BAC Information

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BAC

Clone NameB6Ng01-154M13
Chromosome1 (Build37)
Map Location 184,747,767 - 184,903,820
singlet/doubletdoublet
Overlap geneSusd4, Tlr5
Upstream geneLbr, EG433384, Enah, Srp9, EG625823, Degs1, 1700047M11Rik, Fbxo28, LOC435657, ENSMUSG00000073482, Trp53bp2, Capn2, LOC666624, Capn8, 4922505E12Rik
Downstream geneEG666649, 1700056E22Rik, Dusp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154M13.bB6Ng01-154M13.g
ACCDH949737DH949738
length1,1911,132
definitionDH949737|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M13, 5' end.DH949738|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(184,902,630 - 184,903,820)(184,747,767 - 184,748,905)
sequence
gaattcagttcccggaatgaagaatggaggcggaggctgtgaatctggtt
gccagataggtctaagcgagctaatgaatatagatttctgaagtaaccgt
cacttaacacagcactggagagtccacaggaaaacagccgaagttccaag
agatggggcagaccttgaaaggcatctcgattcaagacttcgatctggct
ttggcccaagtccaagatcctaagattgggcaggtttctgaaagcccctg
gaccaatggtcaagttagcatactgggtccccagctccagcaactggagc
cgctccaggagtggaaatgatgtggcaaccaccatactgatatagttgaa
gctgagcaggagcctctcagtggtagtattgaggatccagggaatctggg
tgaggttacagcctcggaaaaaggctatcctgccgtctgaagaacaggga
gatattaccaacacggggctggccatgaagatcacacctatgagcaagtc
aagttgacatgccatgatcctatgggaaaagagagaattaaaaacaacac
cacatcacagcctgaggctcggcacatgggtccccagcactggagggtac
tgtcccttggacccctttgctcaaatgactgcgcaaacattctgctggca
gattcttcttgtcttggtggaacagaaatgcccagtcttttcttcttgaa
cacttaatggtgcatattttacacacgggcaccagtactttacagatatt
tcatccaagctggggagatagctcagtgctagaggacttgtctagcatgt
gctaggttctaggttccctcccagaaccataaaagcagcaaacatagcag
caaaaagaggctatttatcacctcacgcaggcagtgtttgttcacccatt
tcagacctgctgagggaagttgaaagtcataaagacgaggcatttttact
ttctgttcatccaaggagccccatttctagctcccagaagcttagctgat
gatcggacaataaacatatctggtttctctgctgtattctgtcccagact
ctatctagcccatctcccaaagatcggagatcatagtacaggcactgagc
actcctatgcatctgataagatctgaattgatcccttaattaatgggtta
tagagctgcctcatgcctgacatccatgtccgtgtgggagt
gaattccctaagcacccaggggtccctgtcatgcttccaaccccgtggag
tagtaattccaaggctctggctgttgcagattagataacaagtctcagga
agcttctataattagccgaagttgatgtgtctctgaggggacgggaccag
cctagcaactgggattagaagctaggtgttccttctccagcaccagccag
ccaaaccttatcccgcagagagccctgctgagtgatttaatgcagtccct
ttttatgtgccctgcagaatggaggtttgggctgcattcagttcctagtc
tatcctagttgccagcaaatgagacaaattgtgggtcccataaaaaatta
aatagcagctgcttcattttcttcctatcgaactttgaaattacagggat
ctcatttgcacggcagctcaagatgtagaagcggggggcggcagggtcca
ggggttctacgttttaacggcaatcatatgttctctcagactgactgggt
taaaatattttgagcagccattcatgaactgaaccattagccgtgcaaat
agaggacatgattgcagttcatcctgttgggtggctaattaataattctg
tacaggtggaggagccaggactaatgtcagagatgaaattagggaatgaa
attagcattctgctaaatgctagggtgtggcattccatagcctgcctgca
ggaggatgacacagatggaaaccttttgcctggcttattttcatctgcga
ccttcctgcacatctttcttataacgggccttataatgataacagagcct
gcatcttgacaccagagagaacaggacttaatcaggttctgtgtcagaca
tttgggattttttttttttttactattttacaaggaaaccataacagaaa
aaaatgtgaatctatttctgagcaaacagaatctatttgcagtccccctc
ccctttgcattcatctaatttatcctggtagatgactgctcccagcccct
ctgtaccttcatcaagactgaagcaaccaatttctaccacgaatcttgac
gaaatctgcaagtaaagggactggtggctcaccctcctttatggcattta
tttataacttacacgtttgagagaggaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_184902630_184903820
seq2: B6Ng01-154M13.b_47_1237 (reverse)

seq1  ACTCCCACACGGCCATGCATGTCAGGCATGGAGCAGGCTC-ATAACCCAC  49
      |||||||||||| |||| ||||||||||||  ||| |||| |||||||| 
seq2  ACTCCCACACGGACATGGATGTCAGGCATGAGGCA-GCTCTATAACCCA-  48

seq1  TTAATTAAGGTGATCATATCAGATCCTTTATCAAGATGCATA-GAGTGCT  98
      |||||||||| |||||  |||||||  ||||| ||||||||| |||||||
seq2  TTAATTAAGG-GATCAATTCAGATC--TTATC-AGATGCATAGGAGTGCT  94

seq1  CAGTGCCTGTACTATGATCTCGGATCTTTGGGAGATGGGCTAGATAGAGT  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGTGCCTGTACTATGATCTCCGATCTTTGGGAGATGGGCTAGATAGAGT  144

seq1  CTGGGACAGAATACAGCAGAGAAACC-GATATGTTTATTGTCCGATCATC  197
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGGGACAGAATACAGCAGAGAAACCAGATATGTTTATTGTCCGATCATC  194

seq1  AGCTAAGCTTCTGGGAGCTAGGAATGGGGCTCCTTGGATGAACAG-AAGT  246
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  AGCTAAGCTTCTGGGAGCTAGAAATGGGGCTCCTTGGATGAACAGAAAGT  244

seq1  AAAAATGCCTCGTCTTTATGACTTTCAACTTCCCTCAGCAGGTCTGGAAT  296
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAAATGCCTCGTCTTTATGACTTTCAACTTCCCTCAGCAGGTCTGAAAT  294

seq1  GGGTGAACAAACACTGCCTGCGTG-GGTGATAAATAGCCTCTTTTTGCTG  345
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGGTGAACAAACACTGCCTGCGTGAGGTGATAAATAGCCTCTTTTTGCTG  344

seq1  CT-TGTTTGCTGCTTTTATGGTTCTGGGAGGGAACCTAGAACCTAGCACA  394
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTGCTGCTTTTATGGTTCTGGGAGGGAACCTAGAACCTAGCACA  394

seq1  TGCTAGACAAGTCCTCTAGCACTGAGCTATCTCCCCAGCTTGGATGAAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGACAAGTCCTCTAGCACTGAGCTATCTCCCCAGCTTGGATGAAAT  444

seq1  ATCTGTAAAGTACTGGTGCCCGTGTGTAAAATATGCACCATTAAGTGTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAAGTACTGGTGCCCGTGTGTAAAATATGCACCATTAAGTGTTC  494

seq1  AAGAAGAAAAGACTGGGCATTTCTGTTCCACCAAGACAAGAAGAATCTGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAAGACTGGGCATTTCTGTTCCACCAAGACAAGAAGAATCTGC  544

seq1  CAGCAGAATGTTTGCGCAGTCATTTGAGCAAAGGGGTCCAAGGGACAGTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAATGTTTGCGCAGTCATTTGAGCAAAGGGGTCCAAGGGACAGTA  594

seq1  CCCTCCAGTGCTGGGGACCCATGTGCCGAGCCTCAGGCTGTGATGTGGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAGTGCTGGGGACCCATGTGCCGAGCCTCAGGCTGTGATGTGGTG  644

seq1  TTGTTTTTAATTCTCTCTTTTCCCATAGGATCATGGCATGTCAACTTGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTAATTCTCTCTTTTCCCATAGGATCATGGCATGTCAACTTGAC  694

seq1  TTGCTCATAGGTGTGATCTTCATGGCCAGCCCCGTGTTGGTAATATCTCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATAGGTGTGATCTTCATGGCCAGCCCCGTGTTGGTAATATCTCC  744

seq1  CTGTTCTTCAGACGGCAGGATAGCCTTTTTCCGAGGCTGTAACCTCACCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTCAGACGGCAGGATAGCCTTTTTCCGAGGCTGTAACCTCACCC  794

seq1  AGATTCCCTGGATCCTCAATACTACCACTGAGAGGCTCCTGCTCAGCTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCTGGATCCTCAATACTACCACTGAGAGGCTCCTGCTCAGCTTC  844

seq1  AACTATATCAGTATGGTGGTTGCCACATCATTTCCACTCCTGGAGCGGCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATCAGTATGGTGGTTGCCACATCATTTCCACTCCTGGAGCGGCT  894

seq1  CCAGTTGCTGGAGCTGGGGACCCAGTATGCTAACTTGACCATTGGTCCAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCTGGAGCTGGGGACCCAGTATGCTAACTTGACCATTGGTCCAG  944

seq1  GGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGC  994

seq1  CAGATCGAAGTCTTGAATCGAGATGCCTTTCAAGGTCTGCCCCATCTCTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCGAAGTCTTGAATCGAGATGCCTTTCAAGGTCTGCCCCATCTCTT  1044

seq1  GGAACTTCGGCTGTTTTCCTGTGGACTCTCCAGTGCTGTGTTAAGTGACG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTCGGCTGTTTTCCTGTGGACTCTCCAGTGCTGTGTTAAGTGACG  1094

seq1  GTTACTTCAGAAATCTATATTCATTAGCTCGCTTAGACCTATCTGGCAAC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTCAGAAATCTATATTCATTAGCTCGCTTAGACCTATCTGGCAAC  1144

seq1  CAGATTCACAGCCTCCGCCTCCATTCTTCATTCCGGGAACTGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCACAGCCTCCGCCTCCATTCTTCATTCCGGGAACTGAATTC  1191

seq1: chr1_184747767_184748905
seq2: B6Ng01-154M13.g_70_1201

seq1  GAATTCCCTAAGCACCCAGGGGTCCCTGTCATGCTTCCAACCCCGTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAAGCACCCAGGGGTCCCTGTCATGCTTCCAACCCCGTGGAG  50

seq1  TAGTAATTCCAAGGCTCTGGCTGTTGCAGATTAGATAACAAGTCTCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTCCAAGGCTCTGGCTGTTGCAGATTAGATAACAAGTCTCAGGA  100

seq1  AGCTTCTATAATTAGCCGAAGTTGATGTGTCTCTGAGGGGACGGGACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTATAATTAGCCGAAGTTGATGTGTCTCTGAGGGGACGGGACCAG  150

seq1  CCTAGCAACTGGGATTAGAAGCTAGGTGTTCCTTCTCCAGCACCAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAACTGGGATTAGAAGCTAGGTGTTCCTTCTCCAGCACCAGCCAG  200

seq1  CCAAACCTTATCCCGCAGAGAGCCCTGCTGAGTGATTTAATGCAGTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTTATCCCGCAGAGAGCCCTGCTGAGTGATTTAATGCAGTCCCT  250

seq1  TTTTATGTGCCCTGCAGAATGGAGGTTTGGGCTGCATTCAGTTCCTAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGCCCTGCAGAATGGAGGTTTGGGCTGCATTCAGTTCCTAGTC  300

seq1  TATCCTAGTTGCCAGCAAATGAGACAAATTGTGGGTCCCATAAAAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGTTGCCAGCAAATGAGACAAATTGTGGGTCCCATAAAAAATTA  350

seq1  AATAGCAGCTGCTTCATTTTCTTCCTATCGAACTTTGAAATTACAGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAGCTGCTTCATTTTCTTCCTATCGAACTTTGAAATTACAGGGAT  400

seq1  CTCATTTGCACGGCAGCTCAAGATGTAGAAGCGGGGGGCGGCAGGGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGCACGGCAGCTCAAGATGTAGAAGCGGGGGGCGGCAGGGTCCA  450

seq1  GGGGTTCTACGTTTTAACGGCAATCATATGTTCTCTCAGACTGACTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCTACGTTTTAACGGCAATCATATGTTCTCTCAGACTGACTGGGT  500

seq1  TAAAATATTTTGAGCAGCCATTCATGAACTGAACCATTAGCCGTGCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTTGAGCAGCCATTCATGAACTGAACCATTAGCCGTGCAAAT  550

seq1  AGAGGACATGATTGCAGTTCATCCTGTTGGGTGGCTAATTAATAATTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACATGATTGCAGTTCATCCTGTTGGGTGGCTAATTAATAATTCTG  600

seq1  TACAGGTGGAGGAGCCAGGACTAATGTCAGAGATGAAATTAGGGAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGGAGGAGCCAGGACTAATGTCAGAGATGAAATTAGGGAATGAA  650

seq1  ATTAGCATTCTGCTAAATGCTAGGGTGTGGCATTCCATAGCCTGCCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATTCTGCTAAATGCTAGGGTGTGGCATTCCATAGCCTGCCTGCA  700

seq1  GGAGGATGACACAGATGGAAACCTTTTGCCTGGCTTATTTTCATCTGCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGACACAGATGGAAACCTTTTGCCTGGCTTATTTTCATCTGCGA  750

seq1  CCTTCCTGCACATCTTTCTTATAACGGGCCTTATAATGATAACAGAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGCACATCTTTCTTATAACGGGCCTTATAATGATAACAGAGCCT  800

seq1  GCATCTTGACACCAGAGAGAACAGGACTTAATCAGGTTCTGTGTCAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGACACCAGAGAGAACAGGACTTAATCAGGTTCTGTGTCAGACA  850

seq1  TTTGGGATTTTTTTTTTTTTTACTATTTTACAAGGAAACCATAACAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTGGGATTTTTTTTTTTTTTACTATTTTACAAGGAAACCATAACAG-AA  899

seq1  AAAAATGTTGAATCTATTTCTGAGCAAACAAGAATCTATTTGCAGTCCCC  950
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAATG-TGAATCTATTTCTGAGCAAAC-AGAATCTATTTGCAGTCCCC  947

seq1  CTCCCCTTTGCATTCATCTTAATTTATCCTGGTAGATGACTGCTCGCAGG  1000
      |||||||||||||||||| |||||||||||||||||||||||||| ||| 
seq2  CTCCCCTTTGCATTCATC-TAATTTATCCTGGTAGATGACTGCTCCCAGC  996

seq1  CACTCTGTACCTCCATCAAGACTGAAGCACACCATTTCTACCACGAATCT  1050
      | |||||||||| ||||||||||||||||  | |||||||||||||||||
seq2  CCCTCTGTACCTTCATCAAGACTGAAGCAACCAATTTCTACCACGAATCT  1046

seq1  GGACCGAAATCTGCAAGTAAAGGGGACTGGTGGCTCAGCGCTCTTTAGTG  1100
       || ||||||||||||||||| ||||||||||||||| | ||| ||  ||
seq2  TGA-CGAAATCTGCAAGTAAA-GGGACTGGTGGCTCA-CCCTCCTTTATG  1093

seq1  GCATTTATTTATTACTTACACGTTTGGAGAGAGG-ATGCT  1139
      |||||||||||| |||||||||||| |||||||| |||||
seq2  GCATTTATTTATAACTTACACGTTT-GAGAGAGGAATGCT  1132