BAC Information

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BAC

Clone NameB6Ng01-154L05
Chromosome1 (Build37)
Map Location 151,972,901 - 152,066,283
singlet/doubletdoublet
Overlap geneLOC676712
Upstream geneLOC100042813, Pla2g4a, Ptgs2
Downstream geneLOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154L05.bB6Ng01-154L05.g
ACCDH949675DH949676
length1,173924
definitionDH949675|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L05, 5' end.DH949676|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,972,901 - 151,974,104)(152,065,358 - 152,066,283)
sequence
gaattcttggatcccatcaaataaggaagtgtttataaaagtttgagtga
gggctgaagagatggctcagtggtcaagaggaattgttcctcttccaggg
aatttgggttcaattcctaacatccatatagtggctcacaacagtctaac
tccagtcccagatggcctaacaccctcttctggatgccacagttaacggg
cacaatcgtagtgtatagacgcacaaaagtgaaaacttgaaaataaaagg
cctggatgaataaaaaacatggtgggaccaggaaaataactagatttcaa
aactggaaggagctatgtttattacttttcctgctgttatgaaaggaaaa
gaaaaccctatcctggaatccccagtaattgttgacactgatcccaatcc
aaaccacccaaggagagccaagagtaagtttgtttatactgtaactgtct
tttaagaaggtggagggggtgtgaacaattaacgtaaagggtaggagtaa
aaatgtttgtaaagaatcataaataaaatgagttcttaagtaactccctc
tgaatgaatctaactaatcctgccggtgctttcttggccttccaagcaaa
ctttatcaaatcaggaaatgtgtcatcaagatctgggctagacatgacaa
tggatggggggtaagccttctcctgtaagtcagtaggagattgctcaaac
tttcttagagttaaaaagttgtttgtcatatctcagaggttctcacacac
attgtcatcttctttcaccttgaattcgttgatccaattagttgtgtgtt
tgacttaagacatagaggtatcaatgaagtcagtttaataaaaaaatgga
gtggttcaaggagagacctggcttcaaaggaatagacagttataaaaatg
tacacttgaaacttgagaaacgagggagaaacaaaacattttaaaaaatg
gacaaagccaagcactacctttagaaagacatatagaaaacaaacagcaa
agacataaggaacttttgttgatcatattttatttaattactaagtgtct
cagtgcaaaatatatatcttcagctaaaataaataaataaacgaccacac
atgcttacaaatttcgataagaagagacccatagtttccaagcaagatga
agaataagttacctaggaatgaa
gaattcttcttagttacagaaaatgtaatcatccaaacaaatcctgtggc
cttgcactccctgttccaaacttccgttttcatcatcctgtctgttagaa
aagcatttcaggaagaagtgcttgcccagaggccaaggagattgtgtggg
cacaagtagctgcgtgttcactgaatgataatgactggagaaatttataa
ttagtaactgtctgaaagatctcactctaagggggcatacatcatctggg
cataagatgtgggtgtgtttgagatgggtaggtataaaaagaagctgggg
ccaagtttttgcattacaggcccctagattctattccagctgaagagtgc
atgtcctctgccttttgatctttccttttgcagtgatgaaaactgtgtac
taatattggatggggagttactggaaagggataggatattgaggagagca
ggtttgatgtatgagatcatatcctctacccagggagggtggagttcagc
cgagtgcttcttcattacataccaagactgtagtttcatgtgaagcagat
gtaatttaccttttgtggaatccttcgtgtgctggctactcttacatcaa
cttgacaccatctagagttatctgagaagaggggaagctcaatggaagaa
atgactctgtaagagtcagctgtgaggcattttctttagtgattgatgtg
gaagtaccagcccgtgtgggcagtgatatctctgggctggtggagatagg
ctctttaaaaattggggctgagtgaaaccatcaaagcaagtcagtaagca
gcacccttccatggcctctccaacattcagctcctgcctttagcatcctt
tctggttgaattcctgtcctaacttctttaacgatgaacagtgttgtggg
agtgtgagctgatggagaagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151972901_151974104
seq2: B6Ng01-154L05.b_43_1215

seq1  GAATTCTTGGATCCCATCAAATAAGGAAGTGTTTATAAAAGTTTGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGATCCCATCAAATAAGGAAGTGTTTATAAAAGTTTGAGTGA  50

seq1  GGGCTGAAGAGATGGCTCAGTGGTCAAGAGGAATTGTTCCTCTTCCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAAGAGATGGCTCAGTGGTCAAGAGGAATTGTTCCTCTTCCAGGG  100

seq1  AATTTGGGTTCAATTCCTAACATCCATATAGTGGCTCACAACAGTCTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGTTCAATTCCTAACATCCATATAGTGGCTCACAACAGTCTAAC  150

seq1  TCCAGTCCCAGATGGCCTAACACCCTCTTCTGGATGCCACAGTTAACGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCCAGATGGCCTAACACCCTCTTCTGGATGCCACAGTTAACGGG  200

seq1  CACAATCGTAGTGTATAGACGCACAAAAGTGAAAACTTGAAAATAAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCGTAGTGTATAGACGCACAAAAGTGAAAACTTGAAAATAAAAGG  250

seq1  CCTGGATGAATAAAAAACATGGTGGGACCAGGAAAATAACTAGATTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGAATAAAAAACATGGTGGGACCAGGAAAATAACTAGATTTCAA  300

seq1  AACTGGAAGGAGCTATGTTTATTACTTTTCCTGCTGTTATGAAAGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAGGAGCTATGTTTATTACTTTTCCTGCTGTTATGAAAGGAAAA  350

seq1  GAAAACCCTATCCTGGAATCCCCAGTAATTGTTGACACTGATCCCAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCTATCCTGGAATCCCCAGTAATTGTTGACACTGATCCCAATCC  400

seq1  AAACCACCCAAGGAGAGCCAAGAGTAAGTTTGTTTATACTGTAACTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACCCAAGGAGAGCCAAGAGTAAGTTTGTTTATACTGTAACTGTCT  450

seq1  TTTAAGAAGGTGGAGGGGGTGTGAACAATTAACGTAAAGGGTAGGAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGGTGGAGGGGGTGTGAACAATTAACGTAAAGGGTAGGAGTAA  500

seq1  AAATGTTTGTAAAGAATCATAAATAAAATGAGTTCTTAAGTAACTCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTGTAAAGAATCATAAATAAAATGAGTTCTTAAGTAACTCCCTC  550

seq1  TGAATGAATCTAACTAATCCTGCCGGTGCTTTCTTGGCCTTCCAAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATCTAACTAATCCTGCCGGTGCTTTCTTGGCCTTCCAAGCAAA  600

seq1  CTTTATCAAATCAGGAAATGTGTCATCAAGATCTGGGCTAGACATGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCAAATCAGGAAATGTGTCATCAAGATCTGGGCTAGACATGACAA  650

seq1  TGGATGGGGGGTAAGCCTTCTCCTGTAAGTCAGTAGGAGATTGCTCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGGGGGTAAGCCTTCTCCTGTAAGTCAGTAGGAGATTGCTCAAAC  700

seq1  TTTCTTAGAGTTAAAAAGTTGTTTGTCATATCTCAGAGGTTCTCACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGAGTTAAAAAGTTGTTTGTCATATCTCAGAGGTTCTCACACAC  750

seq1  ATTGTCATCTTCTTTCACCTTGAATTCGTTGATCCAATTAGTTGTGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATCTTCTTTCACCTTGAATTCGTTGATCCAATTAGTTGTGTGTT  800

seq1  TGACTTAAGACATAGAGGTATCAATGAAGTCAGTTTAATAAAAAAATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAGACATAGAGGTATCAATGAAGTCAGTTTAATAAAAAAATGGA  850

seq1  GTGGTTCAAGGAGAGACCTGGCTTCAAAGGAATAGACAGTTATAAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCAAGGAGAGACCTGGCTTCAAAGGAATAGACAGTTATAAAAATG  900

seq1  TACACTTGAAACTTGAGAAACGAGGGAGAAACAAAAACATTTTAAAAAAA  950
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  TACACTTGAAACTTGAGAAACGAGGGAGAAAC-AAAACATTTT-AAAAAA  948

seq1  TGGACAAAGCCAAGCACAACC-TTAGAAAGACAATATAGAAAAACAAAAC  999
      ||||||||||||||||| ||| |||||||||| ||||||||||   ||||
seq2  TGGACAAAGCCAAGCACTACCTTTAGAAAGAC-ATATAGAAAA--CAAAC  995

seq1  AGCAAAGACATAAGGAACTTTTGTTGAATTCATATTTTATTTAAATTACT  1049
      |||||||||||||||||||||||||||  ||||||||||||| |||||||
seq2  AGCAAAGACATAAGGAACTTTTGTTGA--TCATATTTTATTT-AATTACT  1042

seq1  AAGTGTCTCAAGGTGCAAAAATTAATATATC-TCAGCCTAAAAATAAAAT  1098
      ||||||||||  ||||||||    ||||||| |||||       ||||||
seq2  AAGTGTCTCA--GTGCAAAA---TATATATCTTCAGC-------TAAAAT  1080

seq1  AAAATAAAAACAGACACAAACAACAATGC-TACAGAATTTCCAGATAAAG  1147
      |||  || ||  ||| || ||    |||| |||| ||||||  ||| |||
seq2  AAATAAATAAACGAC-CACAC----ATGCTTACA-AATTTC--GAT-AAG  1121

seq1  AAGAGAACCCAATAGTTTCCAAAGCAAAGATGAAGAATAAGTTATCTAAA  1197
      ||||||  || ||||||||| |||| |||||||||||||||||| || | 
seq2  AAGAGA--CCCATAGTTTCC-AAGC-AAGATGAAGAATAAGTTACCT-AG  1166

seq1  GAATGAA  1204
      |||||||
seq2  GAATGAA  1173

seq1: chr1_152065358_152066283
seq2: B6Ng01-154L05.g_64_987 (reverse)

seq1  GAAGCTTCTCCATCAGCTCACACTTCCACATCACTGTTCATCGTTAAAAG  50
      |||||||||||||||||||||||| ||||| |||||||||||||| ||||
seq2  GAAGCTTCTCCATCAGCTCACACTCCCACAACACTGTTCATCGTT-AAAG  49

seq1  AAGTTAGGACAGGAATTCAAACAGGAAAGGATGCTAAAGGCAGGAGCTG-  99
      |||||||||||||||||||| || ||||||||||||||||||||||||| 
seq2  AAGTTAGGACAGGAATTCAACCA-GAAAGGATGCTAAAGGCAGGAGCTGA  98

seq1  ATGCTGGAGAGGCCATGGAAGGGTGCTGCTTACTGACTTGCTTTGATGGC  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGTTGGAGAGGCCATGGAAGGGTGCTGCTTACTGACTTGCTTTGATGG-  147

seq1  TTTCACTCAGCCCAATTTCTTAAAGAGCCTATCTCCACCAGCCCAGAGAT  199
      ||||||||||||| | || |||||||||||||||||||||||||||||||
seq2  TTTCACTCAGCCCCAATTTTTAAAGAGCCTATCTCCACCAGCCCAGAGAT  197

seq1  ATCACTGCCCACACGGGCTGGTACTTCCACATCAATCACTAAAGAAAATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGCCCACACGGGCTGGTACTTCCACATCAATCACTAAAGAAAATG  247

seq1  CCTCACAGCTGACTCTTACAGAGTCATTTCTTCCATTGAGCTTCCCCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGCTGACTCTTACAGAGTCATTTCTTCCATTGAGCTTCCCCTCT  297

seq1  TCTCAGATAACTCTAGATGGTGTCAAGTTGATGTAAGAGTAGCCAGCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATAACTCTAGATGGTGTCAAGTTGATGTAAGAGTAGCCAGCACA  347

seq1  CGAAGGATTCCACAAAAGGTAAATTACATCTGCTTCACATGAAACTACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGATTCCACAAAAGGTAAATTACATCTGCTTCACATGAAACTACAG  397

seq1  TCTTGGTATGTAATGAAGAAGCACTCGGCTGAACTCCACCCTCCCTGGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTATGTAATGAAGAAGCACTCGGCTGAACTCCACCCTCCCTGGGT  447

seq1  AGAGGATATGATCTCATACATCAAACCTGCTCTCCTCAATATCCTATCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATATGATCTCATACATCAAACCTGCTCTCCTCAATATCCTATCCC  497

seq1  TTTCCAGTAACTCCCCATCCAATATTAGTACACAGTTTTCATCACTGCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTAACTCCCCATCCAATATTAGTACACAGTTTTCATCACTGCAA  547

seq1  AAGGAAAGATCAAAAGGCAGAGGACATGCACTCTTCAGCTGGAATAGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGATCAAAAGGCAGAGGACATGCACTCTTCAGCTGGAATAGAAT  597

seq1  CTAGGGGCCTGTAATGCAAAAACTTGGCCCCAGCTTCTTTTTATACCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGCCTGTAATGCAAAAACTTGGCCCCAGCTTCTTTTTATACCTAC  647

seq1  CCATCTCAAACACACCCACATCTTATGCCCAGATGATGTATGCCCCCTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCAAACACACCCACATCTTATGCCCAGATGATGTATGCCCCCTTA  697

seq1  GAGTGAGATCTTTCAGACAGTTACTAATTATAAATTTCTCCAGTCATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGATCTTTCAGACAGTTACTAATTATAAATTTCTCCAGTCATTAT  747

seq1  CATTCAGTGAACACGCAGCTACTTGTGCCCACACAATCTCCTTGGCCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTGAACACGCAGCTACTTGTGCCCACACAATCTCCTTGGCCTCT  797

seq1  GGGCAAGCACTTCTTCCTGAAATGCTTTTCTAACAGACAGGATGATGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGCACTTCTTCCTGAAATGCTTTTCTAACAGACAGGATGATGAAA  847

seq1  ACGGAAGTTTGGAACAGGGAGTGCAAGGCCACAGGATTTGTTTGGATGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGTTTGGAACAGGGAGTGCAAGGCCACAGGATTTGTTTGGATGAT  897

seq1  TACATTTTCTGTAACTAAGAAGAATTC  926
      |||||||||||||||||||||||||||
seq2  TACATTTTCTGTAACTAAGAAGAATTC  924