BAC Information

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BAC

Clone NameB6Ng01-145H17
Chromosome1 (Build37)
Map Location 98,008,616 - 98,157,467
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145H17.bB6Ng01-145H17.g
ACCDH942873DH942874
length7061,095
definitionDH942873|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H17, 5' end.DH942874|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,008,616 - 98,009,317)(98,156,348 - 98,157,467)
sequence
gaattcctgtttcatattgctttgttagggcatattgatttctttgtctt
acttgtcttttgcatgagtattatagtttgcatttatatactttatgggt
tttgcgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtatgtgtgcacaag
tgtgtgtatgtatcttttttattattactattttttgctttaactccgtg
aaaacctttttttttaaaaattagatattttcctcgattacattttcaat
gctatcccaaagtcccccatacccaccccacccaatcgcctacccaccca
ctccccctttttggccctggggttcctctgtactggggcatataaagttt
gcaagtccaatgagcctctctttgcagtgatggccgacaaggctatcttt
tgattcatatgcagctagagaaaagagctccagggtactaggttagttca
taatgttgttccacctatagggttgcagttccctttagctccttggttac
tttctctagctcctccattgggggccctgtgatccatccaatagctgact
gtgatcatccacttctgtgtttgctaggccccggcatagtctcacaagag
acagctatatctggggtcctttcagcaaaatcttgctagtgtatgcaatg
gtgtcagcggttggaaagctgatttatgggatggatcccctgcatatggc
aatcac
gaattcacttgcatatctttaaattcacctgagattgttttggaaaacaa
atctttaaaaagtcagccagtgatttctcagtagatcctaactgttttaa
ttcttttaaaatccaagttaaagaatcatgttaagttatgaaacttttca
cttttgagttttaacaactataataattgtccaaatcatgggttaaccta
actgattttatctgaaagtattctatttctatgaaatatacaacaagtcc
tggaatacatgtaaaacaggttagtatttatttagtagttgtacccacaa
atgcatgttatttcatggatattcttcaataaataaaattatttgatttt
ataaccaattttctttaaatcttattttgctttcagtaagctttacaggg
atttctaagtttgccttctttcgaaaaaataattctaatttatgcaacta
tataaaaaatgtagtctaaatttattgtggacatcaaaagacaaataaag
gaatgttaaaatcatgaggactgtatgaggttgtatacattgtgtttttc
aaaataactgaagtctactgagaccataagacaataatagtttttgtttc
tgatggtagagaaagagcaaaactatttaacataccatcatccttgaatg
cattctgattttaagatttctgttaccttggttcttgaattagtggccac
tggcagtgttttttctcttgcaatattttttatctgaataaaagagaaat
gaagatgaagtatgatgaaagataacatggcatcacaggctctattttca
tttataattctgaaaagaatctggtacagttgacctagaattagtgtgga
agatgttatgaactggaagagatataatcccttctcttcattagcataga
acacaattagtgcagactgatggcacatcattataatagtatccttaatg
gacaatatgacagataacaggattaacttttcatttctatgcatatattc
aaaacatacatcatctctactcttgtacccatcactgtattgatgaataa
cattagcagattgaatacttacatataaaaattcgaaaaatgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98008616_98009317
seq2: B6Ng01-145H17.b_45_750

seq1  GAATTCCTGTTTCATATTGCTTTGTTAGGGCATATTGATTTCTTTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTCATATTGCTTTGTTAGGGCATATTGATTTCTTTGTCTT  50

seq1  ACTTGTCTTTTGCATGAGTATTATAGTTTGCATTTATATACTTTATGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCTTTTGCATGAGTATTATAGTTTGCATTTATATACTTTATGGGT  100

seq1  TTTGCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTATGTGTGCACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTATGTGTGCACAAG  150

seq1  TGTGTGTATGTATCTTTTTTATTATTACTATTTTTTGCTTTAACTCCGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGTATCTTTTTTATTATTACTATTTTTTGCTTTAACTCCGTG  200

seq1  AAAACCTTTTTTTTTAAAAATTAGATATTTTCCTCGATTACATTTTCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTTTTTTTTAAAAATTAGATATTTTCCTCGATTACATTTTCAAT  250

seq1  GCTATCCCAAAGTCCCCCATACCCACCCCACCCAATCGCCTACCCACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCAAAGTCCCCCATACCCACCCCACCCAATCGCCTACCCACCCA  300

seq1  CTCCCCCTTTTTGGCCCTGGGGTTCCTCTGTACTGGGGCATATAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTTTTTGGCCCTGGGGTTCCTCTGTACTGGGGCATATAAAGTTT  350

seq1  GCAAGTCCAATGAGCCTCTCTTTGCAGTGATGGCCGACAAGGCTATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCCAATGAGCCTCTCTTTGCAGTGATGGCCGACAAGGCTATCTTT  400

seq1  TGATTCATATGCAGCTAGAGAAAAGAGCTCCAGGGTACTAGGTTAGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATATGCAGCTAGAGAAAAGAGCTCCAGGGTACTAGGTTAGTTCA  450

seq1  TAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTGGTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTGGTTAC  500

seq1  TTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACT  550

seq1  GTGATCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAG  600

seq1  ACAGCTATATCT-GGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATG  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATATCTGGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATG  650

seq1  GTGTCAGCGTTTGG-AAGCTGA-TTATGGGATGGAT-CCCTGCATATGGC  696
      ||||||||| |||| ||||||| ||||||||||||| |||||||||||||
seq2  GTGTCAGCGGTTGGAAAGCTGATTTATGGGATGGATCCCCTGCATATGGC  700

seq1  AATCAC  702
      ||||||
seq2  AATCAC  706

seq1: chr1_98156348_98157467
seq2: B6Ng01-145H17.g_64_1158 (reverse)

seq1  GTTCATTTTTTTTGGAAATATTTTATATGT-AGTATTTCAAATTCTGCTA  49
      |||||   ||||| |||   |||||||||| |||| |||||  |||||| 
seq2  GTTCA---TTTTTCGAA--TTTTTATATGTAAGTA-TTCAA--TCTGCT-  41

seq1  AATGTTTATTCATCAAATACAGGTTGAATGGGGTACAAAGAGTAGAGATG  99
      |||| ||||||||| |||||||  |||   |||||| |||||||||||||
seq2  AATG-TTATTCATC-AATACAG--TGA--TGGGTAC-AAGAGTAGAGATG  84

seq1  ATGTATGTTTTTGAAATATATGGCATAGAAAATGAAAAAGTTAATCCTGT  149
      |||||||||||   ||||||| |||||| ||||| |||||||||||||| 
seq2  ATGTATGTTTT--GAATATAT-GCATAG-AAATG-AAAAGTTAATCCTG-  128

seq1  TTATCTTGTCATAATTGTCCATTAAGGATACTATTAT-ATGATGTGGCCA  198
      ||||| |||||| |||||||||||||||||||||||| ||||||| ||||
seq2  TTATC-TGTCAT-ATTGTCCATTAAGGATACTATTATAATGATGT-GCCA  175

seq1  TCAGTCCTGCACTAATTGTTGTTCTATGCTAATGAAGAGAAGGGATTATA  248
      ||||| |||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAGT-CTGCACTAATTG-TGTTCTATGCTAATGAAGAGAAGGGATTATA  223

seq1  TCTCTTCCAGTTCATAACATCTTCCACACTAATTCTAGGTCAACTGTACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCAGTTCATAACATCTTCCACACTAATTCTAGGTCAACTGTACC  273

seq1  AGATTCTTTTCAGAATTATAAATGAAAATAGAGCCTGTGATGCCATGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTTTCAGAATTATAAATGAAAATAGAGCCTGTGATGCCATGTTA  323

seq1  TCTTTCATCATACTTCATCTTCATTTCTCTTTTATTCAGATAAAAAATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATCATACTTCATCTTCATTTCTCTTTTATTCAGATAAAAAATAT  373

seq1  TGCAAGAGAAAAAACACTGCCAGTGGCCACTAATTCAAGAACCAAGGTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGAAAAAACACTGCCAGTGGCCACTAATTCAAGAACCAAGGTAA  423

seq1  CAGAAATCTTAAAATCAGAATGCATTCAAGGATGATGGTATGTTAAATAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCTTAAAATCAGAATGCATTCAAGGATGATGGTATGTTAAATAG  473

seq1  TTTTGCTCTTTCTCTACCATCAGAAACAAAAACTATTATTGTCTTATGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCTTTCTCTACCATCAGAAACAAAAACTATTATTGTCTTATGGT  523

seq1  CTCAGTAGACTTCAGTTATTTTGAAAAACACAATGTATACAACCTCATAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGACTTCAGTTATTTTGAAAAACACAATGTATACAACCTCATAC  573

seq1  AGTCCTCATGATTTTAACATTCCTTTATTTGTCTTTTGATGTCCACAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCATGATTTTAACATTCCTTTATTTGTCTTTTGATGTCCACAATA  623

seq1  AATTTAGACTACATTTTTTATATAGTTGCATAAATTAGAATTATTTTTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGACTACATTTTTTATATAGTTGCATAAATTAGAATTATTTTTTC  673

seq1  GAAAGAAGGCAAACTTAGAAATCCCTGTAAAGCTTACTGAAAGCAAAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGCAAACTTAGAAATCCCTGTAAAGCTTACTGAAAGCAAAATA  723

seq1  AGATTTAAAGAAAATTGGTTATAAAATCAAATAATTTTATTTATTGAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAGAAAATTGGTTATAAAATCAAATAATTTTATTTATTGAAGA  773

seq1  ATATCCATGAAATAACATGCATTTGTGGGTACAACTACTAAATAAATACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATGAAATAACATGCATTTGTGGGTACAACTACTAAATAAATACT  823

seq1  AACCTGTTTTACATGTATTCCAGGACTTGTTGTATATTTCATAGAAATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTTTACATGTATTCCAGGACTTGTTGTATATTTCATAGAAATAG  873

seq1  AATACTTTCAGATAAAATCAGTTAGGTTAACCCATGATTTGGACAATTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTCAGATAAAATCAGTTAGGTTAACCCATGATTTGGACAATTAT  923

seq1  TATAGTTGTTAAAACTCAAAAGTGAAAAGTTTCATAACTTAACATGATTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTGTTAAAACTCAAAAGTGAAAAGTTTCATAACTTAACATGATTC  973

seq1  TTTAACTTGGATTTTAAAAGAATTAAAACAGTTAGGATCTACTGAGAAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTGGATTTTAAAAGAATTAAAACAGTTAGGATCTACTGAGAAAT  1023

seq1  CACTGGCTGACTTTTTAAAGATTTGTTTTCCAAAACAATCTCAGGTGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTGACTTTTTAAAGATTTGTTTTCCAAAACAATCTCAGGTGAAT  1073

seq1  TTAAAGATATGCAAGTGAATTC  1120
      ||||||||||||||||||||||
seq2  TTAAAGATATGCAAGTGAATTC  1095