BAC Information

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BAC

Clone NameB6Ng01-150F24
Chromosome1 (Build37)
Map Location 97,161,531 - 97,162,693
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666025, LOC100040685, LOC383603
Downstream geneTmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150F24.bB6Ng01-150F24.g
ACCDH946469DH946470
length3481,147
definitionDH946469|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F24, 5' end.DH946470|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgcaaggtaatgactggaactagaatatatcatcctgagtgaggtaatcc
agacacaaaagggaatggatggtatgtactcacttataagtggatattag
ccataaagtacaactatggtacactccataaacccaaagaagctaaacaa
gaaggaaggcacatgtgtagatgcttgaatctcaattagaaggggaaaca
aaatagtcataggaggcagagggaggaagggaactgggtagatgaaggga
tagggaggggaatcagggtaggatcacgtatggggagagacaggagatat
ggccatgagaatgactgaaactctgtatccactggggatttaggtggt

gaattcattctggtagagcatagaaaagcatttaattaaaaaaaccttat
atatcaagtttactgtaagggaacacttgctgatcagattataaaaatgt
actgactataaggacctaggtgcactagatggaatcaatcacaccattat
tctaaaaatagtttttaatatcttttattaattttttgaatattaaatat
ctgttttaaaagatttatttacttattatatgtaagtacactgtagctgt
cttcagacaccccagaagagggcatcagatctcattagggatggttgtga
gccaccatgtggttactgggaattgaactcaggacctttagaagagcaga
cagtgctcttaatcactgaaccatctctctagcccatcttttattaatat
ttatcttccaaaaatgtgttcattttaatcctgtaaaatatgacataacc
aggtgaaggataatttcaatgtgaattgtttcgtaaaagtattctgcgct
ccccaaataatggcatgttaatgaatcagaaagctaagggaattgctatg
aaaataattggaagataaaagcaacagaatgttagtgttaatgcttaagt
gtctgccagttatttaaccttttaaacttttaaactttttttttaaattt
aatatgagtaatcaaaattccaaagtcaagtcttataaggatgcatagaa
ggactgtgctgctaaacaagctctgacccagaattgttcctctctgaaag
aactgctgggacaaaaatggagaagagcctgaaggaaagaaggtcagtaa
caggcccaaattggaagccagcccatgggaggtcccaaagcctgacacta
ttactgacgctatagtgtgctcacaaaaaggagcctatcatgatggccct
ccaaaaggccaacaccagctgaaagagttagatgcagatatttacaccta
accatggatagaagctggtgacccctgtggttgattgggaaaagctgaca
agctgagaggcaaccctatagagacagaggccacttaggtagacccttga
gatgcttcagaacctgagctacaaccagcagcatacccaggttaatatga
ggttccaaccacattcacgcgaaagaactgtctggcttggactcggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97161531_97162693
seq2: B6Ng01-150F24.g_65_1211 (reverse)

seq1  ACCGAGTCCAGACCCAG-CAGTCCTCT-GC-TGTATGTGTGTTGGGGACC  47
      |||||||||| | |||| |||| || | || || ||||| ||| || |||
seq2  ACCGAGTCCA-AGCCAGACAGTTCTTTCGCGTGAATGTG-GTT-GGAACC  47

seq1  TCATATTAACTGGTGTATGCTGCCTGGTTGGTAGCTCAGTGTCTGAGCAA  97
      ||||||||||  | |||||||| |||||| |||||||||  |||||   |
seq2  TCATATTAACCTGGGTATGCTG-CTGGTT-GTAGCTCAGGTTCTGAAGCA  95

seq1  TCTCAGGGGTCTACCTTAGTTGGCTTCTTGTCTTCCTATAGGGTTGCCCT  147
      ||||| |||||||||| || |||| || |||||  |||||||||||||  
seq2  TCTCAAGGGTCTACCTAAG-TGGCCTC-TGTCT--CTATAGGGTTGCC--  139

seq1  CCTCAGCTTTGTCCAGCTTTTCCCCAATTCAACCACAGGGGTCACCAGCT  197
       |||||| |||| |||||||||||  | ||||||||||||||||||||||
seq2  TCTCAGC-TTGT-CAGCTTTTCCC--AATCAACCACAGGGGTCACCAGCT  185

seq1  TCTATCCATTGGTTAGGTGTAAATATCTGCATCTAACTCTTTCAGCTGGT  247
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  TCTATCCA-TGGTTAGGTGTAAATATCTGCATCTAACTCTTTCAGCTGG-  233

seq1  TGTTGGGCCTTTTGGAGGGCCATCATGATAGGCTCCTTTTTGTGAGCACA  297
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTT-GGCCTTTTGGAGGGCCATCATGATAGGCTCCTTTTTGTGAGCACA  282

seq1  CTATAGCGTCAGTAATAGTGTCAGGCTTTGGGACCTCCCATGGGCTGGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCGTCAGTAATAGTGTCAGGCTTTGGGACCTCCCATGGGCTGGCT  332

seq1  TCCAATTTGGGCCTGTTACCTGACCTTCTTTCCTTCAGGCTCTTCTCCAT  397
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCAATTTGGGCCTGTTA-CTGACCTTCTTTCCTTCAGGCTCTTCTCCAT  381

seq1  TTTTGTCCCAGCAGTTCTTTCAGAGAGGAACAATTCTGGGTCAGAGCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCCAGCAGTTCTTTCAGAGAGGAACAATTCTGGGTCAGAGCTTG  431

seq1  TTTAGCAGCACAGTCCTTCTATGCATCCTTATAAGACTTGACTTTGGAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGCACAGTCCTTCTATGCATCCTTATAAGACTTGACTTTGGAAT  481

seq1  TTTGATTACTCATATTAAATTTAAAAAAAAAGTTTAAAAGTTTAAAAGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTACTCATATTAAATTTAAAAAAAAAGTTTAAAAGTTTAAAAGGT  531

seq1  TAAATAACTGGCAGACACTTAAGCATTAACACTAACATTCTGTTGCTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTGGCAGACACTTAAGCATTAACACTAACATTCTGTTGCTTTT  581

seq1  ATCTTCCAATTATTTTCATAGCAATTCCCTTAGCTTTCTGATTCATTAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCAATTATTTTCATAGCAATTCCCTTAGCTTTCTGATTCATTAAC  631

seq1  ATGCCATTATTTGGGGAGCGCAGAATACTTTTACGAAACAATTCACATTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATTATTTGGGGAGCGCAGAATACTTTTACGAAACAATTCACATTG  681

seq1  AAATTATCCTTCACCTGGTTATGTCATATTTTACAGGATTAAAATGAACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCTTCACCTGGTTATGTCATATTTTACAGGATTAAAATGAACA  731

seq1  CATTTTTGGAAGATAAATATTAATAAAAGATGGGCTAGAGAGATGGTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGGAAGATAAATATTAATAAAAGATGGGCTAGAGAGATGGTTCA  781

seq1  GTGATTAAGAGCACTGTCTGCTCTTCTAAAGGTCCTGAGTTCAATTCCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAAGAGCACTGTCTGCTCTTCTAAAGGTCCTGAGTTCAATTCCCA  831

seq1  GTAACCACATGGTGGCTCACAACCATCCCTAATGAGATCTGATGCCCTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCACATGGTGGCTCACAACCATCCCTAATGAGATCTGATGCCCTCT  881

seq1  TCTGGGGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAGTAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAGTAAAT  931

seq1  AAATCTTTTAAAACAGATATTTAATATTCAAAAAATTAATAAAAGATATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTAAAACAGATATTTAATATTCAAAAAATTAATAAAAGATATT  981

seq1  AAAAACTATTTTTAGAATAATGGTGTGATTGATTCCATCTAGTGCACCTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATTTTTAGAATAATGGTGTGATTGATTCCATCTAGTGCACCTA  1031

seq1  GGTCCTTATAGTCAGTACATTTTTATAATCTGATCAGCAAGTGTTCCCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTATAGTCAGTACATTTTTATAATCTGATCAGCAAGTGTTCCCTT  1081

seq1  ACAGTAAACTTGATATATAAGGTTTTTTTAATTAAATGCTTTTCTATGCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAACTTGATATATAAGGTTTTTTTAATTAAATGCTTTTCTATGCT  1131

seq1  CTACCAGAATGAATTC  1163
      ||||||||||||||||
seq2  CTACCAGAATGAATTC  1147


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