BAC Information

Click to search

BAC

Clone NameB6Ng01-145M07
Chromosome1 (Build37)
Map Location 115,031,176 - 115,032,310
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626897, LOC666615, LOC666635
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145M07.bB6Ng01-145M07.g
ACCDH943084DH943085
length9601,115
definitionDH943084|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M07, 5' end.DH943085|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtctttccaagacttttaccatgaagagtgttggattttgt
taaatgctgtctcaacatctaatgagatgatcatcagtttttttctctga
gtttgtttatatagtgggttatgttgatggatttccatatattgaaacat
ccctgcattcctaggataaatcctacttgatcgtgatggataattgtttt
tatgtgttcttggattcagtttgggataattttattgagtatttttgcat
tgatattcatcagggaaattagtctgacatcctctttcattgtcgtgtct
ttgtgcggtttagttataactgtaattgtgacttcataggatgaattgtg
tattgttacttctgtttctattttgtgggataatttgaagagagttggtg
ttaggttttctttgaaggtctgatagaaatctgcactaaaaccatcttac
tttaggggatatggcactgtttggatggtttatttgactctgatttaact
ttaggacctggcatctgtgtagaaaattgcctatttcatccacattttcc
agttttgttgaattcagtcttttctagtaggatctgatgattttttgaat
ttccaagtttcttgtgttatgtctctgctgtgggaaatattaaaaaatga
acctgcacgttcatgtgcttgtgcctctgcctccatgacctggctggcca
ggcactagagggtaattgtcaatatgtttttatatgatggagactctgat
tcagagctccaaaatctctccagctagctcactaagttcccactggagag
tcactaccaggccaatcccatgcttcaaattacccatgggcctttttgat
gtctcttagggaacccatgctttgctgcataatttctctctgaacccgga
aaactgtcatgtaaggaaacacacacaacttaatcgaaagaatgatcatt
actgggcata
gaattcatagtcaggaagctgagatgaatggaggctgctattctagacca
aagaatggagaagacctcctcacagggagggtcttctaacctcagttaac
ccaatctataaacagacatgaccagagagatttggcttgtagataaatct
agatcccctcaagttagcaatattaaccaaaactttgccattatttctta
actgatatttatcatttagtcttcactttaatgttacaccttaaatattt
tcccaattatctaaaattcaacatcctcattcatgtactatatactatga
cagttccatgtgaactacacagcacatcacattttataaggtccaaggtt
cttaagaaccatttgaaatattctgctcacttattagtttaattagtatt
tttctctctccttcccacatcaacattactgctggcttcatgagcacata
tattttccctattgttgaacttgcattttctaagctgaagttggaccctt
ggcagctgtttaatagatacttattttataaatgaacaaatccatctaat
agggactgaatgaattgtttaaaagctaataaaagaaagacacatactaa
ctaaacttaatccattttcttcactcaaaattacattagatggccatagt
aaatgtaaagatcttggcctgcaagcaataaaatttgagttgtatctcta
aaatatacattaaaagcttgaaatagagttatatgattataattccagca
atgtagaagtaaagacaggtagatcattaaggcacactggctaggcaact
tattattttctgtgttagggagagtcttggtctcaaaaatgaaaatagcc
catctagaaaattaccaaggttgagctttggttttcacacaaacccctgt
tcacatacatacatatacaaaagcaaatttatatggtatatggtccccct
agagatagacttgatgccattacagtagaatcaaatgactgagcataaat
atgagcgatttacaaaatactctggatgcttgaccagagccattgataca
agagaacggaccagaccactgtgatttagtctttgataagactaatgtgt
atgtgaagactaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115031176_115032310
seq2: B6Ng01-145M07.g_68_1182

seq1  GAATTCATAGTCAGGAAGCTGAGATGAATGGAGGCTGCTATTCTAGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTCAGGAAGCTGAGATGAATGGAGGCTGCTATTCTAGACCA  50

seq1  AAGAATGGAGAAGACCTCCTCACAGGGAGGGTCTTCTAACCTCAGTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGAGAAGACCTCCTCACAGGGAGGGTCTTCTAACCTCAGTTAAC  100

seq1  CCAATCTATAAACAGACATGACCAGAGAGATTTGGCTTGTAGATAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTATAAACAGACATGACCAGAGAGATTTGGCTTGTAGATAAATCT  150

seq1  AGATCCCCTCAAGTTAGCAATATTAACCAAAACTTTGCCATTATTTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCCTCAAGTTAGCAATATTAACCAAAACTTTGCCATTATTTCTTA  200

seq1  ACTGATATTTATCATTTAGTCTTCACTTTAATGTTACACCTTAAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATTTATCATTTAGTCTTCACTTTAATGTTACACCTTAAATATTT  250

seq1  TCCCAATTATCTAAAATTCAACATCCTCATTCATGTACTATATACTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTATCTAAAATTCAACATCCTCATTCATGTACTATATACTATGA  300

seq1  CAGTTCCATGTGAACTACACAGCACATCACATTTTATAAGGTCCAAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCATGTGAACTACACAGCACATCACATTTTATAAGGTCCAAGGTT  350

seq1  CTTAAGAACCATTTGAAATATTCTGCTCACTTATTAGTTTAATTAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAACCATTTGAAATATTCTGCTCACTTATTAGTTTAATTAGTATT  400

seq1  TTTCTCTCTCCTTCCCACATCAACATTACTGCTGGCTTCATGAGCACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTCCTTCCCACATCAACATTACTGCTGGCTTCATGAGCACATA  450

seq1  TATTTTCCCTATTGTTGAACTTGCATTTTCTAAGCTGAAGTTGGACCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCCTATTGTTGAACTTGCATTTTCTAAGCTGAAGTTGGACCCTT  500

seq1  GGCAGCTGTTTAATAGATACTTATTTTATAAATGAACAAATCCATCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTGTTTAATAGATACTTATTTTATAAATGAACAAATCCATCTAAT  550

seq1  AGGGACTGAATGAATTGTTTAAAAGCTAATAAAAGAAAGACACATACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGAATGAATTGTTTAAAAGCTAATAAAAGAAAGACACATACTAA  600

seq1  CTAAACTTAATCCATTTTCTTCACTCAAAATTACATTAGATGGCCATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTAATCCATTTTCTTCACTCAAAATTACATTAGATGGCCATAGT  650

seq1  AAATGTAAAGATCTTGGCCTGCAAGCAATAAAATTTGAGTTGTATCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAAGATCTTGGCCTGCAAGCAATAAAATTTGAGTTGTATCTCTA  700

seq1  AAATATACATTAAAAGCTTGAAATAGAGTTATATGATTATAATTCCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACATTAAAAGCTTGAAATAGAGTTATATGATTATAATTCCAGCA  750

seq1  ATGTAGAAGTAAAGACAGGTAGATCATTAAGGCACACTGGCTAGGCAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAAGTAAAGACAGGTAGATCATTAAGGCACACTGGCTAGGCAACT  800

seq1  TATTATTTTCTGTGTTAGGGAGAGTCTTGGTCTCAAAAAATGAAAATAGC  850
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TATTATTTTCTGTGTTAGGGAGAGTCTTGGTCTC-AAAAATGAAAATAG-  848

seq1  CCCATCTAGAAAAATTACCAAAGGTTGAGCTTTGGTTTTTCACACAAACC  900
      ||||||||| ||||||||| ||||||||||||||| ||||||||||||||
seq2  CCCATCTAG-AAAATTACC-AAGGTTGAGCTTTGG-TTTTCACACAAACC  895

seq1  CCTGTTCACATACATACATATACAAAAGCAAAATTTATATGGTATATGGT  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTGTTCACATACATACATATACAAAAGC-AAATTTATATGGTATATGGT  944

seq1  CACACCTAGAGATAGACTTGATGCCATTACAGTAGAATCAAAATGACTGA  1000
      | | ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  C-CCCCTAGAGATAGACTTGATGCCATTACAGTAGAATC-AAATGACTGA  992

seq1  GCATAAAATAATGAGCGATTTACAAAATACTCTGGATGCTTGACCAGAGC  1050
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAA--TATGAGCGATTTACAAAATACTCTGGATGCTTGACCAGAGC  1040

seq1  ACATTGAATAACAAGAGAAACAGAACAAGACACACTGTGATTTAGTCTTT  1100
       ||||||   |||||||||   | || |||| ||||||||||||||||||
seq2  -CATTGA--TACAAGAGAA--CGGACCAGAC-CACTGTGATTTAGTCTTT  1084

seq1  GATAAAGACTAAATGTGTATGTAGAAGAACTAACC  1135
      ||| |||||| ||||||||||| |||| |||||||
seq2  GAT-AAGACT-AATGTGTATGT-GAAG-ACTAACC  1115