BAC Information

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BAC

Clone NameB6Ng01-155M13
Chromosome1 (Build37)
Map Location 159,472,967 - 159,474,068
singlet/doubletsinglet
Overlap geneLztr2
Upstream geneAbl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585
Downstream geneLOC664935, LOC100039217, 6430517E21Rik, Astn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M13.bB6Ng01-155M13.g
ACCDH950472DH950473
length1,0911,151
definitionDH950472|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M13, 5' end.DH950473|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaattgtgagtattaaatttgcctcctctatccaatgagatt
acatagagaagtgttgcggtaataaagatacttgttacatggaggtagaa
ttagcccattagtgactttccgctggataccatgtgtttattttctacca
aagaagctgttaatatcagttctaaacctcaactttaagttgaattaaaa
aagcaaatatatgtgtgtgtgttgaagtttgcagctttagcctaccttac
tcaatggtgcttccaatttatcctgtgagagcgcctgatctttaaccagc
agtctccgccttaggctcgcaggcgagctcctgtgtgcacccgctgaagc
acagtagctaatttcttttcatcagaatacacaaatgagctgtaggttat
ccctcctccatatcacagactgaggacgccgtgaccttcgccatctctgg
tttaggatttccaaggttccccaggagtcctctccattccagaaacctga
tgggtgagacaggttaggagtgagtgtgatgcattctatgcgtcaaacct
ataggtggcactgccattcccatgccatggtccgggactcagccaagctc
acaggcagtgtggtgggaaatgtccagctttgtgcctaggaaggaaaacg
tggcctctgccacagctgttaagaagggcagtcttctttagcagggctgc
aaaaatacatttattttttctactcatatcttgagactccatctctgggg
tgaacccatttccttacttttggtataggttcttacaagtattctgtaac
ttagacggaagctaacgcaatgtcctaacggatgccggctggaggagtgg
accacacagagaacagctgcacacagtggagcctacattcccgctcgact
ttcttcattttctacatttctctgggattttctatggcttggatgcacca
atgcctacgtatgggaactagtgtttaatgggtaaagtgggcaagtctta
ttgaatgtcatgctttgcttcgcagagctttgagtgggctatgagaccac
ttgtggggacatgccttgttcctagccagtaagatgaccca
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacgggtaagaaggacacatgcaccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctatttaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattaaccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaactttgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcctgggcctagcaaac
aagaagtggatgctcacagtcagctaatggatggatcacagaccccatga
gagctagagaagtatccagagctaagggatctgtaccctatagtgacaca
tatgactacagtacctcagagctctgactctagctgcatatatatcaaga
tgctagtcgtcatcactgaaggaaggtccattggactgccacctttaatt
gccagtaccgaaacgcaaggtcaaagggatggtgggaccaggaagtgatg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159472967_159474068
seq2: B6Ng01-155M13.b_44_1134

seq1  GAATTCCCAAATTGTGAGTATTAAATTTGCCTCCTCTATCCAATGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAATTGTGAGTATTAAATTTGCCTCCTCTATCCAATGAGATT  50

seq1  ACATAGAGAAGTGTTGCGGTAATAAAGATACTTGTTACATGGAGGTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGAAGTGTTGCGGTAATAAAGATACTTGTTACATGGAGGTAGAA  100

seq1  TTAGCCCATTAGTGACTTTCCGCTGGATACCATGTGTTTATTTTCTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCATTAGTGACTTTCCGCTGGATACCATGTGTTTATTTTCTACCA  150

seq1  AAGAAGCTGTTAATATCAGTTCTAAACCTCAACTTTAAGTTGAATTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGTTAATATCAGTTCTAAACCTCAACTTTAAGTTGAATTAAAA  200

seq1  AAGCAAATATATGTGTGTGTGTTGAAGTTTGCAGCTTTAGCCTACCTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATATATGTGTGTGTGTTGAAGTTTGCAGCTTTAGCCTACCTTAC  250

seq1  TCAATGGTGCTTCCAATTTATCCTGTGAGAGCGCCTGATCTTTAACCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTGCTTCCAATTTATCCTGTGAGAGCGCCTGATCTTTAACCAGC  300

seq1  AGTCTCCGCCTTAGGCTCGCAGGCGAGCTCCTGTGTGCACCCGCTGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCGCCTTAGGCTCGCAGGCGAGCTCCTGTGTGCACCCGCTGAAGC  350

seq1  ACAGTAGCTAATTTCTTTTCATCAGAATACACAAATGAGCTGTAGGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGCTAATTTCTTTTCATCAGAATACACAAATGAGCTGTAGGTTAT  400

seq1  CCCTCCTCCATATCACAGACTGAGGACGCCGTGACCTTCGCCATCTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCCATATCACAGACTGAGGACGCCGTGACCTTCGCCATCTCTGG  450

seq1  TTTAGGATTTCCAAGGTTCCCCAGGAGTCCTCTCCATTCCAGAAACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATTTCCAAGGTTCCCCAGGAGTCCTCTCCATTCCAGAAACCTGA  500

seq1  TGGGTGAGACAGGTTAGGAGTGAGTGTGATGCATTCTATGCGTCAAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAGACAGGTTAGGAGTGAGTGTGATGCATTCTATGCGTCAAACCT  550

seq1  ATAGGTGGCACTGCCATTCCCATGCCATGGTCCGGGACTCAGCCAAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGGCACTGCCATTCCCATGCCATGGTCCGGGACTCAGCCAAGCTC  600

seq1  ACAGGCAGTGTGGTGGGAAATGTCCAGCTTTGTGCCTAGGAAGGAAAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGTGTGGTGGGAAATGTCCAGCTTTGTGCCTAGGAAGGAAAACG  650

seq1  TGGCCTCTGCCACAGCTGTTAAGAAGGGCAGTCTTCTTTAGCAGGGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCTGCCACAGCTGTTAAGAAGGGCAGTCTTCTTTAGCAGGGCTGC  700

seq1  AAAAATACATTTATTTTTTCTACTCATATCTTGAGACTCCATCTCTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACATTTATTTTTTCTACTCATATCTTGAGACTCCATCTCTGGGG  750

seq1  TGAACCCATTTCCTTACTTTTGGTATAGGTTCTTACAAGTATTCTGTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCATTTCCTTACTTTTGGTATAGGTTCTTACAAGTATTCTGTAAC  800

seq1  TTAGACGGAAGCTAACGCAATGTCCTAACGGATGCCGGCTGGAGGAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACGGAAGCTAACGCAATGTCCTAACGGATGCCGGCTGGAGGAGTGG  850

seq1  ACCACACAGAGAACAGCTGCACACAGTGGAGCCTACATTCCCGCTCGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACAGAGAACAGCTGCACACAGTGGAGCCTACATTCCCGCTCGACT  900

seq1  TTCTTCATTTTCTACATTTCTCTGGGATTTTCTATGGCTTGGGATGCACC  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCTTCATTTTCTACATTTCTCTGGGATTTTCTATGGCTT-GGATGCACC  949

seq1  AATGCCTACGTATGGGAACTAGTTGTTTTAATTGGGTAAAGTGGGCAAGG  1000
      |||||||||||||||||||||| |||||  | |||||||||||||||| |
seq2  AATGCCTACGTATGGGAACTAG-TGTTT--AATGGGTAAAGTGGGCAA-G  995

seq1  TCTTATTGAATGTCATGCTTTGCTTCGCAGGAGGCTTTGGAGTGGGCTAT  1050
      ||||||||||||||||||||||||||||||   ||||| |||||||||||
seq2  TCTTATTGAATGTCATGCTTTGCTTCGCAG--AGCTTT-GAGTGGGCTAT  1042

seq1  GAAGAACCACTTGTGGGGACATGCCTTGTTCCTAGCCAGTAAGATGGACC  1100
      ||   |||||||||||||||||||||||||||||||||||||||| ||||
seq2  GA--GACCACTTGTGGGGACATGCCTTGTTCCTAGCCAGTAAGAT-GACC  1089

seq1  CA  1102
      ||
seq2  CA  1091