BAC Information

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BAC

Clone NameB6Ng01-155C12
Chromosome1 (Build37)
Map Location 81,939,518 - 82,051,444
singlet/doubletdoublet
Overlap genenone
Upstream gene9430031J16Rik, EG621020, LOC433328, EG665145
Downstream geneIrs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik, Tm4sf20, LOC100039491, Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524, EG665236, LOC665246, Slc19a3, LOC665196, LOC621495
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155C12.bB6Ng01-155C12.g
ACCDH950014DH950015
length2631,064
definitionDH950014|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C12, 5' end.DH950015|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,939,518 - 81,939,780)(82,050,375 - 82,051,444)
sequence
tttttggttgcatatttgtttgggatataaacaagtcctaggcctaaaat
cttttcctcaattatgaagacattgaatgttaagagaatctgtccattta
gggttctctagagaacaacagacaatagatacttggatggatagatggat
ggatggatggatggatggatggatcgatggatggatgacaagtaaagaaa
aagaaaaacaatggaaagaaaaagcaaaccaggaatacagagagagattc
tggggggttggct
gaattcagatgtcaaggtgtaatctaaaaatgtttagaacccaaggcatc
ttgaatttaccttgttttgattttggaatgtttgtaaataggcaatgaca
tataatacggttgaattccgagtgtaaaagtaaaactcattggatttcat
aaatactttttgtccatgtttgaagataattttatgcagtgtttctttta
aataagtctgaattttgtccatgacatgtcagatgaagtcagaaatagaa
tttcctacttatatataatattgttgttcaacaggcttcaatgttttaaa
ttagagatgcctacctgtatgtgaatgaatctgtgttgaggaagggattg
gtgctagaaggggaagttgttggttttaagcatatgtggctctgcagatt
taaacataattgttaatttgcaaacaaattgaggtcatgtgggaaaaatg
gcatatctgtattttcttgatttgagtttgaattctcaaaattttcaacc
tatgtatagacagaagattcagtttttcttcttctttctcttgagtctca
ttcttataaatgttactatgaaaagatggccagagagtatgggcacactg
atgaaagtgtcctgtgttctttaggtataaaccagtgaccagtttcagat
agtagatagaattgggtaattttctcagcattcactgatatatggaagtc
acctgggtttgtccctccagctttgatttacaatagtgcattcaaattag
tacaggatgaatcttatgactgtcaccaagaggtgtcttgtagccagtaa
gctagccgctggctctcacttttatggcatttcagaaagtagacttctcc
tcacatctcctgcaagtgaatcacttgatgttcttgttaaaagggcatat
ttctggctctcagtgaagtctattaagctgtgattagagagtatgccctt
tgagaaagctggccgtgcttctgatgtataccagtgctaggtgtatagag
agaaatgccagtgctttctggtgttgagatgggtcatacacaagggagat
gaataccccaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81939518_81939780
seq2: B6Ng01-155C12.b_51_313

seq1  TTTTTGGTTGCATATTTGTTTGGGATATAAACAAGTCCTAGGCCTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTGCATATTTGTTTGGGATATAAACAAGTCCTAGGCCTAAAAT  50

seq1  CTTTTCCTCAATTATGAAGACATTGAATGTTAAGAGAATCTGTCCATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTCAATTATGAAGACATTGAATGTTAAGAGAATCTGTCCATTTA  100

seq1  GGGTTCTCTAGAGAACAACAGACAATAGATACTTGGATGGATAGATGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCTAGAGAACAACAGACAATAGATACTTGGATGGATAGATGGAT  150

seq1  GGATGGATGGATGGATGGATGGATGGATGGATGGATGACAAGTAGAGAAA  200
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  GGATGGATGGATGGATGGATGGATCGATGGATGGATGACAAGTAAAGAAA  200

seq1  AAGAAAAACAATGGAAAGAAAAAGCAAACCAGGAATACAGAGAGAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACAATGGAAAGAAAAAGCAAACCAGGAATACAGAGAGAGATTC  250

seq1  TGGGGGGTTGGCT  263
      |||||||||||||
seq2  TGGGGGGTTGGCT  263

seq1: chr1_82050375_82051444
seq2: B6Ng01-155C12.g_68_1131 (reverse)

seq1  GATTTGTGGTA-TCATCTCCCCTTGTTGTATGAACCCATCTCAACCACCA  49
      |||||| |||| |||||| |||||| |||||| ||||||||||| |||||
seq2  GATTTGGGGTATTCATCT-CCCTTG-TGTATG-ACCCATCTCAA-CACCA  46

seq1  GAAAGCACTGGCATTTCTCCTCTATACACCTAGCACTGGTATACATCAGA  99
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAAGCACTGGCATTTCT-CTCTATACACCTAGCACTGGTATACATCAGA  95

seq1  AGCACGGGCAGCTTTCCTCAAAGGGCATACTCTCTAATCACAGCTTAATA  149
      ||||||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCACGGCCAGCTTT-CTCAAAGGGCATACTCTCTAATCACAGCTTAATA  144

seq1  GACCTTCACTGAGAGCCAGAAATATGCCCTTTTAACAAGAACATCAAGTG  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-CTTCACTGAGAGCCAGAAATATGCCCTTTTAACAAGAACATCAAGTG  193

seq1  ATTCACTTGCAGGAGATGTGAGGAGAAGTCTACTTTCTGAAATGCCATAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTGCAGGAGATGTGAGGAGAAGTCTACTTTCTGAAATGCCATAA  243

seq1  AAGTGAGAGCCAGCGGCTAGCTTACTGGCTACAAGACACCTCTTGGTGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAGCCAGCGGCTAGCTTACTGGCTACAAGACACCTCTTGGTGAC  293

seq1  AGTCATAAGATTCATCCTGTACTAATTTGAATGCACTATTGTAAATCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAAGATTCATCCTGTACTAATTTGAATGCACTATTGTAAATCAAA  343

seq1  GCTGGAGGGACAAACCCAGGTGACTTCCATATATCAGTGAATGCTGAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGGACAAACCCAGGTGACTTCCATATATCAGTGAATGCTGAGAA  393

seq1  AATTACCCAATTCTATCTACTATCTGAAACTGGTCACTGGTTTATACCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCCAATTCTATCTACTATCTGAAACTGGTCACTGGTTTATACCTA  443

seq1  AAGAACACAGGACACTTTCATCAGTGTGCCCATACTCTCTGGCCATCTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACAGGACACTTTCATCAGTGTGCCCATACTCTCTGGCCATCTTT  493

seq1  TCATAGTAACATTTATAAGAATGAGACTCAAGAGAAAGAAGAAGAAAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTAACATTTATAAGAATGAGACTCAAGAGAAAGAAGAAGAAAAAC  543

seq1  TGAATCTTCTGTCTATACATAGGTTGAAAATTTTGAGAATTCAAACTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTCTGTCTATACATAGGTTGAAAATTTTGAGAATTCAAACTCAA  593

seq1  ATCAAGAAAATACAGATATGCCATTTTTCCCACATGACCTCAATTTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAAATACAGATATGCCATTTTTCCCACATGACCTCAATTTGTTT  643

seq1  GCAAATTAACAATTATGTTTAAATCTGCAGAGCCACATATGCTTAAAACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTAACAATTATGTTTAAATCTGCAGAGCCACATATGCTTAAAACC  693

seq1  AACAACTTCCCCTTCTAGCACCAATCCCTTCCTCAACACAGATTCATTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTCCCCTTCTAGCACCAATCCCTTCCTCAACACAGATTCATTCA  743

seq1  CATACAGGTAGGCATCTCTAATTTAAAACATTGAAGCCTGTTGAACAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGTAGGCATCTCTAATTTAAAACATTGAAGCCTGTTGAACAACA  793

seq1  ATATTATATATAAGTAGGAAATTCTATTTCTGACTTCATCTGACATGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATATAAGTAGGAAATTCTATTTCTGACTTCATCTGACATGTCA  843

seq1  TGGACAAAATTCAGACTTATTTAAAAGAAACACTGCATAAAATTATCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAAATTCAGACTTATTTAAAAGAAACACTGCATAAAATTATCTTC  893

seq1  AAACATGGACAAAAAGTATTTATGAAATCCAATGAGTTTTACTTTTACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGACAAAAAGTATTTATGAAATCCAATGAGTTTTACTTTTACAC  943

seq1  TCGGAATTCAACCGTATTATATGTCATTGCCTATTTACAAACATTCCAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAATTCAACCGTATTATATGTCATTGCCTATTTACAAACATTCCAAA  993

seq1  ATCAAAACAAGGTAAATTCAAGATGCCTTGGGTTCTAAACATTTTTAGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACAAGGTAAATTCAAGATGCCTTGGGTTCTAAACATTTTTAGAT  1043

seq1  TACACCTTGACATCTGAATTC  1070
      |||||||||||||||||||||
seq2  TACACCTTGACATCTGAATTC  1064