BAC Information

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BAC

Clone NameB6Ng01-151B04
Chromosome1 (Build37)
Map Location 94,456,351 - 94,576,971
singlet/doubletdoublet
Overlap geneOlfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos
Upstream geneTwist2, Hdac4, LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414
Downstream geneGpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B04.bB6Ng01-151B04.g
ACCDH946988DH946989
length9871,105
definitionDH946988|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B04, 5' end.DH946989|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,456,351 - 94,457,011)(94,575,862 - 94,576,971)
sequence
gaattcacaggctagcagatgggtcctatgtccattccctttttgcactg
taaagaatccttgagagtcctcataacattaccatgtgcatttgtggatc
tccacactgctcgatgccatcatttctgagatgtttatgtacctaacatg
tcatggaggatcatttcatgtgttaccatgactagaacattgggtatctg
gataattggccaaatattattctgggtgtttctttgaagatgctgtggat
acatttgcagttcatggactaggtaaagtaaatttcccctttaatgtggg
tggtgcttgtttaatcagttgccagctcgaatagcaccaaaggcctggcc
attcactgaatacaaaggaacgtctgctgcctgcctgagctgagacaatt
ttgctccttcttgtgattctgaactgaaaacttcagctggcccatatctc
tagcttgtcttctgcagatcgttgctacacccactccagtagtaactcag
gtgacaggcctagaaacctggatgcagtcccaaggcaaaaagtttacaga
aatgtagtctcctggaaccgtggcatcctggataatgaatgctccaaatt
tgtccttgtgaatggatgctttctttcggtattgttttattataggtgcc
tccaagcaatgacttgccaaatacctaaacaaaattgaactttgcttcct
ggccttcaccaatgccctaggtagtccttgagccaaccctgggcttggaa
tccagtaagaatgttacctatttagtaacattcagaattgcctctagtat
tgtgagagagatagtgaaaaaacatcagcattactatctactacatagtg
ttagaaacctcaggcaagtttagcaaagtaagtttagaattcttattata
gttatgtatggcagactacattacttattagtagaaagtcctccacacaa
tcacttagaataaaagccgagtcacttccatatacag
gaattctctgatgtagaagctgcacagtaacatctgtcccctacctattc
cccaggcaagcccctgactcccagctggtaatatacgggactactcaggt
ctgcaggcagaggaacaggagccgcctcgttaggcagggtggatggctat
gtactgtggcatatgtttagaggacagaagggaaagtctttgaagaagga
cacggggcctttctgctctatgtggccaagctctgtgccatcagctatgt
ggggtccagtgtaggcaggaccagaaaggcaagggcatcttcgctcatat
ggtaccagacccacaatgtccatctgagtgtcacagtgactgggggatca
cagatcaaccccttcttcttctgggcttagaaggggtaggatccctaagt
ttgaagcctagcaggcctccagtggctttagggatgtgtaggtatcagct
gcctgtccaggtaaagtggtaaaaggaaattggatgcactggcatccaat
gggtactctttggcaatgatgcctttgaagatggcacagagaccaatgga
ctgacttcagaatgagaggagagaacctccctatcccctcacgtgatgcc
ctcaatggcagtgactccggagagtgtaacccacagcactctgaggtagt
ctaggaactctcaaaaaggaaggcatgggggctgggatggaatacaactg
gtacatcctcatgtgcagcttcctttgaatgcccagactgttgaagcctg
aaatacacaagggacaaacacacatgcttatgtataaattatagatgtaa
attacatcttgtgttatgtatcaattgtttgtgaattatacatacataat
ttatacataaattatgcaccatatttatataaatacataaaatactttat
tcatatttatgtctcatgtatttagatataatatactcctgccttcagct
ttctatttcatttaataattgatgctgaaattcttcccatgtaggacata
ggatctatcttaattctcttcgatgctgcttctcagggcggttccgagga
acgtctatcataattcatccacttcaatccacttttgtgtggggttggtt
acaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94456351_94457011
seq2: B6Ng01-151B04.b_45_705

seq1  GAATTCACAGGCTAGCAGATGGGTCCTATGTCCATTCCCTTTTTGCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGCTAGCAGATGGGTCCTATGTCCATTCCCTTTTTGCACTG  50

seq1  TAAAGAATCCTTGAGAGTCCTCATAACATTACCATGTGCATTTGTGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATCCTTGAGAGTCCTCATAACATTACCATGTGCATTTGTGGATC  100

seq1  TCCACACTGCTCGATGCCATCATTTCTGAGATGTTTATGTACCTAACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTGCTCGATGCCATCATTTCTGAGATGTTTATGTACCTAACATG  150

seq1  TCATGGAGGATCATTTCATGTGTTACCATGACTAGAACATTGGGTATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAGGATCATTTCATGTGTTACCATGACTAGAACATTGGGTATCTG  200

seq1  GATAATTGGCCAAATATTATTCTGGGTGTTTCTTTGAAGATGCTGTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGGCCAAATATTATTCTGGGTGTTTCTTTGAAGATGCTGTGGAT  250

seq1  ACATTTGCAGTTCATGGACTAGGTAAAGTAAATTTCCCCTTTAATGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGCAGTTCATGGACTAGGTAAAGTAAATTTCCCCTTTAATGTGGG  300

seq1  TGGTGCTTGTTTAATCAGTTGCCAGCTCGAATAGCACCAAAGGCCTGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTTGTTTAATCAGTTGCCAGCTCGAATAGCACCAAAGGCCTGGCC  350

seq1  ATTCACTGAATACAAAGGAACGTCTGCTGCCTGCCTGAGCTGAGACAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGAATACAAAGGAACGTCTGCTGCCTGCCTGAGCTGAGACAATT  400

seq1  TTGCTCCTTCTTGTGATTCTGAACTGAAAACTTCAGCTGGCCCATATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCTTCTTGTGATTCTGAACTGAAAACTTCAGCTGGCCCATATCTC  450

seq1  TAGCTTGTCTTCTGCAGATCGTTGCTACACCCACTCCAGTAGTAACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTCTTCTGCAGATCGTTGCTACACCCACTCCAGTAGTAACTCAG  500

seq1  GTGACAGGCCTAGAAACCTGGATGCAGTCCCAAGGCAAAAAGTTTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGGCCTAGAAACCTGGATGCAGTCCCAAGGCAAAAAGTTTACAGA  550

seq1  AATGTAGTCTCCTGGAACCGTGGCATCCTGGATAATGAATGCTCCAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTCTCCTGGAACCGTGGCATCCTGGATAATGAATGCTCCAAATT  600

seq1  TGTCCTTGTGAATGGATGCTTTCTTTCGGTATTGTTTTATTATAGGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTGAATGGATGCTTTCTTTCGGTATTGTTTTATTATAGGTGCC  650

seq1  TCCAAGCAATG  661
      |||||||||||
seq2  TCCAAGCAATG  661

seq1: chr1_94575862_94576971
seq2: B6Ng01-151B04.g_67_1171 (reverse)

seq1  TCTGTGAACCAAACCCACATCAAAAGTGGA-TGGAGTGGATGAATTAGTG  49
      ||||| |||||| |||||| |||||||||| || ||||||||||||| ||
seq2  TCTGT-AACCAACCCCACA-CAAAAGTGGATTGAAGTGGATGAATTA-TG  47

seq1  ATAGACGTTCCTCGGAA-CGGCCTGGGAAGCAGCCATCGGAGAGAATT-A  97
      ||||||||||||||||| || |||| ||||||| ||||| |||||||| |
seq2  ATAGACGTTCCTCGGAACCGCCCTGAGAAGCAG-CATCGAAGAGAATTAA  96

seq1  GATAGATCCCTATGTCCTACATGGGAAGAATTTCAGCATCAATTATTAAA  147
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAT-CCTATGTCCTACATGGGAAGAATTTCAGCATCAATTATTAAA  145

seq1  TGAAAATAGAAAGCTGAAAGGCAGGAGTATATTAATATCTAAATACATGA  197
      || ||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TG-AAATAGAAAGCTG-AAGGCAGGAGTATATT-ATATCTAAATACATGA  192

seq1  GACATAAATATGAATAAAGTATTTTATGTATTTATATAAATATGGTGCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAATATGAATAAAGTATTTTATGTATTTATATAAATATGGTGCAT  242

seq1  AATTTATGTATAAATTATGTATGTATAATTCACAAACAATTGATACATAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGTATAAATTATGTATGTATAATTCACAAACAATTGATACATAA  292

seq1  CACAAGATGTAATTTACATCTATAATTTATACATAAGCATGTGTGTTTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGATGTAATTTACATCTATAATTTATACATAAGCATGTGTGTTTGT  342

seq1  CCCTTGTGTATTTCAGGCTTCAACAGTCTGGGCATTCAAAGGAAGCTGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTGTATTTCAGGCTTCAACAGTCTGGGCATTCAAAGGAAGCTGCA  392

seq1  CATGAGGATGTACCAGTTGTATTCCATCCCAGCCCCCATGCCTTCCTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGATGTACCAGTTGTATTCCATCCCAGCCCCCATGCCTTCCTTTT  442

seq1  TGAGAGTTCCTAGACTACCTCAGAGTGCTGTGGGTTACACTCTCCGGAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTCCTAGACTACCTCAGAGTGCTGTGGGTTACACTCTCCGGAGT  492

seq1  CACTGCCATTGAGGGCATCACGTGAGGGGATAGGGAGGTTCTCTCCTCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCATTGAGGGCATCACGTGAGGGGATAGGGAGGTTCTCTCCTCTC  542

seq1  ATTCTGAAGTCAGTCCATTGGTCTCTGTGCCATCTTCAAAGGCATCATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAGTCAGTCCATTGGTCTCTGTGCCATCTTCAAAGGCATCATTG  592

seq1  CCAAAGAGTACCCATTGGATGCCAGTGCATCCAATTTCCTTTTACCACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGTACCCATTGGATGCCAGTGCATCCAATTTCCTTTTACCACTT  642

seq1  TACCTGGACAGGCAGCTGATACCTACACATCCCTAAAGCCACTGGAGGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGACAGGCAGCTGATACCTACACATCCCTAAAGCCACTGGAGGCC  692

seq1  TGCTAGGCTTCAAACTTAGGGATCCTACCCCTTCTAAGCCCAGAAGAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCTTCAAACTTAGGGATCCTACCCCTTCTAAGCCCAGAAGAAGA  742

seq1  AGGGGTTGATCTGTGATCCCCCAGTCACTGTGACACTCAGATGGACATTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTGATCTGTGATCCCCCAGTCACTGTGACACTCAGATGGACATTG  792

seq1  TGGGTCTGGTACCATATGAGCGAAGATGCCCTTGCCTTTCTGGTCCTGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGGTACCATATGAGCGAAGATGCCCTTGCCTTTCTGGTCCTGCC  842

seq1  TACACTGGACCCCACATAGCTGATGGCACAGAGCTTGGCCACATAGAGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGACCCCACATAGCTGATGGCACAGAGCTTGGCCACATAGAGCA  892

seq1  GAAAGGCCCCGTGTCCTTCTTCAAAGACTTTCCCTTCTGTCCTCTAAACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCCCGTGTCCTTCTTCAAAGACTTTCCCTTCTGTCCTCTAAACA  942

seq1  TATGCCACAGTACATAGCCATCCACCCTGCCTAACGAGGCGGCTCCTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCACAGTACATAGCCATCCACCCTGCCTAACGAGGCGGCTCCTGTT  992

seq1  CCTCTGCCTGCAGACCTGAGTAGTCCCGTATATTACCAGCTGGGAGTCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTGCAGACCTGAGTAGTCCCGTATATTACCAGCTGGGAGTCAG  1042

seq1  GGGCTTGCCTGGGGAATAGGTAGGGGACAGATGTTACTGTGCAGCTTCTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGCCTGGGGAATAGGTAGGGGACAGATGTTACTGTGCAGCTTCTA  1092

seq1  CATCAGAGAATTC  1110
      |||||||||||||
seq2  CATCAGAGAATTC  1105