BAC Information

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BAC

Clone NameB6Ng01-142O19
Chromosome1 (Build37)
Map Location 67,739,972 - 67,841,699
singlet/doubletdoublet
Overlap genenone
Upstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142O19.bB6Ng01-142O19.g
ACCDH940998DH940999
length1,190457
definitionDH940998|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O19, 5' end.DH940999|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,739,972 - 67,741,158)(67,841,237 - 67,841,699)
sequence
gaattcttactcctctctttcctcctcaatttacaaagttattcgagact
tctttgaagtctgactattcatcataaattcacatatatacatacacaca
tatgcacacacatatatacatatatatgtttatattacctatatatcaca
cacatactatgtgtgtgtgtattacacacatacatatatatttattggtg
atatatatatatatatatgaaaaacctagagaaatgttgacattgtataa
agatagctttctaattatgaatcatacttgtcaatgaaagagtatttata
ttccaaataaaagattgtggctccttatgatcctttaatattaacatatg
taataaaggctttattcattatctaataaagtgaagattattccttacct
aaagaggtaatatgcaaaactgcaccttgtacatatgatttttttcctga
tagtatcaacctgaaagcagcagaagtaggcaaatggctcttattgctct
tgaagggcagccatggctgcttgtccctcacaacttgtcttccaggattg
catgcacaccagacaggaaacactatattaacacaactgtccatttttct
ggtctaaagcctgagaaatattaattctccaaatgacattttaatgagaa
ctattactttgaaactaataagtgatctactatttagtaaaataaggaac
agaaattatgtcaaaacaatagcaacaacaaaacatctgtattctcagaa
tatttgagacctatctagggaaaagactttgagtgattcagctttctctc
aatttcggtctgatagtttattttataagactatgattttagaggtgcat
ccttcactgcttgtacattgttttgtctggttccaaatagtattctttga
aaataatacctaattagagttttgggggttgcttatgtatattatcatat
catctgcaaatagtgacacctttatttcttctttgccaatttgtatcccc
ttgacttttttttgttgtcttaccatcctagtaagcactttgggatacta
catggatagattgggggaggatgtgcatcccttgtctctcagcaagaatt
caggacatcaagtgagaggaatgggttggccattccaagtccaattctga
ccataattgtcctggtcttgagaactgtataaaatggcaa
ctccctaaatctttccctctctactaccatgtcttttcagactttgcagt
gcagttgaatgctttgtctcaaaattgatgctttccttattgctccagtg
cttattttttcgctaccacaattcttcacctgtggggaaataaaacccac
acattcagacccttgtgaagcactctcagtgcggtggttctcattttgtt
taggcaaggatgcattcacacacaagttttttttttttaactgatttgaa
ggaaggtatcaaaacatatggaaacctactactaccttgaaaccaaacta
accagtaccccctggagctcgtgtctctaggtgaatatgtatcagaagat
gacctagttggccatcagtgggaagagagggccattggttttgcaaactt
tatatgccccagtacagagaaacaccagggccaagaagtgggagtggggg
aggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67739972_67741158
seq2: B6Ng01-142O19.b_46_1235

seq1  GAATTCTTACTCCTCTCTTTCCTCCTCAATTTACAAAGTTATTCGAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCCTCTCTTTCCTCCTCAATTTACAAAGTTATTCGAGACT  50

seq1  TCTTTGAAGTCTGACTATTCATCATAAATTCACATATATACATACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAGTCTGACTATTCATCATAAATTCACATATATACATACACACA  100

seq1  TATGCACACACATATATACATATATATGTTTATATTACCTATATATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACACATATATACATATATATGTTTATATTACCTATATATCACA  150

seq1  CACATACTATGTGTGTGTGTATTACACACATACATATATATTTATTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTATGTGTGTGTGTATTACACACATACATATATATTTATTGGTG  200

seq1  ATATATATATATATATATGAAAAACCTAGAGAAATGTTGACATTGTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATGAAAAACCTAGAGAAATGTTGACATTGTATAA  250

seq1  AGATAGCTTTCTAATTATGAATCATACTTGTCAATGAAAGAGTATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCTTTCTAATTATGAATCATACTTGTCAATGAAAGAGTATTTATA  300

seq1  TTCCAAATAAAAGATTGTGGCTCCTTATGATCCTTTAATATTAACATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATAAAAGATTGTGGCTCCTTATGATCCTTTAATATTAACATATG  350

seq1  TAATAAAGGCTTTATTCATTATCTAATAAAGTGAAGATTATTCCTTACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGGCTTTATTCATTATCTAATAAAGTGAAGATTATTCCTTACCT  400

seq1  AAAGAGGTAATATGCAAAACTGCACCTTGTACATATGATTTTTTTCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTAATATGCAAAACTGCACCTTGTACATATGATTTTTTTCCTGA  450

seq1  TAGTATCAACCTGAAAGCAGCAGAAGTAGGCAAATGGCTCTTATTGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCAACCTGAAAGCAGCAGAAGTAGGCAAATGGCTCTTATTGCTCT  500

seq1  TGAAGGGCAGCCATGGCTGCTTGTCCCTCACAACTTGTCTTCCAGGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGCAGCCATGGCTGCTTGTCCCTCACAACTTGTCTTCCAGGATTG  550

seq1  CATGCACACCAGACAGGAAACACTATATTAACACAACTGTCCATTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACCAGACAGGAAACACTATATTAACACAACTGTCCATTTTTCT  600

seq1  GGTCTAAAGCCTGAGAAATATTAATTCTCCAAATGACATTTTAATGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAAGCCTGAGAAATATTAATTCTCCAAATGACATTTTAATGAGAA  650

seq1  CTATTACTTTGAAACTAATAAGTGATCTACTATTTAGTAAAATAAGGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTTTGAAACTAATAAGTGATCTACTATTTAGTAAAATAAGGAAC  700

seq1  AGAAATTATGTCAAAACAATAGCAACAACAAAACATCTGTATTCTCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTATGTCAAAACAATAGCAACAACAAAACATCTGTATTCTCAGAA  750

seq1  TATTTGAGACCTATCTAGGGAAAAGACTTTGAGTGATTCAGCTTTCTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGACCTATCTAGGGAAAAGACTTTGAGTGATTCAGCTTTCTCTC  800

seq1  AATTTCGGTCTGATAGTTTATTTTATAAGACTATGATTTTAGAGGTGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCGGTCTGATAGTTTATTTTATAAGACTATGATTTTAGAGGTGCAT  850

seq1  CCTTCACTGCTTGTACATTGTTTTGTCTGGTTCCAAATAGTATTCTTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTGCTTGTACATTGTTTTGTCTGGTTCCAAATAGTATTCTTTGA  900

seq1  AAATAATACCTAATTAGAGTTTTGGGGGTTGCTTATGTATATTATCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATACCTAATTAGAGTTTTGGGGGTTGCTTATGTATATTATCATAT  950

seq1  CATCTGCAAATAGTGACACCTTTATTTCTTCTTTGCCAATTTGTATCCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCAAATAGTGACACCTTTATTTCTTCTTTGCCAATTTGTATCCCC  1000

seq1  TTGACCTCTTTTTGTTGTCTTACCATCCTAGTAAGCACTTT-GGATACTA  1049
      ||||| | ||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGACTTTTTTTTGTTGTCTTACCATCCTAGTAAGCACTTTGGGATACTA  1050

seq1  CATTGAATAGATATGGGGAGAGTGGGCAT-CCTTGTCTC-CAGCAAGAAT  1097
      || || ||||||  ||||||  || |||| ||||||||| ||||||||||
seq2  CA-TGGATAGATTGGGGGAGGATGTGCATCCCTTGTCTCTCAGCAAGAAT  1099

seq1  TCAGGACATCAAGT--GAGGAATGGGTT-GCCATCCCACAGTCAAAATTC  1144
      ||||||||||||||  |||||||||||| ||||| ||| ||||  |||||
seq2  TCAGGACATCAAGTGAGAGGAATGGGTTGGCCATTCCA-AGTC-CAATTC  1147

seq1  TGACCCATAATTGTTCCTGTCTGAAAGAACTG-AT-GAATGGCAA  1187
      ||| |||||||||| |  ||||   ||||||| ||  ||||||||
seq2  TGA-CCATAATTGTCCTGGTCT-TGAGAACTGTATAAAATGGCAA  1190

seq1: chr1_67841237_67841699
seq2: B6Ng01-142O19.g_68_530 (reverse)

seq1  CCCTCCTCCCCCACTCCCACTTCTTGGCCCTGGTGTTTCTCTGTACTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCCCCCACTCCCACTTCTTGGCCCTGGTGTTTCTCTGTACTGGG  50

seq1  GCATATAAAGTTTGCAAAACCAATGGCCCTCTCTTCCCACTGATGGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAAAGTTTGCAAAACCAATGGCCCTCTCTTCCCACTGATGGCCAA  100

seq1  CTAGGTCATCTTCTGATACATATTCACCTAGAGACACGAGCTCCAGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCATCTTCTGATACATATTCACCTAGAGACACGAGCTCCAGGGGG  150

seq1  TACTGGTTAGTTTGGTTTCAAGGTAGTAGTAGGTTTCCATATGTTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTAGTTTGGTTTCAAGGTAGTAGTAGGTTTCCATATGTTTTGAT  200

seq1  ACCTTCCTTCAAATCAGTTAAAAAAAAAAAACTTGTGTGTGAATGCATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTTCAAATCAGTTAAAAAAAAAAAACTTGTGTGTGAATGCATCC  250

seq1  TTGCCTAAACAAAATGAGAACCACCGCACTGAGAGTGCTTCACAAGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAAACAAAATGAGAACCACCGCACTGAGAGTGCTTCACAAGGGTC  300

seq1  TGAATGTGTGGGTTTTATTTCCCCACAGGTGAAGAATTGTGGTAGCGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGTGGGTTTTATTTCCCCACAGGTGAAGAATTGTGGTAGCGAAA  350

seq1  AAATAAGCACTGGAGCAATAAGGAAAGCATCAATTTTGAGACAAAGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCACTGGAGCAATAAGGAAAGCATCAATTTTGAGACAAAGCATT  400

seq1  CAACTGCACTGCAAAGTCTGAAAAGACATGGTAGTAGAGAGGGAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCACTGCAAAGTCTGAAAAGACATGGTAGTAGAGAGGGAAAGATT  450

seq1  TAGGGAGGAATTC  463
      |||||||||||||
seq2  TAGGGAGGAATTC  463