BAC Information

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BAC

Clone NameB6Ng01-144P05
Chromosome1 (Build37)
Map Location 20,667,706 - 20,668,112
singlet/doubletsinglet
Overlap genenone
Upstream genePkhd1
Downstream geneIl17a, Il17f, Mcm3, Paqr8, Efhc1, Tram2, LOC100040291, Tmem14a, Gsta3, EG632802, EG241041, LOC100040309, Ndg1, BC099381, LOC100040319, AU024076, Kcnq5, D1Mgi28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144P05.bB6Ng01-144P05.g
ACCDH942492DH942493
length4011,153
definitionDH942492|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P05, 5' end.DH942493|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctgtcaggaaatagagaagcaagctaagaggagaagaagggtcccgaac
tggctcatagctctgtgagggctgcttcatacaatcaacaaacaataata
actttttaataataataaaaagtaacttttttcagataagttttatatga
caggatcattttcaatgtcttccctatgccagctctttgaatcctcatat
ctatgtgaaactgttttacccgcttgtttctggttttacacatgaagata
tggctctagaagtgaattaaattacttatatgcaaatggaaattattaaa
aaaaaagaaaaatcaaaccagattggaagaacagccttggatcagtccag
gctttctttatgagagcttggaaggtaagaggtgttgggaaggaagggag
g
gaattctcacttgaggaataccgaatggcagagtagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggaaaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttatcatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgtgatga
aaggatggaccatgtagagactgccatatccaggatccaccccataatca
gcatccaaacactgacaccattgcatacactagcagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgctggggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggatcacaggctctcaatg
gaggagctagagaaagtacccaaaggagctaaaggtctgcaccttatagt
gaacaacatatgaactacagtatcccgagctctgactctactgcatatgt
atcaaagatgacctagtcgcatcactgtaagaaaaggccatgaccgcact
taatgccagtacagggaacacatgccaaggggagtggtaagataggggat
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_20667706_20668112
seq2: B6Ng01-144P05.b_47_453 (reverse)

seq1  CCTCCCTTCCTTCCCAACACCTCTTACCTTCCAAGCTCTCATAAAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCCTTCCCAACACCTCTTACCTTCCAAGCTCTCATAAAGAAAG  50

seq1  CCTGGACTGATCCAAGGCTGTTCTTCCAATCTGGTTTGATTTTTCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTGATCCAAGGCTGTTCTTCCAATCTGGTTTGATTTTTCTTTTT  100

seq1  TTTTAATAATTTCCATTTGCATATAAGTAATTTAATTCACTTCTAGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATTTCCATTTGCATATAAGTAATTTAATTCACTTCTAGAGCC  150

seq1  ATATCTTCATGTGTAAAACCAGAAACAAGCGGGTAAAACAGTTTCACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCATGTGTAAAACCAGAAACAAGCGGGTAAAACAGTTTCACATA  200

seq1  GATATGAGGATTCAAAGAGCTGGCATAGGGAAGACATTGAAAATGATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAGGATTCAAAGAGCTGGCATAGGGAAGACATTGAAAATGATCCT  250

seq1  GTCATATAAAACTTATCTGAAAAAAGTTACTTTTTATTATTATTAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATAAAACTTATCTGAAAAAAGTTACTTTTTATTATTATTAAAAAG  300

seq1  TTATTATTGTTTGTTGATTGTATGAAGCAGCCCTCACAGAGCTATGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTGTTTGTTGATTGTATGAAGCAGCCCTCACAGAGCTATGAGCC  350

seq1  AGTTCGGGACCCTTCTTCTCCTCTTAGCTTGCTTCTCTATTTCCTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGGGACCCTTCTTCTCCTCTTAGCTTGCTTCTCTATTTCCTGACAG  400

seq1  AGAATTC  407
      |||||||
seq2  AGAATTC  407