BAC Information

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BAC

Clone NameB6Ng01-148L12
Chromosome1 (Build37)
Map Location 159,734,081 - 159,916,977
singlet/doubletdoublet
Overlap genenone
Upstream geneRalgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream gene6430517E21Rik, Astn1, Pappa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L12.bB6Ng01-148L12.g
ACCDH945249DH945250
length1,1351,089
definitionDH945249|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L12, 5' end.DH945250|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,734,081 - 159,735,219)(159,915,887 - 159,916,977)
sequence
gaattctgttagctcagttgggtgttgagaactattgtacaacccttgtt
cctcgatgaataaagatagggaaacggaatattctacaataaagagtctc
aattagacaaaataatatccacaataagcaagctcccagagaaaagaata
aagggggtctctgatgacaaaaaggacagggaaccccccacgcaaagttg
tttttttccctcatcgcctggttatttgttggaaatgttagcaaaatacc
tttcaaagttcaatgatataatttatgtaaagtgttatgcaaatactagt
ttttgttattaatatcaacagtgatagttatggaaatgatcttgccagag
cctgtggtttcaagtaacaattttaacaagaacgttaactttgcatcttc
caccccctgcattatatttgtaaagtgttgtgaggtgctgtggactctta
agtgtctgtgcctgggcagtgctgtgctccaaggcctgcagtgggctgtg
tgcactcacctgtgtcaggtcatgttgctgcccctcccccacctctttgc
tttgcattgccgcacatcaccaaaagataaaacaaaaccaaacaaaacca
accaaacaaaatctcaggtcagaaaacctatttgaaagggtgatgaagca
tttgagtcgaggtgtggtttttactcccacgtttttttttttttcctgct
attaattaaataaaacttcattaccaaccaccctttccatggacgatgaa
agctctgtgaaaaacaagctgtgagactctgggtgccgttgtgttgggtc
tgtgcctacccacacaagacagttcgcacatcacggtgacattgcttggg
aagctgggcgttccagatggtgaggtccacatgtactttaatgtcaaaaa
gaatccaggttctcttcagccttccaatcccttttaagctagttgtttct
aaacacgttggagatgcctgaataactactactaattggaaaagatagca
attattcaaatcacatttgctttaaaaaatcagagcccttttattaaaat
gcatacagtgtaaatgaatctacagcattcatatctactctgctgtaaga
ataagaagccgaggagctcgccgtggtctaatctt
gaattctcatgatgattaactgtatcccgtaaaactgatgtaaaataaat
cactgttccactttttaaaaaaagacaattatatatatatacatatatgt
atatatatatgtttatgttaatatatgcaaatatgtatgctaagaaccat
ctagaagtaaatacaagagaatgtcacctcaaacttggagctgccaaaga
ttccttagagaatatgtaataaatcactagaacttattcagagttgtata
ttaagaaggttaaggaaatgaaaatgtgtcacaatctgatggaaaattta
tagtacatatatatatgagttagaatttgtctgcagaatatacgaataac
ttctataaactaacaatacaatgacaaatgacccaataacaatgtgaatg
atagacctgagcagtcatttcactgaaaatataagtacacagcataaaac
atatatattaaataagtaaatacaaatatgctttcaaaataattatttag
cagttaaaatatgtctagatataatcccctatttcaaaccaatagaaagt
gctaaaatttaaaagacacagactaccaaatattgctgagggcatgatac
aactcaattcatatgtatcaatgctgtagcagagtacaataattattaac
tttgagaaggtattatctgacagttccttacaaatgcacacctaccctca
tgtatagcctttccattgccacccatgtcagagcaacacatacacataca
cacacacacacacacacacacacacacacaaacacacacacactcacaca
cacacacacacacacacacacacacacacacaaacagtagcgcaagagtg
cttaaaacagctttcctcatcacaaaaaaattaggggaaaatttggctgt
ccagcacaaaccagaaaaaaatatagtgtgatgtgtccacttcattaatt
ctcttcatcatacagttaaaataattaatttataattaattaatccatta
ataattttattaacttgaaaaagtattaaacccattagcttaaggaaaaa
attggtgccttgttgtaactttcaattttttggtgatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159734081_159735219
seq2: B6Ng01-148L12.b_46_1180

seq1  GAATTCTGTTAGCTCAGTTGGGTGTTGAGAACTATTGTACAACCCTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTAGCTCAGTTGGGTGTTGAGAACTATTGTACAACCCTTGTT  50

seq1  CCTCGATGAATAAAGATAGGGAAACGGAATATTCTACAATAAAGAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGATGAATAAAGATAGGGAAACGGAATATTCTACAATAAAGAGTCTC  100

seq1  AATTAGACAAAATAATATCCACAATAAGCAAGCTCCCAGAGAAAAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACAAAATAATATCCACAATAAGCAAGCTCCCAGAGAAAAGAATA  150

seq1  AAGGGGGTCTCTGATGACAAAAAGGACAGGGAACCCCCCACGCAAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGTCTCTGATGACAAAAAGGACAGGGAACCCCCCACGCAAAGTTG  200

seq1  TTTTTTTCCCTCATCGCCTGGTTATTTGTTGGAAATGTTAGCAAAATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCCTCATCGCCTGGTTATTTGTTGGAAATGTTAGCAAAATACC  250

seq1  TTTCAAAGTTCAATGATATAATTTATGTAAAGTGTTATGCAAATACTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTTCAATGATATAATTTATGTAAAGTGTTATGCAAATACTAGT  300

seq1  TTTTGTTATTAATATCAACAGTGATAGTTATGGAAATGATCTTGCCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTATTAATATCAACAGTGATAGTTATGGAAATGATCTTGCCAGAG  350

seq1  CCTGTGGTTTCAAGTAACAATTTTAACAAGAACGTTAACTTTGCATCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTTTCAAGTAACAATTTTAACAAGAACGTTAACTTTGCATCTTC  400

seq1  CACCCCCTGCATTATATTTGTAAAGTGTTGTGAGGTGCTGTGGACTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTGCATTATATTTGTAAAGTGTTGTGAGGTGCTGTGGACTCTTA  450

seq1  AGTGTCTGTGCCTGGGCAGTGCTGTGCTCCAAGGCCTGCAGTGGGCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGTGCCTGGGCAGTGCTGTGCTCCAAGGCCTGCAGTGGGCTGTG  500

seq1  TGCACTCACCTGTGTCAGGTCATGTTGCTGCCCCTCCCCCACCTCTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCACCTGTGTCAGGTCATGTTGCTGCCCCTCCCCCACCTCTTTGC  550

seq1  TTTGCATTGCCGCACATCACCAAAAGATAAAACAAAACCAAACAAAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTGCCGCACATCACCAAAAGATAAAACAAAACCAAACAAAACCA  600

seq1  ACCAAACAAAATCTCAGGTCAGAAAACCTATTTGAAAGGGTGATGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAAAATCTCAGGTCAGAAAACCTATTTGAAAGGGTGATGAAGCA  650

seq1  TTTGAGTCGAGGTGTGGTTTTTACTCCCACGTTTTTTTTTTTTTCCTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCGAGGTGTGGTTTTTACTCCCACGTTTTTTTTTTTTTCCTGCT  700

seq1  ATTAATTAAAT-AAACTTCATTACCAACCACCCTTTCCATGGACGATGAA  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAAATAAAACTTCATTACCAACCACCCTTTCCATGGACGATGAA  750

seq1  GGCTCTGTGAAAAACAAGCTGTGAGACTCTGGGTGCCGTTGTGTTGGGTC  799
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGAAAAACAAGCTGTGAGACTCTGGGTGCCGTTGTGTTGGGTC  800

seq1  TGTGCCTACCCACACAAGACAGTTCGCACATCACGGTGACA-TGCTTGGG  848
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTGCCTACCCACACAAGACAGTTCGCACATCACGGTGACATTGCTTGGG  850

seq1  AAGCTGGGCGTTTCCAGAT-GTGA-GTCCACATGTACTTTAATGTCAAAA  896
      |||||||||| |||||||| |||| |||||||||||||||||||||||||
seq2  AAGCTGGGCG-TTCCAGATGGTGAGGTCCACATGTACTTTAATGTCAAAA  899

seq1  AGAATCCAGGTTCTC-TCAGCCTTCC-ATCCC-TTTAAGCTAGTTGTTTC  943
      ||||||||||||||| |||||||||| ||||| |||||||||||||||||
seq2  AGAATCCAGGTTCTCTTCAGCCTTCCAATCCCTTTTAAGCTAGTTGTTTC  949

seq1  TAAACACGTTGGAGAATGCCTGAATAAC-ACTACTAATTGGACACAGATT  992
      |||||||||||||| ||||||||||||| ||||||||||||| | ||| |
seq2  TAAACACGTTGGAG-ATGCCTGAATAACTACTACTAATTGGA-AAAGA-T  996

seq1  AGCATGTAATCAAATCACATCTGCTTTAAAAAAATCAGAGCCCCTTTTAT  1042
      ||||  || ||||||||||| |||||| |||||||||||| |||||||||
seq2  AGCAATTATTCAAATCACATTTGCTTT-AAAAAATCAGAG-CCCTTTTAT  1044

seq1  TAAAATAGCATACAGTGTAAATTGATCTACAGCAATC-TATCTACTTCTG  1091
      |||||| |||||||||||||||  |||||||||| || ||||||| ||||
seq2  TAAAAT-GCATACAGTGTAAATGAATCTACAGCATTCATATCTAC-TCTG  1092

seq1  GTGTAAAAGAATAAGAAGCCGAGTGAGCTCGGTCGTTGCTCTAATCTT  1139
       |||  ||||||||||||||||| |||||||  |  || |||||||||
seq2  CTGT--AAGAATAAGAAGCCGAG-GAGCTCG--CCGTGGTCTAATCTT  1135

seq1: chr1_159915887_159916977
seq2: B6Ng01-148L12.g_67_1155 (reverse)

seq1  AGATCA-CAAAAAATGGAAGTTTACAAC-AGGCACTAATTTTTTCCTTAA  48
      |||||| |||||||| |||  ||||||| |||||| ||||||||||||||
seq2  AGATCACCAAAAAATTGAAAGTTACAACAAGGCACCAATTTTTTCCTTAA  50

seq1  GCTAAT-GGTTTAATACTTTTTTCAAGTTAATTAAATTAATTAATTGATT  97
      |||||| |||||||||| |||||||||||||| ||||| |||||| ||||
seq2  GCTAATGGGTTTAATAC-TTTTTCAAGTTAATAAAATT-ATTAATGGATT  98

seq1  AATTAATTATTAATTAATTATTTTAACTGTATTGATGAAGAGAATTTAAT  147
      |||||||||| |||||||||||||||||||| |||||||||||| |||||
seq2  AATTAATTATAAATTAATTATTTTAACTGTA-TGATGAAGAGAA-TTAAT  146

seq1  GAAGTGGACACATCACACTATATTTTTTTCTTGTTTTGCTGCTGGACAGC  197
      ||||||||||||||||||||||||||||||| ||||   |||||||||||
seq2  GAAGTGGACACATCACACTATATTTTTTTCTGGTTT--GTGCTGGACAGC  194

seq1  CAAATTTTCCCCTAATTTTTTTGTGATGAGGAAAGCTGTTCTAAGCACTC  247
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAATTTTCCCCTAATTTTTTTGTGATGAGGAAAGCTGTTTTAAGCACTC  244

seq1  TTGCGCTACTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCTACTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  294

seq1  GTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  347
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  344

seq1  GTGTATGTGTTGCTCTGACATGGGTGGCAATGGAAAGGCTATACATGA-G  396
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGTATGTGTTGCTCTGACATGGGTGGCAATGGAAAGGCTATACATGAGG  394

seq1  GTAGGTGTGCATTTGTAAGGAACTGTCAGATAATACCTTCTCAAAGTTAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGTGCATTTGTAAGGAACTGTCAGATAATACCTTCTCAAAGTTAA  444

seq1  TAATTATTGTACTCTGCTACAGCATTGATACATATGAATTGAGTTGTATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTGTACTCTGCTACAGCATTGATACATATGAATTGAGTTGTATC  494

seq1  ATGCCCTCAGCAATATTTGGTAGTCTGTGTCTTTTAAATTTTAGCACTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTCAGCAATATTTGGTAGTCTGTGTCTTTTAAATTTTAGCACTTT  544

seq1  CTATTGGTTTGAAATAGGGGATTATATCTAGACATATTTTAACTGCTAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTTTGAAATAGGGGATTATATCTAGACATATTTTAACTGCTAAA  594

seq1  TAATTATTTTGAAAGCATATTTGTATTTACTTATTTAATATATATGTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTTGAAAGCATATTTGTATTTACTTATTTAATATATATGTTTT  644

seq1  ATGCTGTGTACTTATATTTTCAGTGAAATGACTGCTCAGGTCTATCATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTGTACTTATATTTTCAGTGAAATGACTGCTCAGGTCTATCATTC  694

seq1  ACATTGTTATTGGGTCATTTGTCATTGTATTGTTAGTTTATAGAAGTTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTATTGGGTCATTTGTCATTGTATTGTTAGTTTATAGAAGTTAT  744

seq1  TCGTATATTCTGCAGACAAATTCTAACTCATATATATATGTACTATAAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTATATTCTGCAGACAAATTCTAACTCATATATATATGTACTATAAAT  794

seq1  TTTCCATCAGATTGTGACACATTTTCATTTCCTTAACCTTCTTAATATAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCAGATTGTGACACATTTTCATTTCCTTAACCTTCTTAATATAC  844

seq1  AACTCTGAATAAGTTCTAGTGATTTATTACATATTCTCTAAGGAATCTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAATAAGTTCTAGTGATTTATTACATATTCTCTAAGGAATCTTT  894

seq1  GGCAGCTCCAAGTTTGAGGTGACATTCTCTTGTATTTACTTCTAGATGGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCCAAGTTTGAGGTGACATTCTCTTGTATTTACTTCTAGATGGT  944

seq1  TCTTAGCATACATATTTGCATATATTAACATAAACATATATATATACATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCATACATATTTGCATATATTAACATAAACATATATATATACATA  994

seq1  TATGTATATATATATAATTGTCTTTTTTTAAAAAGTGGAACAGTGATTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATATATATAATTGTCTTTTTTTAAAAAGTGGAACAGTGATTTA  1044

seq1  TTTTACATCAGTTTTACGGGATACAGTTAATCATCATGAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATCAGTTTTACGGGATACAGTTAATCATCATGAGAATTC  1089