BAC Information

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BAC

Clone NameB6Ng01-151A05
Chromosome1 (Build37)
Map Location 72,170,628 - 72,334,422
singlet/doubletdoublet
Overlap geneMreg, Pecr, Tmem169
Upstream geneLOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255
Downstream geneXrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A05.bB6Ng01-151A05.g
ACCDH946944DH946945
length7611,161
definitionDH946944|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A05, 5' end.DH946945|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,333,662 - 72,334,422)(72,170,628 - 72,171,800)
sequence
gaattcagtagtcctggctggtggtatggacccgtgccctcagtgctact
cagctactctggaggcaggagaattgcgagttcaatgcttgactacagag
tgtggtcaggggcaccctgggcaactaaggagagcccttgcttgaggtaa
gaaattaagagggctggaaatacaactctgtgggagagtccatacttctt
atacataggcccttttgcctcatacacatactaaggccattggttcaatc
cctagtaaagaggaaacaaataaacaacactgaggctgattctgcaccat
ctgtctgcaaagaaaacagttcatggaagcaggggtggttgcttgtttat
aaagaccttgtacgctgctccttaccgtaagagctgaagattggatcctt
tatttggtttctgccctacctaatgtgataagttcttctcccaccgtcca
ccccctcctctcctatgctacaatggaagactgaacaaagacagggaaac
ccaagcacccccttgcctgagctgtcttccccatgtctggtacacaagaa
ctcagggagtgccatactgactgaacactcataagtgagctgcctcataa
gtgagggctcttgcttggaggcacgagcagagttagatgccttactggta
ttcctgctacacagattctgtgagtctgtgtgttgactgtcaatcggagc
cagcagctgttttgcaagggggttgggggggagctaacgaggaaaatggg
gagggggaggg
gaattcatcactgaagcctgtgagcaggcagcgcggactgagctctgcgg
gggggaacaacagtgcagggctgtgggaaaggggaaaaaaaggtctgggg
ctgaggggacgtcaacaggctccgatcctaacgggtctttagaggtgact
atctactcctgcaaaggaacgaaaacaaaactaaaattttgagcctgctt
ttccagataaaataaaaatatgatcgctatccgttcttaaacaatacctc
attgctttcttcaaaaataacacaaattaggtctggagagatggctcaga
cattaagggctaggctcacaaccaaaataattcaaattagattaacaata
atgacggtagtaatgatatagattccgtaagaccagagactgttttattt
tcacgactagtacagccacacacagtaggtactccaagagataagtgcct
agtcagatgtgacagtggacactggaagtcccagctgcttggaggctgag
aggtgagaggaccacttgagctcacaagttcaagaccagtctaggcagaa
tacttggtctcaaacacaaaataaaatgagatacatgcttagcaaaggaa
gctgctagcccctgataatggtcctactgttgagttctttagattcattt
cacttttataacctgaaggtacaatgttattattcatgtgcttttaaagg
agatatacccagcaaacagacacgggtgcttattagcatggattaaacat
tcataataaaaaagaaacataagaataagaggcagaaagatcttcacatt
tgaggccaacctgggctaactggccaatctaaattacctaccaagatctt
gtctcaaaaatttaaaaaaaaaaaatcagtggctggagaaacggcccggc
aggtaagagatttgctgctcttgcaaagaactctgcatgatggcagcatc
acatgatggcttacactgtcagtaattccagttccaggtctctcttcagg
taccatacattacactaacatacgtacagggtaaagatcataatatagaa
tgaaatcgttttgaattatttttgcgcatggggttttgcctgccatgtct
ggtggcatgtgcttgcctagtgccagatgtcgaagaacctgtgggaatcc
ctagggctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72333662_72334422
seq2: B6Ng01-151A05.b_47_807 (reverse)

seq1  CCCTCCCCCTCCCCATTTTCCTCGTTAGCTCCCCCCCAACCCCCTTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCTCCCCATTTTCCTCGTTAGCTCCCCCCCAACCCCCTTGCAA  50

seq1  AACAGCTGCTGGCTCCGATTGACAGTCAACACACAGACTCACAGAATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGCTGGCTCCGATTGACAGTCAACACACAGACTCACAGAATCTG  100

seq1  TGTAGCAGGAATACCAGTAAGGCATCTAACTCTGCTCGTGCCTCCAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGGAATACCAGTAAGGCATCTAACTCTGCTCGTGCCTCCAAGCA  150

seq1  AGAGCCCTCACTTATGAGGCAGCTCACTTATGAGTGTTCAGTCAGTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCTCACTTATGAGGCAGCTCACTTATGAGTGTTCAGTCAGTATGG  200

seq1  CACTCCCTGAGTTCTTGTGTACCAGACATGGGGAAGACAGCTCAGGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTGAGTTCTTGTGTACCAGACATGGGGAAGACAGCTCAGGCAAG  250

seq1  GGGGTGCTTGGGTTTCCCTGTCTTTGTTCAGTCTTCCATTGTAGCATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGCTTGGGTTTCCCTGTCTTTGTTCAGTCTTCCATTGTAGCATAGG  300

seq1  AGAGGAGGGGGTGGACGGTGGGAGAAGAACTTATCACATTAGGTAGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGGGGTGGACGGTGGGAGAAGAACTTATCACATTAGGTAGGGCA  350

seq1  GAAACCAAATAAAGGATCCAATCTTCAGCTCTTACGGTAAGGAGCAGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAAATAAAGGATCCAATCTTCAGCTCTTACGGTAAGGAGCAGCGT  400

seq1  ACAAGGTCTTTATAAACAAGCAACCACCCCTGCTTCCATGAACTGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCTTTATAAACAAGCAACCACCCCTGCTTCCATGAACTGTTTTC  450

seq1  TTTGCAGACAGATGGTGCAGAATCAGCCTCAGTGTTGTTTATTTGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGACAGATGGTGCAGAATCAGCCTCAGTGTTGTTTATTTGTTTCC  500

seq1  TCTTTACTAGGGATTGAACCAATGGCCTTAGTATGTGTATGAGGCAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTAGGGATTGAACCAATGGCCTTAGTATGTGTATGAGGCAAAAG  550

seq1  GGCCTATGTATAAGAAGTATGGACTCTCCCACAGAGTTGTATTTCCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATGTATAAGAAGTATGGACTCTCCCACAGAGTTGTATTTCCAGCC  600

seq1  CTCTTAATTTCTTACCTCAAGCAAGGGCTCTCCTTAGTTGCCCAGGGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATTTCTTACCTCAAGCAAGGGCTCTCCTTAGTTGCCCAGGGTGC  650

seq1  CCCTGACCACACTCTGTAGTCAAGCATTGAACTCGCAATTCTCCTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACCACACTCTGTAGTCAAGCATTGAACTCGCAATTCTCCTGCCTC  700

seq1  CAGAGTAGCTGAGTAGCACTGAGGGCACGGGTCCATACCACCAGCCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAGCTGAGTAGCACTGAGGGCACGGGTCCATACCACCAGCCAGGA  750

seq1  CTACTGAATTC  761
      |||||||||||
seq2  CTACTGAATTC  761

seq1: chr1_72170628_72171800
seq2: B6Ng01-151A05.g_68_1228

seq1  GAATTCATCACTGAAGCCTGTGAGCAGGCAGCGCGGACTGAGCTCTGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACTGAAGCCTGTGAGCAGGCAGCGCGGACTGAGCTCTGCGG  50

seq1  GGGGGAACAACAGTGCAGGGCTGTGGGAAAGGGGAAAAAAAGGTCTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAACAACAGTGCAGGGCTGTGGGAAAGGGGAAAAAAAGGTCTGGGG  100

seq1  CTGAGGGGACGTCAACAGGCTCCGATCCTAACGGGTCTTTAGAGGTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGGACGTCAACAGGCTCCGATCCTAACGGGTCTTTAGAGGTGACT  150

seq1  ATCTACTCCTGCAAAGGAACGAAAACAAAACTAAAATTTTGAGCCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCCTGCAAAGGAACGAAAACAAAACTAAAATTTTGAGCCTGCTT  200

seq1  TTCCAGATAAAATAAAAATATGATCGCTATCCGTTCTTAAACAATACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATAAAATAAAAATATGATCGCTATCCGTTCTTAAACAATACCTC  250

seq1  ATTGCTTTCTTCAAAAATAACACAAATTAGGTCTGGAGAGATGGCTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCTTCAAAAATAACACAAATTAGGTCTGGAGAGATGGCTCAGA  300

seq1  CATTAAGGGCTAGGCTCACAACCAAAATAATTCAAATTAGATTAACAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGGGCTAGGCTCACAACCAAAATAATTCAAATTAGATTAACAATA  350

seq1  ATGACGGTAGTAATGATATAGATTCCGTAAGACCAGAGACTGTTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACGGTAGTAATGATATAGATTCCGTAAGACCAGAGACTGTTTTATTT  400

seq1  TCACGACTAGTACAGCCACACACAGTAGGTACTCCAAGAGATAAGTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGACTAGTACAGCCACACACAGTAGGTACTCCAAGAGATAAGTGCCT  450

seq1  AGTCAGATGTGACAGTGGACACTGGAAGTCCCAGCTGCTTGGAGGCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATGTGACAGTGGACACTGGAAGTCCCAGCTGCTTGGAGGCTGAG  500

seq1  AGGTGAGAGGACCACTTGAGCTCACAAGTTCAAGACCAGTCTAGGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGAGGACCACTTGAGCTCACAAGTTCAAGACCAGTCTAGGCAGAA  550

seq1  TACTTGGTCTCAAACACAAAATAAAATGAGATACATGCTTAGCAAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTCTCAAACACAAAATAAAATGAGATACATGCTTAGCAAAGGAA  600

seq1  GCTGCTAGCCCCTGATAATGGTCCTACTGTTGAGTTCTTTAGATTCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGCCCCTGATAATGGTCCTACTGTTGAGTTCTTTAGATTCATTT  650

seq1  CACTTTTATAACCTGAAGGTACAATGTTATTATTCATGTGCTTTTAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTATAACCTGAAGGTACAATGTTATTATTCATGTGCTTTTAAAGG  700

seq1  AGATATACCCAGCAAACAGACACGGGTGCTTATTAGCATGGATTAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATACCCAGCAAACAGACACGGGTGCTTATTAGCATGGATTAAACAT  750

seq1  TCATAATAAAAAAGAAACATAAGAATAAGAGGCAGAAAGATCTTCACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATAAAAAAGAAACATAAGAATAAGAGGCAGAAAGATCTTCACATT  800

seq1  TGAGGCCAACCTGGGCTAACTGGCCAATCTAAATTACCTACCAAGATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAACCTGGGCTAACTGGCCAATCTAAATTACCTACCAAGATCTT  850

seq1  GTCTCAAAAATTT-AAAAAAAAAAATCAGTGGCTGGAGAAACGGCCCGGC  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAAATTTAAAAAAAAAAAATCAGTGGCTGGAGAAACGGCCCGGC  900

seq1  AGGTAAGAGATTTGCTGCTCTTGCAAAGAACTCTGCATGATGGCAGCATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGTAAGAGATTTGCTGCTCTTGCAAAGAACTCTGCATGATGGCAGCAT-  949

seq1  CACATGATGGCTTACAACTGTCAGTAATTCCAGTTCCAGGGTCTCTCTTC  999
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  CACATGATGGCTTAC-ACTGTCAGTAATTCCAGTTCCA-GGTCTCTCTTC  997

seq1  AGGTACCATACATTACACTAACATACGTACAGGGAAAAGATTCATACATA  1049
      |||||||||||||||||||||||||||||||||| ||||| ||||| |||
seq2  AGGTACCATACATTACACTAACATACGTACAGGGTAAAGA-TCATA-ATA  1045

seq1  TAGAATGAAAATACGTTTTAAATTTATTTTATGCGCATGGTGTTTTGCCT  1099
      ||||||||||   |||||| || ||||||| ||||||||| |||||||||
seq2  TAGAATGAAA--TCGTTTTGAA-TTATTTT-TGCGCATGGGGTTTTGCCT  1091

seq1  G-CATGTCTGTGTGCCATGTGCTTGCCTAGTGCCCAAAGATGTCAGAAGA  1148
      | |||||||| ||| |||||||||||||||||||   ||||||| |||||
seq2  GCCATGTCTG-GTGGCATGTGCTTGCCTAGTGCC---AGATGTC-GAAGA  1136

seq1  CACTGTGGGATCCTCTAGGGCTGGA  1173
        ||||||||  | |||||||||||
seq2  ACCTGTGGGAATCCCTAGGGCTGGA  1161