcaacctcttatgttcagccataatttatgt
cttgactgaaacctcaagacaggtactacattagaacaatccagctcatc
ttctccaagatatatgacctacaaagacacaagacaaaacatctgctgct
cttttaagttgttaaatgatagcgtgatttgttactcagcaataaatagc
cagtatttattctacatctctaaatttcctctggagatagaagaagataa
gaaatttttgtcagtaatagtggctgtcagtccatactctttattctcct
ggattgaagacttggaagtaaaacatagtagatctgaaactaagagaatc
aaattcaagattctcttctactccggctcactctgactctggaaaatttt
ctttgcccttctgaaatgccatgccctctcctacaaaatgagcatgcact
gccaaagagacaggttcaaatggtgtaaaatttcttaagcagtcagcctt
agctctgatatatggtagtgtttaaatgagaattagtgaataggaaatta
agagagtccaaaaagaggccaggtagtggagcaaatacttccttggaaaa
tacactagaaaaaaatgagatctatataaaacttggatcattaaaatact
tgatgctgagggcatatctgcatatgggagggggaggtgcttgtctggaa
agccttgatgcc
gaattcctgactttgctcagtgatggagtgcaacctgagagttagaaact
gacactcaccctctcctccccagttgctttccatcatggtgcttaatccc
agaaatgggacatctatttaaaaaaggttcactctctgattttgtgtttt
gtaaaagatgcgaaagaaagaaaatctaaaacaaaaataacatctaagca
tttaaataattgattcttttaaagaggcaatatgataatacaaattgcaa
gttaattttaataagcacactttaatcgtttaataaatatatagtatcaa
tatgtcttatttagtaaatatatcttagatattgtcttttatgtctggta
gtacttagtcctggtcttaacagatattaagtgcaagacacattttattt
ttagtgtgtaaccttgtcatcataatgaaatatttgttactgttccccac
tagtgctatgaggttcaatttacaggcaagttacactcacatatactggc
tgtatgcaggcatacaatatggcagctacacatctaagaggccaaatgag
tctatctctttgtatttcttttcacttgcacccaaccttagttttcatag
ctccatccagcccaaatgcagcagatgtgatctccattagtggaagggta
acttcatcatttctcctcatctttctagattttctgtgtcaaatgcttac
tgcacaagcgtgacaacttaaatttacccccctcccaccagtacccatgt
caaaagccagacatggtaggacttatctgtaatcccaatactgggatggc
agaggtagggggttctggggacttgctagtgtagatgagttgtaagcccc
aggttcagagaatttctctaaagaacagtatgaagagtagttgtggtcac
ataatagtgtgtatgtatgtatatatgtgtgtgtgtctgtgtgtgttgtt
ggggaactgtcagaatgcttccatatctattattctggagaacccattgg
gggcctctaggggtctgccgtagttgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131304219_131305350
seq2: B6Ng01-138H19.b_45_1156 (reverse)

seq1  GGCATCAAGCCTTCACAGGACCAAGCACCT-CCCCTCCCATTAATGCCAG  49
      ||||||||| |||  |||   ||||||||| ||||||||||  ||| |||
seq2  GGCATCAAGGCTTTCCAG--ACAAGCACCTCCCCCTCCCAT--ATG-CAG  45

seq1  ATAATGCCCCTCAGCATCAAAGTATTTTAATGATCCCAAAGTTTTATATT  99
      || ||| ||||||||||| |||||||||||||||||  |||||||||| |
seq2  AT-ATG-CCCTCAGCATC-AAGTATTTTAATGATCC--AAGTTTTATA-T  89

seq1  AGAATCTCATTTTTTTTTCTAGTGTATTTTCCAAGGAAGTATTTGCTTCC  149
      || ||||||  ||||||||||||||||||||||||||||||||||| |||
seq2  AG-ATCTCA--TTTTTTTCTAGTGTATTTTCCAAGGAAGTATTTGC-TCC  135

seq1  ACTTAACCTGGCCTCTTTTTTGGACTCTTCTTAATTTCCTATTCACCTAA  199
      |||  |||||||||| ||||||||||| ||||||||||||||||| ||||
seq2  ACT--ACCTGGCCTC-TTTTTGGACTC-TCTTAATTTCCTATTCA-CTAA  180

seq1  TTCTCATTTAAACACCTACCATATATCAGAGCTAAGGCTGACTGCTTAAG  249
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCTCATTTAAACA-CTACCATATATCAGAGCTAAGGCTGACTGCTTAAG  229

seq1  AAATTTTACACCATTTGAACCTGTCTCTTTGGCAGTGCATGCTCATTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTACACCATTTGAACCTGTCTCTTTGGCAGTGCATGCTCATTTTG  279

seq1  TAGGAGAGGGCATGGCATTTCAGAAGGGCAAAGAAAATTTTCCAGAGTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGGGCATGGCATTTCAGAAGGGCAAAGAAAATTTTCCAGAGTCA  329

seq1  GAGTGAGCCGGAGTAGAAGAGAATCTTGAATTTGATTCTCTTAGTTTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGCCGGAGTAGAAGAGAATCTTGAATTTGATTCTCTTAGTTTCAG  379

seq1  ATCTACTATGTTTTACTTCCAAGTCTTCAATCCAGGAGAATAAAGAGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTATGTTTTACTTCCAAGTCTTCAATCCAGGAGAATAAAGAGTAT  429

seq1  GGACTGACAGCCACTATTACTGACAAAAATTTCTTATCTTCTTCTATCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGACAGCCACTATTACTGACAAAAATTTCTTATCTTCTTCTATCTC  479

seq1  CAGAGGAAATTTAGAGATGTAGAATAAATACTGGCTATTTATTGCTGAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAATTTAGAGATGTAGAATAAATACTGGCTATTTATTGCTGAGT  529

seq1  AACAAATCACGCTATCATTTAACAACTTAAAAGAGCAGCAGATGTTTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCACGCTATCATTTAACAACTTAAAAGAGCAGCAGATGTTTTGT  579

seq1  CTTGTGTCTTTGTAGGTCATATATCTTGGAGAAGATGAGCTGGATTGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTCTTTGTAGGTCATATATCTTGGAGAAGATGAGCTGGATTGTTC  629

seq1  TAATGTAGTACCTGTCTTGAGGTTTCAGTCAAGACATAAATTATGGCTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAGTACCTGTCTTGAGGTTTCAGTCAAGACATAAATTATGGCTGA  679

seq1  ACATAAGAGGTTGCATATTGTCACTTTGGCAATATTAAAAAATATTTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAGGTTGCATATTGTCACTTTGGCAATATTAAAAAATATTTTTA  729

seq1  GATTTTAAAATTTTATTTTATTCGTGTGAATGTTTGCCTGCATGTATGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAAATTTTATTTTATTCGTGTGAATGTTTGCCTGCATGTATGTT  779

seq1  TGCCTGCAGCACATGCGTAGCTGGTACTTATGGAGGTCAGAGGAGGGCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCAGCACATGCGTAGCTGGTACTTATGGAGGTCAGAGGAGGGCAA  829

seq1  TGGATCCTTTGTATATATTGATAAGTCACCATATTAGTTCTGGGAATTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTTTGTATATATTGATAAGTCACCATATTAGTTCTGGGAATTGA  879

seq1  ACCCAGGTCCTGTGTAAAAGCAGCAAGCATTCTCAACTGCTGAGCCATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTCCTGTGTAAAAGCAGCAAGCATTCTCAACTGCTGAGCCATCT  929

seq1  CTCAAGCCCCTACTTTGATAACGTTATATTCAATGTGGCAAGGAATTATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCCCCTACTTTGATAACGTTATATTCAATGTGGCAAGGAATTATA  979

seq1  CATGTATCAAGGCTAGCTACCACCATCTGCTGTCTTATCACTAACATCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCAAGGCTAGCTACCACCATCTGCTGTCTTATCACTAACATCTC  1029

seq1  CTGGTTCTCCAGTTTTCAATATGTAAAATATACTTTCTTTCTGGTACATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCTCCAGTTTTCAATATGTAAAATATACTTTCTTTCTGGTACATA  1079

seq1  CCTCAAGTTTTGCTTATACATTTGCCAGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  CCTCAAGTTTTGCTTATACATTTGCCAGAATTC  1112

seq1: chr1_131194310_131195346
seq2: B6Ng01-138H19.g_64_1090

seq1  GAATTCCTGACTTTGCTCAGTGATGGAGTGCAACCTGAGAGTTAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACTTTGCTCAGTGATGGAGTGCAACCTGAGAGTTAGAAACT  50

seq1  GACACTCACCCTCTCCTCCCCAGTTGCTTTCCATCATGGTGCTTAATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCACCCTCTCCTCCCCAGTTGCTTTCCATCATGGTGCTTAATCCC  100

seq1  AGAAATGGGACATCTATTTAAAAAAGGTTCACTCTCTGATTTTGTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGGACATCTATTTAAAAAAGGTTCACTCTCTGATTTTGTGTTTT  150

seq1  GTAAAAGATGCGAAAGAAAGAAAATCTAAAACAAAAATAACATCTAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGATGCGAAAGAAAGAAAATCTAAAACAAAAATAACATCTAAGCA  200

seq1  TTTAAATAATTGATTCTTTTAAAGAGGCAATATGATAATACAAATTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAATTGATTCTTTTAAAGAGGCAATATGATAATACAAATTGCAA  250

seq1  GTTAATTTTAATAAGCACACTTTAATCGTTTAATAAATATATAGTATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTAATAAGCACACTTTAATCGTTTAATAAATATATAGTATCAA  300

seq1  TATGTCTTATTTAGTAAATATATCTTAGATATTGTCTTTTATGTCTGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTATTTAGTAAATATATCTTAGATATTGTCTTTTATGTCTGGTA  350

seq1  GTACTTAGTCCTGGTCTTAACAGATATTAAGTGCAAGACACATTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAGTCCTGGTCTTAACAGATATTAAGTGCAAGACACATTTTATTT  400

seq1  TTAGTGTGTAACCTTGTCATCATAATGAAATATTTGTTACTGTTCCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGTAACCTTGTCATCATAATGAAATATTTGTTACTGTTCCCCAC  450

seq1  TAGTGCTATGAGGTTCAATTTACAGGCAAGTTACACTCACATATACTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTATGAGGTTCAATTTACAGGCAAGTTACACTCACATATACTGGC  500

seq1  TGTATGCAGGCATACAATATGGCAGCTACACATCTAAGAGGCCAAATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCAGGCATACAATATGGCAGCTACACATCTAAGAGGCCAAATGAG  550

seq1  TCTATCTCTTTGTATTTCTTTTCACTTGCACCCAACCTTAGTTTTCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCTTTGTATTTCTTTTCACTTGCACCCAACCTTAGTTTTCATAG  600

seq1  CTCCATCCAGCCCAAATGCAGCAGATGTGATCTCCATTAGTGGAAGGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCAGCCCAAATGCAGCAGATGTGATCTCCATTAGTGGAAGGGTA  650

seq1  ACTTCATCATTTCTCCTCATCTTTCTAGATTTTCTGTGTCAAATGCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATCATTTCTCCTCATCTTTCTAGATTTTCTGTGTCAAATGCTTAC  700

seq1  TGCACAAGCGTGACAACTTAAATTTACCCCCCTCCCACCAGTACCCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAGCGTGACAACTTAAATTTACCCCCCTCCCACCAGTACCCATGT  750

seq1  CAAAAGCCAGACATGGTAGGACTTATCTGTAATCCCAATACTGGGATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCAGACATGGTAGGACTTATCTGTAATCCCAATACTGGGATGGC  800

seq1  AGAGGTAGGGGGTTCTGGGGACTTGCTAGTGTAGATGAGTTGTAAGCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGGGGGTTCTGGGGACTTGCTAGTGTAGATGAGTTGTAAGCCCC  850

seq1  AGGTTCAGAGAATTTCTCTAAAGAACAGTATGAAGAGTAGTTGTGGTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGAGAATTTCTCTAAAGAACAGTATGAAGAGTAGTTGTGGTCAC  900

seq1  ATAATAGTGTGTATGTATGTATATATGTGTGTGTGTCTGTGTGTTGTTTG  950
      |||||||||||||||||||||||||||||||||||||||||||     ||
seq2  ATAATAGTGTGTATGTATGTATATATGTGTGTGTGTCTGTGTG-----TG  945

seq1  TTTGTGTGTATCTTTCCAGATATGCTTCCTATATCT-TTTCTCTGGATGA  999
      ||  || | | || | |||| |||||||| |||||| ||  ||||||   
seq2  TTGTTGGGGAACTGT-CAGA-ATGCTTCC-ATATCTATTATTCTGGA--G  990

seq1  AACCTATTGGGGGCCCCTCAGGGGTCTGCCATAGTTGA  1037
      |||| |||||||||| || ||||||||||| |||||||
seq2  AACCCATTGGGGGCCTCT-AGGGGTCTGCCGTAGTTGA  1027