BAC Information

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BAC

Clone NameB6Ng01-153O17
Chromosome1 (Build37)
Map Location 67,568,848 - 67,775,135
singlet/doubletdoublet
Overlap geneKif22-ps
Upstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153O17.bB6Ng01-153O17.g
ACCDH949100DH949101
length994281
definitionDH949100|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O17, 5' end.DH949101|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,774,138 - 67,775,135)(67,568,848 - 67,569,128)
sequence
gaattctgtccatggaatcagtttggaaaaagtctgtggaaacagtattc
ttttttaaagagacactgcctacagtgtcataatgaaagagaaattaaca
ggacgagaatctagcaaccacggatgaagttgtcactacatgctgtggat
cttgggatttttatcctggagcaaggattcggtgaaaattaccatttgcc
tttaatcagaaaatagtggttcgaatacatggaaaaatcaattctaaacg
cagagttcaggatgtattaaaaggactagctgatttgaatatagtcgggg
agaaaattaatttagtggttatgggaatgcagagcagaaagcaacatcag
aaaatgtatcttcactgaagagagagtactatgtggtgtgttggttcctg
agggaatgagtaggtgaggaaaagcaattttctacccaatttattaagta
gatattaatttggctttcatgaaagagactagaaggagagactttggctc
tattttagggctagtatagaacactggtaatagagtcatttgggggaggt
taagattttattaaaacttacaagggttattacttgcaaatgaaaattta
gttttcttcaaggaagtcacactggggaaacaaactgcttttagggtagg
ctgaatgcctagcagtagatggtcaacagaaaccaaattcaacagtatct
tcggaagttcctagtcttgtagtgtcatgtctgggcttttcctttcctta
ttttttttcagttttgtcttattgtttatttttcttctctcattctatcc
cacagatcctttgtccatataatatggcttctagttagtacttttatggg
attcctgaatgtgtgaaagagtggggtttctgcattcttatctgtgtctt
atgtcttttcttgggctccatttaaaaatatggttcatctcttgtgatct
cccctttcacctactcttcctcttctctccttcgtttccttccg
tttagttattcttcaataaaatctcccatttcctaaaataattttaatat
ttttgatcgatagaactcacactgtaatttggtgaaacacatttgctgtt
ggtgggcttttcacgcgacttgtgcattatttatgatcaatggggctagg
ggcttattcacagtcctaaaaaagaagtgatcaattttttcagactgccc
tatgtatgcctttttgcctgcctgccttctctctctctctctctctctct
ctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67774138_67775135
seq2: B6Ng01-153O17.b_43_1036 (reverse)

seq1  CGGAAGGAAAAGAAGGAGAAGAAGAGGAAGAGGAAGAGAAAAGGGAAGAT  50
      |||||||||| ||||||| ||||||||||||| | | | |||||| ||||
seq2  CGGAAGGAAACGAAGGAG-AGAAGAGGAAGAGTAGGTG-AAAGGGGAGAT  48

seq1  CAACAAGAGAAGAAACATATTTTTTAAATGGAGCCCAAGAAAAGACATAA  100
      | |||||||| ||| |||| ||||||||||||||||||||||||||||||
seq2  C-ACAAGAGATGAACCATA-TTTTTAAATGGAGCCCAAGAAAAGACATAA  96

seq1  GACACAGATAAGAATGCAGAAA-CCCACTCTTTCACACATTCAGGAATCC  149
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GACACAGATAAGAATGCAGAAACCCCACTCTTTCACACATTCAGGAATCC  146

seq1  CATAAAAGTACTAAACTAGAAGCCATATTATATGGACAAAGGATCTGTGG  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGTACT-AACTAGAAGCCATATTATATGGACAAAGGATCTGTGG  195

seq1  GATAGAATGAGAGAAGAAAAATAAACAATAAGACAAAACTGAAAAAAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATGAGAGAAGAAAAATAAACAATAAGACAAAACTGAAAAAAAAT  245

seq1  AAGGAAAGGAAAAGCCCAGACATGACACTACAAGACTAGGAACTTCCGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGAAAAGCCCAGACATGACACTACAAGACTAGGAACTTCCGAA  295

seq1  GATACTGTTGAATTTGGTTTCTGTTGACCATCTACTGCTAGGCATTCAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGTTGAATTTGGTTTCTGTTGACCATCTACTGCTAGGCATTCAGC  345

seq1  CTACCCTAAAAGCAGTTTGTTTCCCCAGTGTGACTTCCTTGAAGAAAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTAAAAGCAGTTTGTTTCCCCAGTGTGACTTCCTTGAAGAAAACT  395

seq1  AAATTTTCATTTGCAAGTAATAACCCTTGTAAGTTTTAATAAAATCTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCATTTGCAAGTAATAACCCTTGTAAGTTTTAATAAAATCTTAA  445

seq1  CCTCCCCCAAATGACTCTATTACCAGTGTTCTATACTAGCCCTAAAATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCAAATGACTCTATTACCAGTGTTCTATACTAGCCCTAAAATAG  495

seq1  AGCCAAAGTCTCTCCTTCTAGTCTCTTTCATGAAAGCCAAATTAATATCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGTCTCTCCTTCTAGTCTCTTTCATGAAAGCCAAATTAATATCT  545

seq1  ACTTAATAAATTGGGTAGAAAATTGCTTTTCCTCACCTACTCATTCCCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAATTGGGTAGAAAATTGCTTTTCCTCACCTACTCATTCCCTC  595

seq1  AGGAACCAACACACCACATAGTACTCTCTCTTCAGTGAAGATACATTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCAACACACCACATAGTACTCTCTCTTCAGTGAAGATACATTTTC  645

seq1  TGATGTTGCTTTCTGCTCTGCATTCCCATAACCACTAAATTAATTTTCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTGCTTTCTGCTCTGCATTCCCATAACCACTAAATTAATTTTCTC  695

seq1  CCCGACTATATTCAAATCAGCTAGTCCTTTTAATACATCCTGAACTCTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACTATATTCAAATCAGCTAGTCCTTTTAATACATCCTGAACTCTGC  745

seq1  GTTTAGAATTGATTTTTCCATGTATTCGAACCACTATTTTCTGATTAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAATTGATTTTTCCATGTATTCGAACCACTATTTTCTGATTAAAG  795

seq1  GCAAATGGTAATTTTCACCGAATCCTTGCTCCAGGATAAAAATCCCAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGTAATTTTCACCGAATCCTTGCTCCAGGATAAAAATCCCAAGA  845

seq1  TCCACAGCATGTAGTGACAACTTCATCCGTGGTTGCTAGATTCTCGTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCATGTAGTGACAACTTCATCCGTGGTTGCTAGATTCTCGTCCT  895

seq1  GTTAATTTCTCTTTCATTATGACACTGTAGGCAGTGTCTCTTTAAAAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTCTCTTTCATTATGACACTGTAGGCAGTGTCTCTTTAAAAAAG  945

seq1  AATACTGTTTCCACAGACTTTTTCCAAACTGATTCCATGGACAGAATTC  998
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTTTCCACAGACTTTTTCCAAACTGATTCCATGGACAGAATTC  994

seq1: chr1_67568848_67569128
seq2: B6Ng01-153O17.g_75_355

seq1  TTTAGTTATTCTTCAATAAAATCTCCCATTTCCTAAAATAATTTTAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTATTCTTCAATAAAATCTCCCATTTCCTAAAATAATTTTAATAT  50

seq1  TTTTGATCGATAGAACTCACACTGTAATTTGGTGAAACACATTTGCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCGATAGAACTCACACTGTAATTTGGTGAAACACATTTGCTGTT  100

seq1  GGTGGGCTTTTCACGCGACTTGTGCATTATTTATGATCAATGGGGCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTTTTCACGCGACTTGTGCATTATTTATGATCAATGGGGCTAGG  150

seq1  GGCTTATTCACAGTCCTAAAAAAGAAGTGATCAATTTTTTCAGACTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTCACAGTCCTAAAAAAGAAGTGATCAATTTTTTCAGACTGCCC  200

seq1  TATGTATGCCTTTTTGCCTGCCTGCCTTCTCTCTCTCTCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGCCTTTTTGCCTGCCTGCCTTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  281
      |||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  281