BAC Information

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BAC

Clone NameB6Ng01-141A01
Chromosome1 (Build37)
Map Location 68,072,317 - 68,073,437
singlet/doubletsinglet
Overlap genenone
Upstream geneLancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141A01.bB6Ng01-141A01.g
ACCDH939583DH939584
length1,2301,116
definitionDH939583|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A01, 5' end.DH939584|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctcttagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgagataggtaaagatcctttccaaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccattaatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattggc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggattgttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctggagtacagttttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaatcgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagaatgggactcgcacaatatgt
actcactgataagtggatattagcccagaaacttaggatacccaagatat
agatacacttgccaaacacatgaaattcagagaacgaagaccaaagtgtg
gacttacccttcttaggaatgggatcaaacacccatagaaaggagtacga
ggacaaattgggagctgtgacgaaagatggaccatctaagtgactgccat
atgcagggatccatccctaatatagctttccaatgtcgaaccttgcttac
ctagcagatttccgtaggaccgaaatagatcttctctgtggacatgtcag
ggcgtcccactatagatggatgtctcacatgagtgatacgaccctatggg
gactagatgtatactctcacggatcgatag
gaattcattgaagagggttttaggcaggatgtacgcacagtgcagttttg
ccttgggggcactatgaatttgaaatctatgactctgtctattaaatagt
aaaggttattgataattgttcataaatgtacttaatattttaaagacatt
aaaagagatatagtaaagtgacatgggctaatgtgttctaccctgtgtgg
cttgaagaacatgaattcatttgtagcctttaaccttagcaagtgaccaa
tcatcctcatttcaagaaaattcaaactttaattctctggttgaaagcac
cagccttttgtcttccaatatattctctttttttcttcagtttaaaaatc
aacctaaccatagtttatgtcaaactgacacaaaccaaaatcatttgaga
ggaaaaaaacctcagttaagaaaatatgtctataagaacaagctataggc
aagctggcaggacattttcttaattagtgatcaatgagagagggcagtgg
cgctatcccagggctggtggtcctgggtcctataaggaaacaggccgagc
aagccatgagtaacaagtcagtaaacagcatcccttcatggcctctacat
cacccctgcaggctcctgttctgtttagctgcaattcagatatcctttga
taatgaactgtaatatagaagtgtaagctgaataaagtctcctcctactc
ccctctcctcttctccctgcccaaactcacctgcataatacccattagaa
aaatgtcatgtgcttttggatgacagtagcaagaatctttctaaatagag
ctagaattctagttcagtgtacacaaatgttaccctctctccatttttta
cattgttccatgtaagctcagatagaaaatgtcaatatctttcatttaca
ttcttcagctcatacaattttaagtagctaaagagattagataacactag
gaagaaactgcaattatttcaaggaattgtaaagctgattcaacagaata
atggggtaaggatgccttaggataccactcatgaatctgccattctctca
agtgtggtggaactcaccataactaaggaggaaggcctagagattttcca
taaatttaaaggttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68072317_68073437
seq2: B6Ng01-141A01.g_71_1186

seq1  GAATTCATTGAAGAGGGTTTTAGGCAGGATGTACGCACAGTGCAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAAGAGGGTTTTAGGCAGGATGTACGCACAGTGCAGTTTTG  50

seq1  CCTTGGGGGCACTATGAATTTGAAATCTATGACTCTGTCTATTAAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGGGCACTATGAATTTGAAATCTATGACTCTGTCTATTAAATAGT  100

seq1  AAAGGTTATTGATAATTGTTCATAAATGTACTTAATATTTTAAAGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTATTGATAATTGTTCATAAATGTACTTAATATTTTAAAGACATT  150

seq1  AAAAGAGATATAGTAAAGTGACATGGGCTAATGTGTTCTACCCTGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGATATAGTAAAGTGACATGGGCTAATGTGTTCTACCCTGTGTGG  200

seq1  CTTGAAGAACATGAATTCATTTGTAGCCTTTAACCTTAGCAAGTGACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAACATGAATTCATTTGTAGCCTTTAACCTTAGCAAGTGACCAA  250

seq1  TCATCCTCATTTCAAGAAAATTCAAACTTTAATTCTCTGGTTGAAAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCATTTCAAGAAAATTCAAACTTTAATTCTCTGGTTGAAAGCAC  300

seq1  CAGCCTTTTGTCTTCCAATATATTCTCTTTTTTTCTTCAGTTTAAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTTGTCTTCCAATATATTCTCTTTTTTTCTTCAGTTTAAAAATC  350

seq1  AACCTAACCATAGTTTATGTCAAACTGACACAAACCAAAATCATTTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAACCATAGTTTATGTCAAACTGACACAAACCAAAATCATTTGAGA  400

seq1  GGAAAAAAACCTCAGTTAAGAAAATATGTCTATAAGAACAAGCTATAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAACCTCAGTTAAGAAAATATGTCTATAAGAACAAGCTATAGGC  450

seq1  AAGCTGGCAGGACATTTTCTTAATTAGTGATCAATGAGAGAGGGCAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGCAGGACATTTTCTTAATTAGTGATCAATGAGAGAGGGCAGTGG  500

seq1  CGCTATCCCAGGGCTGGTGGTCCTGGGTCCTATAAGGAAACAGGCCGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTATCCCAGGGCTGGTGGTCCTGGGTCCTATAAGGAAACAGGCCGAGC  550

seq1  AAGCCATGAGTAACAAGTCAGTAAACAGCATCCCTTCATGGCCTCTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAGTAACAAGTCAGTAAACAGCATCCCTTCATGGCCTCTACAT  600

seq1  CACCCCTGCAGGCTCCTGTTCTGTTTAGCTGCAATTCAGATATCCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTGCAGGCTCCTGTTCTGTTTAGCTGCAATTCAGATATCCTTTGA  650

seq1  TAATGAACTGTAATATAGAAGTGTAAGCTGAATAAAGTCTCCTCCTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACTGTAATATAGAAGTGTAAGCTGAATAAAGTCTCCTCCTACTC  700

seq1  CCCTCTCCTCTTCTCCCTGCCCAAACTCACCTGCATAATACCCATTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCCTCTTCTCCCTGCCCAAACTCACCTGCATAATACCCATTAGAA  750

seq1  AAATGTCATGTGCTTTTGGATGACAGTAGCAAGAATCTTTCTAAATAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCATGTGCTTTTGGATGACAGTAGCAAGAATCTTTCTAAATAGAG  800

seq1  CTAGAATTCTAGTTCAGTGTACACAAATGTTACCC-CCCCCCATTTTTTA  849
      ||||||||||||||||||||||||||||||||||| | | ||||||||||
seq2  CTAGAATTCTAGTTCAGTGTACACAAATGTTACCCTCTCTCCATTTTTTA  850

seq1  CATTGTTCCATGTAAGCCCAGATAGAAAAATGTCAATATCTTTCATTTCA  899
      ||||||||||||||||| ||||||| |||||||||||||||||||||| |
seq2  CATTGTTCCATGTAAGCTCAGATAG-AAAATGTCAATATCTTTCATTT-A  898

seq1  CATTCTTCAGCTCATACAATTTTTAAGTAGCTAAAGAGATTAGATAACAC  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATTCTTCAGCTCATACAA-TTTTAAGTAGCTAAAGAGATTAGATAACAC  947

seq1  TAGGAAGAAACTGCAATTATTTCAAAGAATTGTAAAGCTGATTCAACAGA  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGGAAGAAACTGCAATTATTTCAAGGAATTGTAAAGCTGATTCAACAGA  997

seq1  ATATTGGGGTAAGGATGCCTTAGGATAACCACTCATTGATCTGCCATTCA  1049
      ||| |||||||||||||||||||||| |||||||||  ||||||||||| 
seq2  ATAATGGGGTAAGGATGCCTTAGGAT-ACCACTCATGAATCTGCCATTCT  1046

seq1  CT-AAGTGTTGGTGGGACTCAGCATAGACT-AGGAGGGAGG-CTAAGCAT  1096
      || ||||| |||||| ||||| |||| ||| |||||| ||| |||   ||
seq2  CTCAAGTG-TGGTGGAACTCACCATA-ACTAAGGAGGAAGGCCTAGAGAT  1094

seq1  TTTCCATAGAATTTTAAAAGGTTAT  1121
      |||||||| |||||  |||||||||
seq2  TTTCCATA-AATTT--AAAGGTTAT  1116