BAC Information

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BAC

Clone NameB6Ng01-155B05
Chromosome1 (Build37)
Map Location 186,393,406 - 186,394,564
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155B05.bB6Ng01-155B05.g
ACCDH949952DH949953
length1,168450
definitionDH949952|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B05, 5' end.DH949953|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaacagtgcccaggattggctccatcaaatacatgagttttaga
gactcgagctgctgcggcaagcacttcaccagccctgttcctagtgattt
ttgaaaggcttatacagtattctgatgagaaaaattattattctaattgt
ttatcccttgcaggtaaggggcttccatcatttagcatttattttactgt
ctccagctttcaactgggagtgtgatttgtttggcttggtgtccctgcat
ttctctcttctggatttcacctggcttctgaaattagtaggctttttacc
aagttggagacactgttgattgttcttcattagagttcttttctggtctc
catctttcctctcctcagcacctgcagtgtttgcaatgcctgcagtgtct
gcctacagtgtctttagtgtctgcagtgtctgcctgcagtgtcttcaatg
tctgcagtgtatatctgcagtgcctgcagtgtctgcctgcaatgtctgca
gtgtctgtagtgtctatggtgtctacctgtagtgtcagcagtgcctgcag
tgtctgcctgcagtgtctgcattcctggtggctcactcactaactcttgt
tctagttttcaaggctaggatgcactagtcactggttttcaggttttctc
tttgttgccatttttctgtcttccatttacctggcccttgcctctgtccc
ttccccatcctgctcttcagcctagccattaagtatcttattttaattaa
ttgtattttcagtttaaattttttcatttctttttcttttgttctgagac
tttgtatttcctagttaaggctatttctataatttgtaattccagccagg
cttatatttttaacaaactatttttatgacaactgatttaaaatcttggc
taaatcatcagctgatgttagtgtctagtttttattacttaagatagagt
cttgtgctccacagccactgcattcagcccttcgacacggtcctcatgac
cttccacacctggctatgtttgtgtcaactatctttctgttttcaatttg
ggatttcctgtttcttatgtatgggtggttttcactggcaaaaaaatagc
tagctgagatacaataccatgtactcacagaatcttatccaacctgttta
actgggttctctctaaca

tggcaggatgtaaagggacggattctacgggtcattctgaagacactttt
cgatggactgtttctggaagtgtgaaagccacccagagatgtttccacaa
gtcacagcaggctggggagggagtatcagcttgtttcttaggctactacc
ccaatttagcatcaacctagtgacttaaaacttcctcactttattgtctc
accattctggatgccagacatctgaaatgagtttttcagggtgaagacat
ggtgttgacaggggtagatccttctggaagtcacaaggggagaaatgtgc
tttattatagcttcaggttgctgctggcactccgtggtttatgtccttgt
cacctcagtcctggtttctctgatgacatagacttctgttctgcatcaaa
tttcctttgggcctcctcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186393406_186394564
seq2: B6Ng01-155B05.b_65_1215

seq1  AGGATTGGCTCCATCAAATACATGAGTTTTAGAGACTCGAGCTGCTGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGGCTCCATCAAATACATGAGTTTTAGAGACTCGAGCTGCTGCGG  50

seq1  CAAGCACTTCACCAGCCCTGTTCCTAGTGATTTTTGAAAGGCTTATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTTCACCAGCCCTGTTCCTAGTGATTTTTGAAAGGCTTATACAG  100

seq1  TATTCTGATGAGAAAAATTATTATTCTAATTGTTTATCCCTTGCAGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGATGAGAAAAATTATTATTCTAATTGTTTATCCCTTGCAGGTAA  150

seq1  GGGGCTTCCATCATTTAGCATTTATTTTACTGTCTCCAGCTTTCAACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCCATCATTTAGCATTTATTTTACTGTCTCCAGCTTTCAACTGG  200

seq1  GAGTGTGATTTGTTTGGCTTGGTGTCCCTGCATTTCTCTCTTCTGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGATTTGTTTGGCTTGGTGTCCCTGCATTTCTCTCTTCTGGATTT  250

seq1  CACCTGGCTTCTGAAATTAGTAGGCTTTTTACCAAGTTGGAGACACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCTTCTGAAATTAGTAGGCTTTTTACCAAGTTGGAGACACTGTT  300

seq1  GATTGTTCTTCATTAGAGTTCTTTTCTGGTCTCCATCTTTCCTCTCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCTTCATTAGAGTTCTTTTCTGGTCTCCATCTTTCCTCTCCTCA  350

seq1  GCACCTGCAGTGTTTGCAATGCCTGCAGTGTCTGCCTACAGTGTCTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCAGTGTTTGCAATGCCTGCAGTGTCTGCCTACAGTGTCTTTAG  400

seq1  TGTCTGCAGTGTCTGCCTGCAGTGTCTTCAATGTCTGCAGTGTATATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAGTGTCTGCCTGCAGTGTCTTCAATGTCTGCAGTGTATATCTG  450

seq1  CAGTGCCTGCAGTGTCTGCCTGCAATGTCTGCAGTGTCTGTAGTGTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTGCAGTGTCTGCCTGCAATGTCTGCAGTGTCTGTAGTGTCTAT  500

seq1  GGTGTCTACCTGTAGTGTCAGCAGTGCCTGCAGTGTCTGCCTGCAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTACCTGTAGTGTCAGCAGTGCCTGCAGTGTCTGCCTGCAGTGTC  550

seq1  TGCATTCCTGGTGGCTCACTCACTAACTCTTGTTCTAGTTTTCAAGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCCTGGTGGCTCACTCACTAACTCTTGTTCTAGTTTTCAAGGCTA  600

seq1  GGATGCACTAGTCACTGGTTTTCAGGTTTTCTCTTTGTTGCCATTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCACTAGTCACTGGTTTTCAGGTTTTCTCTTTGTTGCCATTTTTCT  650

seq1  GTCTTCCATTTACCTGGCCCTTGCCTCTGTCCCTTCCCCATCCTGCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCATTTACCTGGCCCTTGCCTCTGTCCCTTCCCCATCCTGCTCTT  700

seq1  CAGCCTAGCCATTAAGTATCTTATTTTAATTAATTGTATTTTCAGTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGCCATTAAGTATCTTATTTTAATTAATTGTATTTTCAGTTTAA  750

seq1  ATTTTTTCATTTCTTTTTCTTTTGTTCTGAGACTTTGTATTTCCTAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCATTTCTTTTTCTTTTGTTCTGAGACTTTGTATTTCCTAGTTA  800

seq1  AGGCTATTTCTATAATTTGTAATTCCAGCCAGGCTTATATTTTTAACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATTTCTATAATTTGTAATTCCAGCCAGGCTTATATTTTTAACAAA  850

seq1  CTATTTTTATGACAACTGATTTAAAATCTTGGCTAAATCATCAGCTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTATGACAACTGATTTAAAATCTTGGCTAAATCATCAGCTGATG  900

seq1  TTAGTGTCTAGTTTTTATTACTTAAGATAGAGTCTTGTGCTCCACAGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTAGTGTCTAGTTTTTATTACTTAAGATAGAGTCTTGTGCTCCACAG-CC  949

seq1  ACTGCATTCAGCCCTTCGACACGGTCCTCATGACCTTCCACACCTGGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTCAGCCCTTCGACACGGTCCTCATGACCTTCCACACCTGGCTA  999

seq1  TGTTTGTGTCAACTATCTTTCTGTTTTCAATTTGGGATCTTCCTGTTTCT  1050
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTTGTGTCAACTATCTTTCTGTTTTCAATTTGGGAT-TTCCTGTTTCT  1048

seq1  TAGTGTAATGGGTGGTTTTCACTGGGAAAAAAAAATAAGGCTAGCTTGAG  1100
      || ||| |||||||||||||||||| ||||||| |    |||||| ||||
seq2  TA-TGT-ATGGGTGGTTTTCACTGGCAAAAAAATA----GCTAGC-TGAG  1091

seq1  -TACAATACCATGTA-ACTCAGGATCTTATCCAAACCTGTTTTAACTGGT  1148
       ||||||||||||||  | ||| ||||||||| |||||| ||||||||| 
seq2  ATACAATACCATGTACTCACAGAATCTTATCC-AACCTG-TTTAACTGGG  1139

seq1  TTCT-TCTAACA  1159
      |||| |||||||
seq2  TTCTCTCTAACA  1151


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