BAC Information

Click to search

BAC

Clone NameB6Ng01-155D14
Chromosome1 (Build37)
Map Location 135,860,617 - 135,860,857
singlet/doubletsinglet
Overlap genenone
Upstream geneMdm4, LOC638636, Pik3c2b, Ppp1r15b, Plekha6, Golt1a, Kiss1, LOC100038824, Ren1, Etnk2, Sox13, LOC667371, Snrpe, Zc3h11a, LOC667118, Lax1, Atp2b4, Optc, Prelp, LOC100042352
Downstream geneLOC100042358, Fmod, Btg2, EG667414, Chit1, Chi3l1, Mybph, Adora1, Myog, Ppfia4, LOC100042382, Tmem183a, 4933406M09Rik, Cyb5r1, Adipor1, Klhl12, Rabif, 4931440L10Rik, Jarid1b, LOC100042418, Syt2, Ppp1r12b, Ube2t
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D14.bB6Ng01-155D14.g
ACCDH950066DH950067
length1,251223
definitionDH950066|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D14, 5' end.DH950067|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaagctgataaataacctcagaaagtatctggatataaaatt
aactcaaacaaataagtagccttcctctactcaaaggataaacaggttga
gaaagaaattagggaaaggacacccttcagaatagtcacaaataatatac
aacaccttggtgtgactctaattaagcaagtgaaagatctgtattataag
aatttcaagtctccaatgaaagaaattgaagaagatctaagaagatggaa
agatctcccatgctcatggattggcaagattaatatagtaaaaatggcca
tcttacagaaaggagtctacagtttcaatgaaatccccatcacaatccca
aatgaattgttcatagagttagaaagagcaatttgcaaattcatttgtaa
caacaaaaaacccaggataggaaaaactattcccaacaataaaagaactt
ctgggggaatctgtatccctgaccttaagctgtattacagagcaatactg
ataaaaactttatcatattggtacagagaaaggcaggaagataaatggaa
taaaattgaagacccagaaatgaactcacatacatatgttcgcttgatct
ttgacaaaggagctataaccacccagtggaaaaaagacagcattttaaac
aagtggtgctggttcaactggcagtcagcatgtagaagaatgcaaattga
accattcttatctccttgtacaaagctcaagtgcaaatggatcaaggacc
tccacataaaaccatatacactgaaacttatagatgagaaagtggggaaa
agcctcaaacaaatgggcacaggggatattttcctgaacagaacaccaat
gacttatgctctaagatcaagaatcgacaaatgggacctcataaaattac
aaagcttctgtaaggccaaggacactgtcaataggacaaaaccatctttt
cccaaccatcggattgggaagatctttaccaatcctatatccaattgttg
gctaatattcaatatatacaagactcagagttagacacctgaaaatcata
ctctataaaaatgggtacagagctaacaagatttcactgagattcatgac
gagatgcacctaagaatgttcatcacattcttgtcatcagggaggatcaa
cacccttgaattctacctctattctgttcgatggctaataaaggctcgag
acagcggatatctgggaggaatgtggaccttgatgaacctttccttccct
g
tctgtttggctctgtaccccatttttaatagtgctatttggttctctgga
gtctactttcttgagttctttgtgtattttggatgttagggcaagaatat
aggagctaaagtggtttgaaaccccacagaaagaacaaaaatatcaacca
accagacaccccaaagcttccagggatgaaaccaccaagaaagatacaca
tggcaagggcggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_135860617_135860857
seq2: B6Ng01-155D14.g_77_297

seq1  TGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATTTGTTTCTCTGGAGT  50
      ||||| ||||||||||||||||||||||| | |||||| |||||||||||
seq2  TGTTTGGCTCTGTACCCCATTTTTAATAGTGCTATTTGGTTCTCTGGAGT  50

seq1  CTAACTTCTTGAGTTCTTTGTATATATTGAATATTAGCCTTTTATCGGAT  100
      |||  |||||||||||||||| ||| ||| || ||||         | ||
seq2  CTACTTTCTTGAGTTCTTTGTGTATTTTGGATGTTAG----GGCAAGAAT  96

seq1  TTAGGATTGGTAAAGATCTTT---TCCCTATCTGTTGGTTGCCTTTTTGT  147
       |||||  | |||||   |||    ||| | | |   |            
seq2  ATAGGA--GCTAAAGTGGTTTGAAACCCCA-CAGAAAG------------  131

seq1  TTTATTGACAATGTCCTTTGCCTTATAGAAACTTTGCAATTTTACGAGG-  196
         |   | ||| ||     ||    ||| ||    |||   | | ||| 
seq2  ---AACAAAAATATC---AACCAACCAGACAC--CCCAAAGCTTCCAGGG  173

seq1  -----TCCCATTTGTCAGTTCTTTTTTTTTTTTTGGCGGGGGGGGGGGGG  241
            ||     |  ||   |     |      ||||||||||||||||
seq2  ATGAAACCACCAAGAAAG--ATACACATGGCAAGGGCGGGGGGGGGGGGG  221