BAC Information

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BAC

Clone NameB6Ng01-153L24
Chromosome1 (Build37)
Map Location 151,661,489 - 151,791,028
singlet/doubletdoublet
Overlap genePla2g4a
Upstream geneLOC100042792, LOC435647, LOC100042813
Downstream genePtgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153L24.bB6Ng01-153L24.g
ACCDH948973DH948974
length1,0711,176
definitionDH948973|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L24, 5' end.DH948974|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,789,947 - 151,791,028)(151,661,489 - 151,662,694)
sequence
gaattctctagtcctgtatgctatgccttaagcaatacagtcttatgatt
tactcctggcaggcaaccagcagcagatacagtagctctcagggttctct
ctggccaggctgaccttgaacctataatcttcctgacacagcctaccaag
tgcttggatttcagatctgtgatgcctcatctggtttcacgttcattgtt
gatagagatagggtttgaaattttctctgccactgaggtttctgtttaac
tgcatctcatttctctattgacttctttttagtcttctggtccctgtaat
cggtagctactttctggtgatcctgtttgtttgtttgtttgtttgtttgt
ttcattttggcctggtggttcatttagataattttgttaatgatatttca
atgatatttgaatgagtttgttagtagctctaggaattaagctaatgtat
taatttattacagttttcttcatgtgagttttaacttattcttgtaaaat
agtctttccatgtagttacagggcttctttacttatttggctattgctgt
tacatgtatcatatctgcattattataaatcatgtttctataaacctcat
ccttctataaaatatagagataaaactaagacatattgagtctgatattc
ttcatttcttcctgtgaattcagatcatctgttgtcatttccttactcca
atatagctacatttataactatatatatagtgaaaaataaaaaataaaac
atgatcaacagaataggccattatactgatattctgtctgctcatatttc
tgaaagagtttggtggctccgtttttctcagtgtacagcttgattctttc
tgtactttgaccatgtgatcccactgccttcaggatgttgttggttccaa
tgagaagcatttgttgatctttggttatctcatgcatgggcagctgttat
tttcttgctcttaaaatcttctctattctttgaattcacaagtggatttt
ggtgtctagacaaaatcttccttgtattttatccacttggagaactgagc
ttatgaatttttaaatgaggt
gaattcaaaatatgtactcatgcatgaatacataggctaaaataatctga
aaattcatgaatatgcattgttctttgagagctaatatttatgataagcc
ataaaatagttatttttcattattctgagacacagtgcttcaagaacaag
tagttagccaggtgggttggcacatgcctgtaaagagtgccattagtgag
tttgaggcaagaagatcaggaattcaaggtcttgcagcctacatagtgag
ttcaaagccagcttgggctatgtcatagttatgtctctactgctgtaata
aaacacataatgcgaagtgacttggaaagcaaaggatttattttaccaga
caactctctggtctcaccccattactgaggaaagtcggagcaagaactca
aggcaggaaccaggaggcaggaatggaagtagaagccatggaggggtgct
gccttgctccccatgggtttttccccgtgggttgctcagcctgctctctc
atattatcaggatcacagaataacctgctcaggattgaaacaacccacaa
taagctgggctctcccatgtcaatcatcaataaaaaaaaatgccgtacag
gccacacctatagaggtattttctgaattactactaaaattccttctttc
tacatgaccctagcttgtgtttaattgacataaacctagccagttcaggc
aacatgagctatatgaaagtatctaagagaaaaaagaaaggaaatgggaa
gaaaactatcccttgtattatttaataagtactgaaatgattctttgtaa
attctttctaaagagtcaaaactttgagtttctcatattattgaaatgaa
aacactgagagaacaaatagaaaagttccccttcttaatgttatcctctt
gtgtaactggaaaagaaaagtcgtgtgggaggagttggggctggggaaga
acatattgtaaggaaaccgatcttcaattaaaataaaaaaaagaagaaga
gccaggaaaagggcagagctggtcccatgtgcagccagagatcactagaa
taacatgtcatgacattctgagtagccactttggtattccactctggtaa
gcatctgacctacacccatagcggtaacttgaagtccgagcaacatgtac
attgaacttagtgctttgccggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151789947_151791028
seq2: B6Ng01-153L24.b_45_1115 (reverse)

seq1  ACCTCATTTAAAAACATTTCAATAAAGCTCAGTTCCTCCAAGTGGGATAA  50
      ||||||||||||||   ||||   |||||||||| ||||||||||   ||
seq2  ACCTCATTTAAAAA---TTCA--TAAGCTCAGTT-CTCCAAGTGGATAAA  44

seq1  ATACAAAGAAGAATGTTGTCTAGACA-CATAATCCACCTGGTGAAATTCA  99
      |||||| |||| || ||||||||||| || |||||| || ||| ||||||
seq2  ATACAAGGAAG-ATTTTGTCTAGACACCAAAATCCA-CTTGTG-AATTCA  91

seq1  AAGAAATAGAGAAGAATTTTAAGAGCAAGAAAATAACAGCTGCCCATGCA  149
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAG-AATAGAGAAG-ATTTTAAGAGCAAGAAAATAACAGCTGCCCATGCA  139

seq1  TGAGATAACCAAAGATCAACAAATGCCTTCTCATTGGAACCAACAACATC  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGAGATAACCAAAGATCAACAAATG-CTTCTCATTGGAACCAACAACATC  188

seq1  CTGAAGGCAGTGGGATCACATGGTCAAAGTACAGAAAGAATCAAGCTGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCAGTGGGATCACATGGTCAAAGTACAGAAAGAATCAAGCTGTA  238

seq1  CACTGAGAAAAACGGAGCCACCAAACTCTTTCAGAAATATGAGCAGACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGAAAAACGGAGCCACCAAACTCTTTCAGAAATATGAGCAGACAG  288

seq1  AATATCAGTATAATGGCCTATTCTGTTGATCATGTTTTATTTTTTATTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGTATAATGGCCTATTCTGTTGATCATGTTTTATTTTTTATTTT  338

seq1  TCACTATATATATAGTTATAAATGTAGCTATATTGGAGTAAGGAAATGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATATATATAGTTATAAATGTAGCTATATTGGAGTAAGGAAATGAC  388

seq1  AACAGATGATCTGAATTCACAGGAAGAAATGAAGAATATCAGACTCAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGATCTGAATTCACAGGAAGAAATGAAGAATATCAGACTCAATA  438

seq1  TGTCTTAGTTTTATCTCTATATTTTATAGAAGGATGAGGTTTATAGAAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGTTTTATCTCTATATTTTATAGAAGGATGAGGTTTATAGAAAC  488

seq1  ATGATTTATAATAATGCAGATATGATACATGTAACAGCAATAGCCAAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTATAATAATGCAGATATGATACATGTAACAGCAATAGCCAAATA  538

seq1  AGTAAAGAAGCCCTGTAACTACATGGAAAGACTATTTTACAAGAATAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGAAGCCCTGTAACTACATGGAAAGACTATTTTACAAGAATAAGT  588

seq1  TAAAACTCACATGAAGAAAACTGTAATAAATTAATACATTAGCTTAATTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCACATGAAGAAAACTGTAATAAATTAATACATTAGCTTAATTC  638

seq1  CTAGAGCTACTAACAAACTCATTCAAATATCATTGAAATATCATTAACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCTACTAACAAACTCATTCAAATATCATTGAAATATCATTAACAA  688

seq1  AATTATCTAAATGAACCACCAGGCCAAAATGAAACAAACAAACAAACAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTAAATGAACCACCAGGCCAAAATGAAACAAACAAACAAACAAA  738

seq1  CAAACAAACAGGATCACCAGAAAGTAGCTACCGATTACAGGGACCAGAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAGGATCACCAGAAAGTAGCTACCGATTACAGGGACCAGAAG  788

seq1  ACTAAAAAGAAGTCAATAGAGAAATGAGATGCAGTTAAACAGAAACCTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGAAGTCAATAGAGAAATGAGATGCAGTTAAACAGAAACCTCA  838

seq1  GTGGCAGAGAAAATTTCAAACCCTATCTCTATCAACAATGAACGTGAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGAGAAAATTTCAAACCCTATCTCTATCAACAATGAACGTGAAAC  888

seq1  CAGATGAGGCATCACAGATCTGAAATCCAAGCACTTGGTAGGCTGTGTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGGCATCACAGATCTGAAATCCAAGCACTTGGTAGGCTGTGTCA  938

seq1  GGAAGATTATAGGTTCAAGGTCAGCCTGGCCAGAGAGAACCCTGAGAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTATAGGTTCAAGGTCAGCCTGGCCAGAGAGAACCCTGAGAGCT  988

seq1  ACTGTATCTGCTGCTGGTTGCCTGCCAGGAGTAAATCATAAGACTGTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATCTGCTGCTGGTTGCCTGCCAGGAGTAAATCATAAGACTGTATT  1038

seq1  GCTTAAGGCATAGCATACAGGACTAGAGAATTC  1082
      |||||||||||||||||||||||||||||||||
seq2  GCTTAAGGCATAGCATACAGGACTAGAGAATTC  1071

seq1: chr1_151661489_151662694
seq2: B6Ng01-153L24.g_69_1244

seq1  GAATTCAAAATATGTACTCATGCATGAATACATAGGCTAAAATAATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATGTACTCATGCATGAATACATAGGCTAAAATAATCTGA  50

seq1  AAATTCATGAATATGCATTGTTCTTTGAGAGCTAATATTTATGATAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGAATATGCATTGTTCTTTGAGAGCTAATATTTATGATAAGCC  100

seq1  ATAAAATAGTTATTTTTCATTATTCTGAGACACAGTGCTTCAAGAACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAGTTATTTTTCATTATTCTGAGACACAGTGCTTCAAGAACAAG  150

seq1  TAGTTAGCCAGGTGGGTTGGCACATGCCTGTAAAGAGTGCCATTAGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGCCAGGTGGGTTGGCACATGCCTGTAAAGAGTGCCATTAGTGAG  200

seq1  TTTGAGGCAAGAAGATCAGGAATTCAAGGTCTTGCAGCCTACATAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAAGAAGATCAGGAATTCAAGGTCTTGCAGCCTACATAGTGAG  250

seq1  TTCAAAGCCAGCTTGGGCTATGTCATAGTTATGTCTCTACTGCTGTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCCAGCTTGGGCTATGTCATAGTTATGTCTCTACTGCTGTAATA  300

seq1  AAACACATAATGCGAAGTGACTTGGAAAGCAAAGGATTTATTTTACCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAATGCGAAGTGACTTGGAAAGCAAAGGATTTATTTTACCAGA  350

seq1  CAACTCTCTGGTCTCACCCCATTACTGAGGAAAGTCGGAGCAAGAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTGGTCTCACCCCATTACTGAGGAAAGTCGGAGCAAGAACTCA  400

seq1  AGGCAGGAACCAGGAGGCAGGAATGGAAGTAGAAGCCATGGAGGGGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAACCAGGAGGCAGGAATGGAAGTAGAAGCCATGGAGGGGTGCT  450

seq1  GCCTTGCTCCCCATGGGTTTTTCCCCGTGGGTTGCTCAGCCTGCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTCCCCATGGGTTTTTCCCCGTGGGTTGCTCAGCCTGCTCTCTC  500

seq1  ATATTATCAGGATCACAGAATAACCTGCTCAGGATTGAAACAACCCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCAGGATCACAGAATAACCTGCTCAGGATTGAAACAACCCACAA  550

seq1  TAAGCTGGGCTCTCCCATGTCAATCATCAATAAAAAAAAATGCCGTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGGGCTCTCCCATGTCAATCATCAATAAAAAAAAATGCCGTACAG  600

seq1  GCCACACCTATAGAGGTATTTTCTGAATTACTACTAAAATTCCTTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCTATAGAGGTATTTTCTGAATTACTACTAAAATTCCTTCTTTC  650

seq1  TACATGACCCTAGCTTGTGTTTAATTGACATAAACCTAGCCAGTTCAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACCCTAGCTTGTGTTTAATTGACATAAACCTAGCCAGTTCAGGC  700

seq1  AACATGAGCTATATGAAAGTATCTAAGAGAAAAAAGAAAGGAAATGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGCTATATGAAAGTATCTAAGAGAAAAAAGAAAGGAAATGGGAA  750

seq1  GAAAACTATCCCTTGTATTATTTAATAAGTACTGAAATGATTCTTTGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTATCCCTTGTATTATTTAATAAGTACTGAAATGATTCTTTGTAA  800

seq1  ATTCTTTCTAAAGAGTCAAAACTTTGAGTTTCTCATATTATTGAAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTAAAGAGTCAAAACTTTGAGTTTCTCATATTATTGAAATGAA  850

seq1  AACACTGAGAGAACAAATAGAAAAGTTCCCCTTCTTAATGTTATCCTCTT  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACACTGAGAGAACAAATAGAAAAGTTCCCCTTCTTAATGTTATCCTC-T  899

seq1  TGTGTTAACTGGAAAAGAAAAGTCGTGTGGGAGGAGTTGGGGCTGGGGAA  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTG-TAACTGGAAAAGAAAAGTCGTGTGGGAGGAGTTGGGGCTGGGGAA  948

seq1  GAACATATTGTAAAGGAAAACCGATCTTCAATTAAAAAAAAAAAAAAAAG  1000
      |||||||||||||  | |||||||||||||||||||| |||||||| |||
seq2  GAACATATTGTAA--GGAAACCGATCTTCAATTAAAATAAAAAAAAGAAG  996

seq1  AAGAAGAAGCCAGGAAAAAGGGCAGAGCTGTCCACATGTGCAAGCAAGAA  1050
      |||    ||||||| |||||||||||||||  | ||||||| ||| || |
seq2  AAG----AGCCAGG-AAAAGGGCAGAGCTGGTCCCATGTGC-AGCCAG-A  1039

seq1  GATCACTAGATTACAATGTCATTGAACATTTCTGAGTAGCCACTTTGTTA  1100
      |||||||||| ||  |||||||   ||| |||||||||||||||||| ||
seq2  GATCACTAGAATAACATGTCAT--GACA-TTCTGAGTAGCCACTTTGGTA  1086

seq1  TTTCATCCTTGGGTTAGCATCTGACACTACAGCCATAGGCGGGTTACTTG  1150
      || ||  ||  ||| |||||||||| ||||| ||||||   ||| |||||
seq2  TTCCA--CTCTGGTAAGCATCTGAC-CTACACCCATAG--CGGTAACTTG  1131

seq1  AAAGTCCCTGACAGCATGTGACATTTGTAAAGCTTTAAGGTTGCTTTGCC  1200
       ||||||  | || ||||| |||||     | |||  ||  |||||||||
seq2  -AAGTCCGAG-CAACATGT-ACATT----GAACTT--AG--TGCTTTGCC  1170

seq1  TGTGTG  1206
       |||||
seq2  GGTGTG  1176