BAC Information

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BAC

Clone NameB6Ng01-152F17
Chromosome1 (Build37)
Map Location 68,310,697 - 68,311,950
singlet/doubletsinglet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F17.bB6Ng01-152F17.g
ACCDH947951DH947952
length1,2211,176
definitionDH947951|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F17, 5' end.DH947952|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgactggttacaggagaaggccagtttcacctccatatctcca
tattctccattgctaggaatcttgctataatcaacttcatagattcctaa
gagtttacagtgcactagatttctagcccatcccagagatgcagggagac
aatctttatgatctcatttcattggactatttgtggttgaacagctcacg
atgccttttaatccccaagagaatctattggctcttaaatctattgttac
tcttatttgaataaaattttaccatatttaaagaacttacctaaataaca
aacagttgaagctgttcttattgtcaaagttaaagtctttgactccattg
gcaactttgagtacattgttaggattttgttttaataaagttaaaaagca
gggtttttttttcaacaacacttatctatagcaaggataaattaagaaac
ataactatcctcacaaggaggcatgttgcaatctcttcttcattatcttt
gtttatattattataaggttctccgaaaggacacaaaatgagatccaatg
gtagttggatatgtttctggataagtaaaagacatgttaatttaatttcc
atatttaagtattagagacaatgatgattacaatttggtagaggggctaa
atagacggctcattgcttaagagtccatactgctctttctgagaacttaa
atttagttcccagcatccatatcaggcaacaaaccaccatctgtttctct
aactccaaggcatctggcaatccttttctttcctctgtgggtactgaaac
ctttgtcatatcctacaattatattaaaaatacttggtagaaataataat
gaaatctggctttagactatgtgtcacatgcgcgcagcgcacatacacac
acacacacacacacacactatgtgcagaatggcactttagagatagaggg
tatatgcatgagtactttgactagtatgacttgtaggactggacaaagtg
gggaagttatcatacatgtatttgattaatgctggcattagtcccgttga
ttctcccagttctccacgaacgaaattggtgaaacaaaaaccttccacct
gcatattatatagtttaaggaggtccttggggttaattggttcggaggac
actcacctcacagtgaagccctactgctgggacaaaattgggggccttgg
acctggggaaggggagaaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggatctcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacatccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagctagagaaagtacccaagagctaatggatctgcaccctatag
gtggatcacattatgaactaaccagtaccccggagctcttgactctagct
gcatatgtatcaaagatgctagtccggccatcactggaaaagaaagccca
ttggaccgctaactcatatgtctcagttcaggaattgccagggccaaaat
gtggaatgggtgtgatgatgtatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68310697_68311950
seq2: B6Ng01-152F17.b_44_1264 (reverse)

seq1  TTTTCCTCCCCACTTTTCCCCAGGGCCACAAGACCCCCCCCCATTATTTT  50
      |||| ||||||    ||||||||| |  |||| |||||       |||||
seq2  TTTTTCTCCCC----TTCCCCAGGTC--CAAGGCCCCC------AATTTT  38

seq1  GTTCCCAACAAGGTTATGTGCCTCCAACTAGTTGAGTGTAGTGTCACTAC  100
      | ||||| ||  ||   | || ||  |||   ||||   |||||| || |
seq2  G-TCCCAGCA--GT--AGGGCTTC--ACT--GTGAGGTGAGTGTC-CTCC  78

seq1  GAAACAAATTAAACACACAAGAACATCCCTTAAACTAATAAAAATTATGC  150
      | ||| ||||||   | |||| || | ||||||||| ||| ||  |||||
seq2  G-AACCAATTAA--CCCCAAGGACCT-CCTTAAACT-ATATAA--TATGC  121

seq1  AGTTGGAAAGTATCTGCTCTACCAATTTCGTTCGT-GAGAACTGAG-GAA  198
      || ||||| || | || |  ||||||||||||||| |||||||| | |||
seq2  AGGTGGAAGGTTTTTGTTTCACCAATTTCGTTCGTGGAGAACTGGGAGAA  171

seq1  TACAACGTGACTAATGCCAGCATTAAATCAAATACATGTAATGAATATAC  248
      | ||||| |||||||||||||||| |||||||||||||| ||| ||| ||
seq2  T-CAACGGGACTAATGCCAGCATT-AATCAAATACATGT-ATG-ATA-AC  216

seq1  TTCCCCACTTTGTCCAGTCCTACAAGTCATACTAGTCAAAGTACTCATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACTTTGTCCAGTCCTACAAGTCATACTAGTCAAAGTACTCATGC  266

seq1  ATATACCCTCTATTCTCTAAAGTGCCATTCTGCACATAGTGTGTGTGTGT  348
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATATACCCTCTA-TCTCTAAAGTGCCATTCTGCACATAGTGTGTGTGTGT  315

seq1  GTGTGTGTGTGTATGTGCGCTGCGCGCATGTGACACATAGTCTAAAGCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTATGTGCGCTGCGCGCATGTGACACATAGTCTAAAGCCA  365

seq1  GATTTCATTATTATTTCTACCAAGTATTTTTAATATAATTGTAGGATATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTATTATTTCTACCAAGTATTTTTAATATAATTGTAGGATATG  415

seq1  ACAAAGGTTTCAGTACCCACAGAGGAAAGAAAAGGATTGCCAGATGCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTTTCAGTACCCACAGAGGAAAGAAAAGGATTGCCAGATGCCTT  465

seq1  GGAGTTAGAGAAACAGATGGTGGTTTGTTGCCTGATATGGATGCTGGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAGAGAAACAGATGGTGGTTTGTTGCCTGATATGGATGCTGGGAA  515

seq1  CTAAATTTAAGTTCTCAGAAAGAGCAGTATGGACTCTTAAGCAATGAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTTAAGTTCTCAGAAAGAGCAGTATGGACTCTTAAGCAATGAGCC  565

seq1  GTCTATTTAGCCCCTCTACCAAATTGTAATCATCATTGTCTCTAATACTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTAGCCCCTCTACCAAATTGTAATCATCATTGTCTCTAATACTT  615

seq1  AAATATGGAAATTAAATTAACATGTCTTTTACTTATCCAGAAACATATCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGAAATTAAATTAACATGTCTTTTACTTATCCAGAAACATATCC  665

seq1  AACTACCATTGGATCTCATTTTGTGTCCTTTCGGAGAACCTTATAATAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCATTGGATCTCATTTTGTGTCCTTTCGGAGAACCTTATAATAAT  715

seq1  ATAAACAAAGATAATGAAGAAGAGATTGCAACATGCCTCCTTGTGAGGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAGATAATGAAGAAGAGATTGCAACATGCCTCCTTGTGAGGAT  765

seq1  AGTTATGTTTCTTAATTTATCCTTGCTATAGATAAGTGTTGTTGAAAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTTTCTTAATTTATCCTTGCTATAGATAAGTGTTGTTGAAAAAA  815

seq1  AAACCCTGCTTTTTAACTTTATTAAAACAAAATCCTAACAATGTACTCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGCTTTTTAACTTTATTAAAACAAAATCCTAACAATGTACTCAA  865

seq1  AGTTGCCAATGGAGTCAAAGACTTTAACTTTGACAATAAGAACAGCTTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCAATGGAGTCAAAGACTTTAACTTTGACAATAAGAACAGCTTCA  915

seq1  ACTGTTTGTTATTTAGGTAAGTTCTTTAAATATGGTAAAATTTTATTCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGTTATTTAGGTAAGTTCTTTAAATATGGTAAAATTTTATTCAA  965

seq1  ATAAGAGTAACAATAGATTTAAGAGCCAATAGATTCTCTTGGGGATTAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGTAACAATAGATTTAAGAGCCAATAGATTCTCTTGGGGATTAAA  1015

seq1  AGGCATCGTGAGCTGTTCAACCACAAATAGTCCAATGAAATGAGATCATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCGTGAGCTGTTCAACCACAAATAGTCCAATGAAATGAGATCATA  1065

seq1  AAGATTGTCTCCCTGCATCTCTGGGATGGGCTAGAAATCTAGTGCACTGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTCTCCCTGCATCTCTGGGATGGGCTAGAAATCTAGTGCACTGT  1115

seq1  AAACTCTTAGGAATCTATGAAGTTGATTATAGCAAGATTCCTAGCAATGG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTAGGAATCTATGAAGTTGATTATAGCAAGATTCCTAGCAATGG  1165

seq1  AGAATATGGAGATATGGAGGTGAAACTGGCCTTCTCCTGTAACCAGTCAA  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGGAGATATGGAGGTGAAACTGGCCTTCTCCTGTAACCAGTCAA  1215

seq1  GAATTC  1254
      ||||||
seq2  GAATTC  1221