BAC Information

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BAC

Clone NameB6Ng01-140F16
Chromosome1 (Build37)
Map Location 81,062,295 - 81,063,224
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10, LOC665092
Downstream gene9430031J16Rik, EG621020, LOC433328, EG665145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140F16.bB6Ng01-140F16.g
ACCDH939107DH939108
length979921
definitionDH939107|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F16, 5' end.DH939108|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagctccattttttaatggggttatttgatt
ttctggacatagtactaccagaggatccagtaatacctctcctgggcata
tatccagaagatgttccaaccggtaagaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcatcagaaaatggatacaaaaaatttgatacatttacacaatggagt
actactcagctattaaaaagaatgaatttatgaaattcgtaggcaaatgg
atggacctggagggcatcatcctgagtgaggtaacacaatcaaaaaagaa
ctcaaatgatatgtactcacttataagtggatattagcccagaaacttag
tatagcgagatataaggtacaatttgcaaaacacatgaaactgaagaaga
acgaagaccaaagggtggacactttgccccttcttagaattggaaacaat
cacccatggaaggagttacagagacaaagtttggagctgagacaaaagga
tggaccatctagagcctgccatatccagagatccatcccataattagcct
ccatacgatgacaccatttcatacactagcaagattttgctgaaaggacc
ctgatatagctgtctcttgtgagactaggttggggcctagcaaacacata
agtagatgctcacagtcagctattggatggagcacagggcccccaatgga
gaagctagagaaagtatccaaggagctaaagagatctgcaaccctgtagg
tgcaacaacattatgaactaaccagtaccccggagctcttgactctagct
gcatatgtatcaaaagatggcctagtaggccatcactggaaagagagtcc
cattgacatgcaaactttatatgctctcagtacaggggaatggccagggc
caaaagtgggatgggtgggtagggaagtg
gaattctgctctaggagatccagtgctttcttctagcctctaagagcacc
atattcatggggacaaagtctacacacagataagcacaagcatacataat
taacattttaaataaaatatttaaaaaggacaaagcagtatatttttaca
tgcttgtctaaagctgaaatttgtatcaactatatgcaactaataattta
aatgatttaaatttttaattgattacagtgttctgttcttataaatatat
gcatctatataatattttctaggtatacttatgtctcattgcttatagat
aaacatagaaagagtgggttaattcaaaaccaaatattcatttggttctc
cttcaaattttctgcctaaaacacattagaattctggaaattttctttct
gtaattctattatctgttggctttggaatttaagggagcctttctgtgtc
ccccaaagtcagccattttgtcacaacgtctatcttggttaatgaatcag
aattcttcatgaccaacaccagaattaaatcaacttgaaacataaagctg
agctactgaaaaatattattgtggattcattccatgataaatcatggctc
acataacaaatggaatgagacagggtttacgctggtgtcaaataggaatg
actgtgacttgggagaacaaactcaggttaccctaaatattctattatag
tgcggtaagattttcatgatgtttttaaaagaacagaacaaagtcataat
tcaagatagtttagaagtacattggtgtaacaaggcagtatacactagtt
gatatgaggttcctaacacatagacaagcaaagatcacctggtctggcat
caatgagagaagagcacctagctcttgagagacttgagatccagggagtg
gggagtctggtgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81062295_81063224
seq2: B6Ng01-140F16.g_68_988 (reverse)

seq1  CCCCACCCCCACCCCACCAGACCTCCCCACTCCCTGGGGTCTCAAGTCTC  50
      ||||||     |||||||||| ||||||||||||| || |||||||||||
seq2  CCCCAC-----CCCCACCAGA-CTCCCCACTCCCT-GGATCTCAAGTCTC  43

seq1  TCAAGGGCTAGGTGCCTCTTCTCTCATTGATGCCAGACCAGGTGATCTTT  100
      ||||| |||||||| |||||||||||||||||||||||||||||||| ||
seq2  TCAAGAGCTAGGTG-CTCTTCTCTCATTGATGCCAGACCAGGTGATC-TT  91

seq1  TGCTTGTCTATGTGTTAGGAACCTCATATCAACTAGTGTATACTGCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCTATGTGTTAGGAACCTCATATCAACTAGTGTATACTGCCTTG  141

seq1  TTACACCAATGTACTTCTAAACTATCTTGAATTATGACTTTGTTCTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCAATGTACTTCTAAACTATCTTGAATTATGACTTTGTTCTGTTC  191

seq1  TTTTAAAAACATCATGAAAATCTTACCGCACTATAATAGAATATTTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAACATCATGAAAATCTTACCGCACTATAATAGAATATTTAGGG  241

seq1  TAACCTGAGTTTGTTCTCCCAAGTCACAGTCATTCCTATTTGACACCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGAGTTTGTTCTCCCAAGTCACAGTCATTCCTATTTGACACCAGC  291

seq1  GTAAACCCTGTCTCATTCCATTTGTTATGTGAGCCATGATTTATCATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCTGTCTCATTCCATTTGTTATGTGAGCCATGATTTATCATGGA  341

seq1  ATGAATCCACAATAATATTTTTCAGTAGCTCAGCTTTATGTTTCAAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCACAATAATATTTTTCAGTAGCTCAGCTTTATGTTTCAAGTTG  391

seq1  ATTTAATTCTGGTGTTGGTCATGAAGAATTCTGATTCATTAACCAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTCTGGTGTTGGTCATGAAGAATTCTGATTCATTAACCAAGATA  441

seq1  GACGTTGTGACAAAATGGCTGACTTTGGGGGACACAGAAAGGCTCCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTGTGACAAAATGGCTGACTTTGGGGGACACAGAAAGGCTCCCTTA  491

seq1  AATTCCAAAGCCAACAGATAATAGAATTACAGAAAGAAAATTTCCAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAAGCCAACAGATAATAGAATTACAGAAAGAAAATTTCCAGAAT  541

seq1  TCTAATGTGTTTTAGGCAGAAAATTTGAAGGAGAACCAAATGAATATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGTGTTTTAGGCAGAAAATTTGAAGGAGAACCAAATGAATATTTG  591

seq1  GTTTTGAATTAACCCACTCTTTCTATGTTTATCTATAAGCAATGAGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAATTAACCCACTCTTTCTATGTTTATCTATAAGCAATGAGACAT  641

seq1  AAGTATACCTAGAAAATATTATATAGATGCATATATTTATAAGAACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATACCTAGAAAATATTATATAGATGCATATATTTATAAGAACAGAA  691

seq1  CACTGTAATCAATTAAAAATTTAAATCATTTAAATTATTAGTTGCATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAATCAATTAAAAATTTAAATCATTTAAATTATTAGTTGCATATA  741

seq1  GTTGATACAAATTTCAGCTTTAGACAAGCATGTAAAAATATACTGCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATACAAATTTCAGCTTTAGACAAGCATGTAAAAATATACTGCTTTG  791

seq1  TCCTTTTTAAATATTTTATTTAAAATGTTAATTATGTATGCTTGTGCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAAATATTTTATTTAAAATGTTAATTATGTATGCTTGTGCTTA  841

seq1  TCTGTGTGTAGACTTTGTCCCCATGAATATGGTGCTCTTAGAGGCTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTAGACTTTGTCCCCATGAATATGGTGCTCTTAGAGGCTAGAA  891

seq1  GAAAGCACTGGATCTCCTAGAGCAGAATTC  930
      ||||||||||||||||||||||||||||||
seq2  GAAAGCACTGGATCTCCTAGAGCAGAATTC  921