BAC Information

Click to search

BAC

Clone NameB6Ng01-145P04
Chromosome1 (Build37)
Map Location 148,290,348 - 148,291,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571
Downstream geneB830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P04.bB6Ng01-145P04.g
ACCDH943218DH943219
length1,1771,118
definitionDH943218|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P04, 5' end.DH943219|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaagggctgagaagcacttgaaaaaatc
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
actacctcacagcagtcagaatggctaggatcaaaaattcatgtgacagc
agatgctggatgtggagaaagaggaacattcctccattgctggtgagatt
gcaagcttgtataaccactctggaaatcagtctggcagttcctcagaaaa
ctggacatagtactaacatagtagatccagcaatacctctcctgggcata
tacccagaagatgttccaactggtaataaggacacatgctccattatgtt
catagcagccctatttataatagccagaatctggaaagaacacagatgtc
cctcaacagaggaatggatacagaaaatgtggtacatttacacaatggag
tactactcagctattaaaaacaatgaatttatgaaattcttgggcaaatg
gatatatctggagaatatcatcctgagtgaggtaaaccaatcacaaaaga
agtcacttgatatgcactcactgataagtggatattagcccagaaaccta
gaatacccaagatacaatttccaaaacacaagaaaatcaagaaggaagat
caacatgtggatacttcattcatccctagaatagggaataaaatatccat
gaaagaagttgcagagacaaagcttggagctaagacgaaaagatggacca
tccagagactgccccacctgggggtccttcccataattagccaccaaact
cagacactactgcatacaccagcaagattttgctgaaaggaccctgatat
agctgtctcctgtgaggctttgccattgcctggcaaatacagaagtggat
gcttacagtcatctataggatgggaacacagggcccccaatgtagaagct
agagaagtacccagagctgaaggggtctgcaaccctatagtagacacata
tggactaatcagtaccctcagaattcatgttctctagctttatgtagcag
tagatgctagtgcatcatgggagagaggaccctgatctagcaacttatat
gcctcagttcggagaagcagggctaaacatgtgaggagtggggtgaatag
caggcaagatggggggtatgagggggc
gaattcataaatttgaggagttggaggcaccgggtgagttgaaaaaggca
tagattatgatgtaaatgatataagtacataatttacatataaaactctc
aaatgatacaataaaatacatttaaaattatagatttacacatacacaga
aggcatgaaaaattccttccagtgaacaaattattcagctttaaacttct
cattccatgtgctcaaatactaagtccaaattcaatccattcaccattgc
tatgtgttaatctctcttatgaagagagtctgtggattcataagtccata
tagccttttcttttcccacctaaattttaacaatggcttctgttcatttc
tgaagataaagaaaacatttagtttatattatgcttagaaagcaagtttc
tttgacttttaagtaagggaatgaaactagagtcttacaatggttttaga
atctttcagaaaaatacaaaaggaaaaaaaattagtttggagtctaaggc
tccagtgacaaattgtataacacacacacaaacacacacacatatatgtg
tatatatgtatatatgtatattaatccattactcaatacaacatttgtac
ctcaattttaaatggattcctgagacaatattttggtcataagtggctat
taaaattagatgaagaccaaagtgtggacactttgccccttcttagaatt
gggaacaaaacacccatggaaggagttacagagacaaagtttggagctga
gacaacaggatggaccatctagagactgccatatccagggatccatccca
taatcagcctccaaacgctgacaccattgcatacactagcaagactttgc
tgaaaggaccctgatatagcgctgtctcttgtgagactatgcctgggcct
agcaaacacagaagtggatgctcacagtcagctattggttggatcacagg
tccccaatggagagctagagaaagtacccaaggagctgaaggactgcacc
ctatagtggaataacaatatgactacagtaccccggagctctgactctag
ctgcatatgtatcaaaagatgcctatttgcctactgcaagagcggcccat
cggtcatgcaaactttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148290348_148291480
seq2: B6Ng01-145P04.g_70_1187 (reverse)

seq1  ATAAAGTTTGCATGACCGATGGGCCGCTCTTTGCAGTTATGGCAGAATAG  50
      ||||||||||||||||||||||||||||| |||||||   |||| |||||
seq2  ATAAAGTTTGCATGACCGATGGGCCGCTC-TTGCAGT--AGGCA-AATAG  46

seq1  GCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGG  100
      | ||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  G-CATCTTTTGATACATATGCAGCTAGAGTC-AGAGCTCCGGGGTACTG-  93

seq1  TTAGTTCATATTGTTATTCCACCTATAGGGTTGCAGTTCCCTTCAGCTCC  150
       ||| |||||||||||||||| |||||||| ||||||  |||||||||||
seq2  -TAG-TCATATTGTTATTCCA-CTATAGGG-TGCAGT--CCTTCAGCTCC  137

seq1  TTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCAACCAAT  200
      ||||||||||||||||||| ||||||| |||| |||||||||||||||||
seq2  TTGGGTACTTTCTCTAGCT-CTCCATT-GGGGACCTGTGATCCAACCAAT  185

seq1  AGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCAGGCATAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCAGGCATAGTCT  235

seq1  CACAAGAGACAGCGCTATATCAGGGTCCTTTCAGCAAAGTCTTGCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGACAGCGCTATATCAGGGTCCTTTCAGCAAAGTCTTGCTAGTG  285

seq1  TATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGGATGGATCCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGGATGGATCCCTGGA  335

seq1  TATGGCAGTCTCTAGATGGTCCATCCTGTTGTCTCAGCTCCAAACTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAGTCTCTAGATGGTCCATCCTGTTGTCTCAGCTCCAAACTTTGT  385

seq1  CTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCA  435

seq1  AAGTGTCCACACTTTGGTCTTCATCTAATTTTAATAGCCACTTATGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCACACTTTGGTCTTCATCTAATTTTAATAGCCACTTATGACCA  485

seq1  AAATATTGTCTCAGGAATCCATTTAAAATTGAGGTACAAATGTTGTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGTCTCAGGAATCCATTTAAAATTGAGGTACAAATGTTGTATTG  535

seq1  AGTAATGGATTAATATACATATATACATATATACACATATATGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGATTAATATACATATATACATATATACACATATATGTGTGTGT  585

seq1  GTTTGTGTGTGTGTTATACAATTTGTCACTGGAGCCTTAGACTCCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTGTGTGTTATACAATTTGTCACTGGAGCCTTAGACTCCAAACT  635

seq1  AATTTTTTTTCCTTTTGTATTTTTCTGAAAGATTCTAAAACCATTGTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTCCTTTTGTATTTTTCTGAAAGATTCTAAAACCATTGTAAG  685

seq1  ACTCTAGTTTCATTCCCTTACTTAAAAGTCAAAGAAACTTGCTTTCTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGTTTCATTCCCTTACTTAAAAGTCAAAGAAACTTGCTTTCTAAG  735

seq1  CATAATATAAACTAAATGTTTTCTTTATCTTCAGAAATGAACAGAAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATAAACTAAATGTTTTCTTTATCTTCAGAAATGAACAGAAGCCA  785

seq1  TTGTTAAAATTTAGGTGGGAAAAGAAAAGGCTATATGGACTTATGAATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAAATTTAGGTGGGAAAAGAAAAGGCTATATGGACTTATGAATCC  835

seq1  ACAGACTCTCTTCATAAGAGAGATTAACACATAGCAATGGTGAATGGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTCTCTTCATAAGAGAGATTAACACATAGCAATGGTGAATGGATT  885

seq1  GAATTTGGACTTAGTATTTGAGCACATGGAATGAGAAGTTTAAAGCTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGGACTTAGTATTTGAGCACATGGAATGAGAAGTTTAAAGCTGAA  935

seq1  TAATTTGTTCACTGGAAGGAATTTTTCATGCCTTCTGTGTATGTGTAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTCACTGGAAGGAATTTTTCATGCCTTCTGTGTATGTGTAAAT  985

seq1  CTATAATTTTAAATGTATTTTATTGTATCATTTGAGAGTTTTATATGTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATTTTAAATGTATTTTATTGTATCATTTGAGAGTTTTATATGTAA  1035

seq1  ATTATGTACTTATATCATTTACATCATAATCTATGCCTTTTTCAACTCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTACTTATATCATTTACATCATAATCTATGCCTTTTTCAACTCAC  1085

seq1  CCGGTGCCTCCAACTCCTCAAATTTATGAATTC  1133
      |||||||||||||||||||||||||||||||||
seq2  CCGGTGCCTCCAACTCCTCAAATTTATGAATTC  1118