BAC Information

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BAC

Clone NameB6Ng01-153P16
Chromosome1 (Build37)
Map Location 172,738,130 - 172,893,955
singlet/doubletdoublet
Overlap geneAtf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b
Upstream geneLOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik, Nos1ap, LOC100040002, LOC640532, Olfml2b
Downstream geneFcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna, Cd244, Ly9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153P16.bB6Ng01-153P16.g
ACCDH949143DH949144
length1,122567
definitionDH949143|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P16, 5' end.DH949144|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(172,738,130 - 172,739,266)(172,893,383 - 172,893,955)
sequence
gaattcttcctgcaaaacaatgaaaagctgacaacctcaagaatgctgga
ataaagacctttgcctctagccagttcctgactcatacttgatgcacaca
ctctatggttgtcttccccttaaagtgctgtctcatgcaaaagcagagta
gccagctgggcctttcatggcatgctttagtctccctcctgcatatctca
catctcaaactccagatttcagatctagtcagggcctatcacctaaccca
aaataggagagggaaaaagaaccctctttccccaacacttgttgattctt
ttaaacaacatagcatttacaatgtctttgagataggaacttaccacttg
cagaaagggtgacttaactggcttttaaaatgaaaggggaaacacaatac
agaaatctataaactgcagcccaatctgccaggaagaagctactttccca
gggatacgacctgactcttgctcagaacaggggcttacaaatttcctgag
tacataagacaagcttataaatagggaggtgtctaaagatttactacaca
taatgatgttcttctccttcaggtcaatgccatgagtctttttttttttt
taaagatttatttatttattcattatatgtaagtacactgtagctgtcct
cagacactccagaagagggagtcagaccttgttacggatggttgtgagcc
accatgtggttgctgggatttgaactcctgaccttcagaaaagcagtcgg
gtgctctttcccactgagccatctcaccagccccgccatgagtcttctct
actgaatctccaccttattttttgagacagggtctttcagtgaatctctc
agcaagcccctgggatccactagatctgcttgtctctgcccactgcctaa
actggctattaaatagtgctgaggacccaagctcaaggtccaaagtagtt
actgtgaaatctacccactgaggcatctttccagccatatagtggtctga
gtagtgatgtttgctcattagcatatgtctagtttctccaatgtttctat
caacttatcctttattactttttgtatttggtctatttatccttgagaaa
tgacagtttcaaatagccacaa
actgtgtagaccaggctggcctcaaactcacagagatcttcttgcctttg
tctcctgggtgctgggattaaaggtctgctccattatgcccagccaaaag
atcacacctttaaaaggctggacgaacccaggaaagttgcaggggggttg
ttttatgtcacacctctgggtgtcctcttgggttagtcactatgggctgg
agatgtttctgggcaggggagctgggaattggggaagagaggtgttgctg
gtgtgaggggaaggtctctgttgcttttaactctgttctgaccctgctcc
ttgatcctgggctcaccccataatcctactaacttcctacgtgcccctcc
tagctctcccaggaaaccctgatcacagggaaatgggagaaacccttcca
gaggaagtaggtgagtacagacagccctctgggggctcagtgcctgtcag
cccagggcctccatctggactggagccaacaagcagcagcccatgttagt
tcagtgggagtgcaggagagggaggagccgtgggataaggttgggtctca
tatctcttggtcatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_172738130_172739266
seq2: B6Ng01-153P16.b_48_1169

seq1  GAATTCTTCCTGCAAAACAATGAAAAGCTGACAACCTCAAGAATGCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTGCAAAACAATGAAAAGCTGACAACCTCAAGAATGCTGGA  50

seq1  ATAAAGACCTTTGCCTCTAGCCAGTTCCTGACTCATACTTGATGCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGACCTTTGCCTCTAGCCAGTTCCTGACTCATACTTGATGCACACA  100

seq1  CTCTATGGTTGTCTTCCCCTTAAAGTGCTGTCTCATGCAAAAGCAGAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGTTGTCTTCCCCTTAAAGTGCTGTCTCATGCAAAAGCAGAGTA  150

seq1  GCCAGCTGGGCCTTTCATGGCATGCTTTAGTCTCCCTCCTGCATATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGGGCCTTTCATGGCATGCTTTAGTCTCCCTCCTGCATATCTCA  200

seq1  CATCTCAAACTCCAGATTTCAGATCTAGTCAGGGCCTATCACCTAACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAAACTCCAGATTTCAGATCTAGTCAGGGCCTATCACCTAACCCA  250

seq1  AAATAGGAGAGGGAAAAAGAACCCTCTTTCCCCAACACTTGTTGATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAGAGGGAAAAAGAACCCTCTTTCCCCAACACTTGTTGATTCTT  300

seq1  TTAAACAACATAGCATTTACAATGTCTTTGAGATAGGAACTTACCACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAACATAGCATTTACAATGTCTTTGAGATAGGAACTTACCACTTG  350

seq1  CAGAAAGGGTGACTTAACTGGCTTTTAAAATGAAAGGGGAAACACAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGGTGACTTAACTGGCTTTTAAAATGAAAGGGGAAACACAATAC  400

seq1  AGAAATCTATAAACTGCAGCCCAATCTGCCAGGAAGAAGCTACTTTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTATAAACTGCAGCCCAATCTGCCAGGAAGAAGCTACTTTCCCA  450

seq1  GGGATACGACCTGACTCTTGCTCAGAACAGGGGCTTACAAATTTCCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACGACCTGACTCTTGCTCAGAACAGGGGCTTACAAATTTCCTGAG  500

seq1  TACATAAGACAAGCTTATAAATAGGGAGGTGTCTAAAGATTTACTACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGACAAGCTTATAAATAGGGAGGTGTCTAAAGATTTACTACACA  550

seq1  TAATGATGTTCTTCTCCTTCAGGTCAATGCCATGAGTCTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGTTCTTCTCCTTCAGGTCAATGCCATGAGTCTTTTTTTTTTTT  600

seq1  TAAAGATTTATTTATTTATTCATTATATGTAAGTACACTGTAGCTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTTATTTATTTATTCATTATATGTAAGTACACTGTAGCTGTCCT  650

seq1  CAGACACTCCAGAAGAGGGAGTCAGACCTTGTTACGGATGGTTGTGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTCCAGAAGAGGGAGTCAGACCTTGTTACGGATGGTTGTGAGCC  700

seq1  ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCAGAAAAGCAGTCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCAGAAAAGCAGTCGG  750

seq1  GTGCTCTTTCCCACTGAGCCATCTCACCAGCCCCGCCATGAGTCTTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTTTCCCACTGAGCCATCTCACCAGCCCCGCCATGAGTCTTCTCT  800

seq1  ACTGAATCTCCACCTTATTTTTTGAGACAGGGTCTTTCAGTGAATCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCTCCACCTTATTTTTTGAGACAGGGTCTTTCAGTGAATCTCTC  850

seq1  AGCAAGCCCCTGGGATCCACTAGATCTGCTTGTCTCTGCCCACTGCCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCCCTGGGATCCACTAGATCTGCTTGTCTCTGCCCACTGCCTAA  900

seq1  ACTGGCTATTAAATAGTGCTGAGGACCCAAGCTCAAGGTCCAAAAGTAGT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTGGCTATTAAATAGTGCTGAGGACCCAAGCTCAAGGTCC-AAAGTAGT  949

seq1  TACTGTGAAATCTACCCACTGAGCCATCTTTCCAGCCAATATAGTTGGTC  1000
      ||||||||||||||||||||||| ||||||||||||| |||||| |||||
seq2  TACTGTGAAATCTACCCACTGAGGCATCTTTCCAGCC-ATATAG-TGGTC  997

seq1  TGAGTTAGTTGATGTTTTGCTCATTTTAGCATATGTCTAGTTTTCTCCAA  1050
      |||| ||| ||||| ||||||||  ||||||||||||||| |||||||  
seq2  TGAG-TAG-TGATG-TTTGCTCA--TTAGCATATGTCTAG-TTTCTCC--  1039

seq1  AATGTTCTAATCAACTTTATCTTTTATTACTTTTGTGTATTTGGGTTTCA  1100
      ||||||   |||||| ||||| |||||||||||| |||||||||   || 
seq2  AATGTTTCTATCAAC-TTATCCTTTATTACTTTT-TGTATTTGG---TCT  1084

seq1  TTTTATCTTTAGTAAGTGACAG-TTCAAATAGCCACAA  1137
       |||||| ||   || |||||| |||||||||||||||
seq2  ATTTATCCTTGAGAAATGACAGTTTCAAATAGCCACAA  1122

seq1: chr1_172893383_172893955
seq2: B6Ng01-153P16.g_70_642 (reverse)

seq1  GAACTGACCAAGAGATTTGAGACCCAGCCTTCTCCCACGGCTCCTCCCTC  50
      ||| |||||||||||| ||||||||| |||| ||||||||||||||||||
seq2  GAAATGACCAAGAGATATGAGACCCAACCTTATCCCACGGCTCCTCCCTC  50

seq1  TCCTGCACTCCCACTGAACTCACATGGGCTGCTGCTTGTTGGCTCCAGTC  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCCTGCACTCCCACTGAACTAACATGGGCTGCTGCTTGTTGGCTCCAGTC  100

seq1  CAGATGGAGGCCCTGGGCTGACAGGCACTGAGCCCCCAGAGGGCTGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGAGGCCCTGGGCTGACAGGCACTGAGCCCCCAGAGGGCTGTCTG  150

seq1  TACTCACCTACTTCCTCTGGAAGGGTTTCTCCCATTTCCCTGTGATCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACCTACTTCCTCTGGAAGGGTTTCTCCCATTTCCCTGTGATCAGG  200

seq1  GTTTCCTGGGAGAGCTAGGAGGGGCACGTAGGAAGTTAGTAGGATTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTGGGAGAGCTAGGAGGGGCACGTAGGAAGTTAGTAGGATTATGG  250

seq1  GGTGAGCCCAGGATCAAGGAGCAGGGTCAGAACAGAGTTAAAAGCAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCCCAGGATCAAGGAGCAGGGTCAGAACAGAGTTAAAAGCAACAG  300

seq1  AGACCTTCCCCTCACACCAGCAACACCTCTCTTCCCCAATTCCCAGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTCCCCTCACACCAGCAACACCTCTCTTCCCCAATTCCCAGCTCC  350

seq1  CCTGCCCAGAAACATCTCCAGCCCATAGTGACTAACCCAAGAGGACACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGAAACATCTCCAGCCCATAGTGACTAACCCAAGAGGACACCC  400

seq1  AGAGGTGTGACATAAAACAACCCCCCTGCAACTTTCCTGGGTTCGTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGTGACATAAAACAACCCCCCTGCAACTTTCCTGGGTTCGTCCAG  450

seq1  CCTTTTAAAGGTGTGATCTTTTGGCTGGGCATAATGGAGCAGACCTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAAGGTGTGATCTTTTGGCTGGGCATAATGGAGCAGACCTTTAA  500

seq1  TCCCAGCACCCAGGAGACAAAGGCAAGAAGATCTCTGTGAGTTTGAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACCCAGGAGACAAAGGCAAGAAGATCTCTGTGAGTTTGAGGCC  550

seq1  AGCCTGGTCTACACAGTGAATTC  573
      |||||||||||||||||||||||
seq2  AGCCTGGTCTACACAGTGAATTC  573