BAC Information

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BAC

Clone NameB6Ng01-156B12
Chromosome1 (Build37)
Map Location 72,180,378 - 72,271,926
singlet/doubletdoublet
Overlap geneMreg
Upstream geneLOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255
Downstream genePecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156B12.bB6Ng01-156B12.g
ACCDH950690DH950691
length1,1541,071
definitionDH950690|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B12, 5' end.DH950691|Mus musculus domesticus DNA, BAC clone: B6Ng01-156B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,180,378 - 72,181,552)(72,270,839 - 72,271,926)
sequence
gaattccaagtattcaaacaaaacgcttggatatccacatgaaaatacat
acacaaattgtcttagtttctttccctgaccaaagcaacttaaggaagga
agtttattctgactcacagtctaagcataaacagtccatcattcggggaa
ctgaaagcagagaatttgaagtagctgaccatgtcccattctccacatca
ggacgcagagagtggtggatatatgctgctgcttcctgcctttctccatt
ctttacactccaggattccagccagggaatgacacaccacctcaactgac
aaattcaagacaacactccacaggcacacccagagggccactgttctctt
gctgtgaaaaggcaccaggtccaagccaactcttacaaaagaaagcattt
agttagaggcttgcttacagagagggttaggtccattatcatcatggtgc
tggagaaagagctgagggctttacaccctgatccacaggcagcaagccca
cccccagtgacacacctacctaatccttcccaacagctcattaaccgggg
gccaatcatgtaaatatatgtgcctgtggggggcattctcattcaagcca
ccatacccttctaattctacattttgtcaagtagacaggtagcacaatgc
ccataatagatttgttgataatcatcaaaaatagcaataacatgtttgtg
ggagtggatgtctgggacttgcaaaaactcttaggttaaagctctaaccc
cctgtggtggcttgaatggaaaacgttccctgtagcttcttgtgtctgaa
tacttggtcctaggtttggtggtgctgtgtgaggaggttgtggaaccttg
ctagaggaattgcattactgggtgggagagggcagggcttagtttatagc
cttgcctcactttcagttcacttttagtttctgttggtggttgggtttct
cagttcctgatccagcactggcttgcttccctggcttgctcagctgcttt
gtataaaccaggactagcagccagggagcaccacctacatagtcccacca
ctcttgttcactaattgagagaatgcttacagctggtctcatgcagcatt
ctcagagctctttctctgtgataacttccaagcatgtgtcaagtggcaca
taaa
tatgcagaccaagctggccacgaactctgagatcctcctgcctcccgcct
gcctctctgcctctctgcctctctgcctctctgcctctctgcctctctgc
ctctctgcctctctgcctctctgcctctctgcctctctccctcctgactc
ttggcctctgcccgacaatgggagggtttttagcaaaaccgttaaatcgt
tggtcaagggctggagagatggctcagcggttaagagcactggctgctct
tccagaagcctttagctcaattcccagcaaccacacaggggctcacagct
atctgtaatgggatcagatgccctcttctggagtgtctgaagacagcttc
agtgtactcatataggtaaaatgaataattttgttgttgttgttgttgtt
gttcaaagtcagctacggtcaattttctgggtggatgactttagataaat
tactttttccttacttcccataagtaactatagtcctcaactatgtacta
aaaaaagattgaatattcggagttgctagatctaagcatggcgtgcagat
ttcttccgaccatcccttcacttgccctcacgcctgagcgcccagctcct
gcagcctgtcactcagactccctaggttgcagtcgtaacacatttttcta
gggtcttgactttagaccagaggttctctgcgtggctggggaaagcaggt
agaaagacaggctggtaacggagctgggaagcttgttcaacagcagtgcc
tggacacttcatgcacggaaaagctgggccctgctcttgggagtgacttc
ccctcctcttttccagtgctccttatatacaatccttggaagtaaggggt
tgggaaggcgtgggatcaatgacacagattctgggagccagatgaaaagc
agagccagacttgtttactgttctaatgagacactttttttccctctgcc
acgtcccctggtcagtaactgctgtcttgcactggcacagctccttgctc
agtcacttgctctgtctgtctgtctctggtttcagcagattcagttagta
catttgagctctgctaagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72180378_72181552
seq2: B6Ng01-156B12.b_48_1201

seq1  GAATTCCAAGTATTCAAACAAAACGCTTGGATATCCACATGAAAATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTATTCAAACAAAACGCTTGGATATCCACATGAAAATACAT  50

seq1  ACACAAATTGTCTTAGTTTCTTTCCCTGACCAAAGCAACTTAAGGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTGTCTTAGTTTCTTTCCCTGACCAAAGCAACTTAAGGAAGGA  100

seq1  AGTTTATTCTGACTCACAGTCTAAGCATAAACAGTCCATCATTCGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTCTGACTCACAGTCTAAGCATAAACAGTCCATCATTCGGGGAA  150

seq1  CTGAAAGCAGAGAATTTGAAGTAGCTGACCATGTCCCATTCTCCACATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCAGAGAATTTGAAGTAGCTGACCATGTCCCATTCTCCACATCA  200

seq1  GGACGCAGAGAGTGGTGGATATATGCTGCTGCTTCCTGCCTTTCTCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCAGAGAGTGGTGGATATATGCTGCTGCTTCCTGCCTTTCTCCATT  250

seq1  CTTTACACTCCAGGATTCCAGCCAGGGAATGACACACCACCTCAACTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACTCCAGGATTCCAGCCAGGGAATGACACACCACCTCAACTGAC  300

seq1  AAATTCAAGACAACACTCCACAGGCACACCCAGAGGGCCACTGTTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGACAACACTCCACAGGCACACCCAGAGGGCCACTGTTCTCTT  350

seq1  GCTGTGAAAAGGCACCAGGTCCAAGCCAACTCTTACAAAAGAAAGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAAAGGCACCAGGTCCAAGCCAACTCTTACAAAAGAAAGCATTT  400

seq1  AGTTAGAGGCTTGCTTACAGAGAGGGTTAGGTCCATTATCATCATGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAGGCTTGCTTACAGAGAGGGTTAGGTCCATTATCATCATGGTGC  450

seq1  TGGAGAAAGAGCTGAGGGCTTTACACCCTGATCCACAGGCAGCAAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGAGCTGAGGGCTTTACACCCTGATCCACAGGCAGCAAGCCCA  500

seq1  CCCCCAGTGACACACCTACCTAATCCTTCCCAACAGCTCATTAACCGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGTGACACACCTACCTAATCCTTCCCAACAGCTCATTAACCGGGG  550

seq1  GCCAATCATGTAAATATATGTGCCTGTGGGGGGCATTCTCATTCAAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCATGTAAATATATGTGCCTGTGGGGGGCATTCTCATTCAAGCCA  600

seq1  CCATACCCTTCTAATTCTACATTTTGTCAAGTAGACAGGTAGCACAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCCTTCTAATTCTACATTTTGTCAAGTAGACAGGTAGCACAATGC  650

seq1  CCATAATAGATTTGTTGATAATCATCAAAAATAGCAATAACATGTTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATAGATTTGTTGATAATCATCAAAAATAGCAATAACATGTTTGTG  700

seq1  GGAGTGGATGTCTGGGACTTGCAAAAACTCTTAGGTTAAAGCTCTAACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGATGTCTGGGACTTGCAAAAACTCTTAGGTTAAAGCTCTAACCC  750

seq1  CCTGTGGTGGCTTGAATGGAAAACGTTCCCTGTAGCTTCTTGTGTCTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTGGCTTGAATGGAAAACGTTCCCTGTAGCTTCTTGTGTCTGAA  800

seq1  TACTTGGTCCTAGGTTTGGTGGTGCTGTGTGAGGAGGTTGTGGAACCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTCCTAGGTTTGGTGGTGCTGTGTGAGGAGGTTGTGGAACCTTG  850

seq1  CTAGAGGAATTGCATTACTGGGTGGGAGAGGGCAGGGCTTAGTTTATAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGAATTGCATTACTGGGTGGGAGAGGGCAGGGCTTAGTTTATAGC  900

seq1  CTTGCCTCACTTTCAGTTCACTTTTAGTTTCCTGTTGGTGGTT-GGTTTC  949
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CTTGCCTCACTTTCAGTTCACTTTTAGTTT-CTGTTGGTGGTTGGGTTTC  949

seq1  TCAGGTTCCTGATCCAGCCACTGGCTTGCTTCCCCTGGCTTGCTCAGCTT  999
      ||| ||||||||||||| ||||||||||||| |||||||||||||||| |
seq2  TCA-GTTCCTGATCCAG-CACTGGCTTGCTT-CCCTGGCTTGCTCAGC-T  995

seq1  GCTTTTGTATAAAACCCAGGACTAGCAGCCCAGGGAAGGCACCACCCACC  1049
      || ||||||||||  ||||||||||||| |||||||  |||||||| | |
seq2  GC-TTTGTATAAA--CCAGGACTAGCAG-CCAGGGA--GCACCACCTA-C  1038

seq1  ATAGGCCCACCCACCCTTGGTCACTAATTGAGAGAATGCCTTACAGCTGG  1099
      |||| |||| |||| |||| |||||||||||||||||| ||||||||| |
seq2  ATAGTCCCA-CCACTCTTGTTCACTAATTGAGAGAATG-CTTACAGCT-G  1085

seq1  GTCTCATGCAGGCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACT-  1148
      |||||||||| |||||  ||||   || ||| ||||||||||||||||| 
seq2  GTCTCATGCA-GCATT--CTCA---GA-GCT-CTTTCTCTGTGATAACTT  1127

seq1  -CCAGCTTGTGTCAAGTTGGCACATAAA  1175
       | ||| ||||||||| |||||||||||
seq2  CCAAGCATGTGTCAAG-TGGCACATAAA  1154

seq1: chr1_72270839_72271926
seq2: B6Ng01-156B12.g_77_1147 (reverse)

seq1  TTACTTAAGCAGGAGCTTCCAAATGTACTAACCCTGGAATCTGCCTGAAA  50
      |||||| |||| |||||  |||||||||||||    ||||||| ||||||
seq2  TTACTT-AGCA-GAGCT--CAAATGTACTAAC---TGAATCTG-CTGAAA  42

seq1  CCCAGAGACAGACAAGGACAGAGCAAGTGACTGGAGCCAAGGGGCTGGTG  100
       |||||||||||||  |||||||||||||||| ||| ||||| ||| |||
seq2  -CCAGAGACAGACA--GACAGAGCAAGTGACT-GAG-CAAGGAGCT-GTG  86

seq1  CCAGGTGCAAGACAAGCAGTTACTGACCAAGGGGACGTGGGCAGAGGGAA  150
      ||| ||||||||| |||||||||||||| ||||||||| |||||||||||
seq2  CCA-GTGCAAGAC-AGCAGTTACTGACC-AGGGGACGT-GGCAGAGGGAA  132

seq1  AAAAAGTGTCTTCATTAGAACAGTAAACAAGTCTGGCTCTGCTTTTCATC  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGTC-TCATTAGAACAGTAAACAAGTCTGGCTCTGCTTTTCATC  181

seq1  TGGCTCCCAGAATCTGTGTCATTGATCCCACGCCTT-CCAACCCCTTACT  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGCTCCCAGAATCTGTGTCATTGATCCCACGCCTTCCCAACCCCTTACT  231

seq1  TCCAAGGATTGTATATAAGGAGCACTGGAAAAGAGGAGGGGAAGTCACTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGATTGTATATAAGGAGCACTGGAAAAGAGGAGGGGAAGTCACTC  281

seq1  CCAAGAGCAGGGCCCAGCTTTTCCGTGCATGAAGTGTCCAGGCACTGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGCAGGGCCCAGCTTTTCCGTGCATGAAGTGTCCAGGCACTGCTG  331

seq1  TTGAACAAGCTTCCCAGCTCCGTTACCAGCCTGTCTTTCTACCTGCTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAAGCTTCCCAGCTCCGTTACCAGCCTGTCTTTCTACCTGCTTTC  381

seq1  CCCAGCCACGCAGAGAACCTCTGGTCTAAAGTCAAGACCCTAG-AAAATG  448
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCAGCCACGCAGAGAACCTCTGGTCTAAAGTCAAGACCCTAGAAAAATG  431

seq1  TGTTACGACTGCAACCTAGGGAGTCTGAGTGACAGGCTGCAGGAGCTGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACGACTGCAACCTAGGGAGTCTGAGTGACAGGCTGCAGGAGCTGGG  481

seq1  CGCTCAGGCGTGAGGGCAAGTGAAGGGATGGTCGGAAGAAATCTGCACGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAGGCGTGAGGGCAAGTGAAGGGATGGTCGGAAGAAATCTGCACGC  531

seq1  CATGCTTAGATCTAGCAACTCCGAATATTCAATCTTTTTTTAGTACATAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTAGATCTAGCAACTCCGAATATTCAATCTTTTTTTAGTACATAG  581

seq1  TTGAGGACTATAGTTACTTATGGGAAGTAAGGAAAAAGTAATTTATCTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACTATAGTTACTTATGGGAAGTAAGGAAAAAGTAATTTATCTAA  631

seq1  AGTCATCCACCCAGAAAATTGACCGTAGCTGACTTTGAACAACAACAACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCCACCCAGAAAATTGACCGTAGCTGACTTTGAACAACAACAACA  681

seq1  ACAACAACAAAATTATTCATTTTACCTATATGAGTACACTGAAGCTGTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAAAATTATTCATTTTACCTATATGAGTACACTGAAGCTGTCT  731

seq1  TCAGACACTCCAGAAGAGGGCATCTGATCCCATTACAGATAGCTGTGAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACTCCAGAAGAGGGCATCTGATCCCATTACAGATAGCTGTGAGC  781

seq1  CCCTGTGTGGTTGCTGGGAATTGAGCTAAAGGCTTCTGGAAGAGCAGCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTGGTTGCTGGGAATTGAGCTAAAGGCTTCTGGAAGAGCAGCCA  831

seq1  GTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTTGACCAACGATTTAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTTGACCAACGATTTAAC  881

seq1  GGTTTTGCTAAAAACCCTCCCATTGTCGGGCAGAGGCCAAGAGTCAGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTAAAAACCCTCCCATTGTCGGGCAGAGGCCAAGAGTCAGGAG  931

seq1  GGAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGC  981

seq1  AGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGGCGGGAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGGCGGGAGG  1031

seq1  CAGGAGGATCTCAGAGTTCGTGGCCAGCTTGGTCTGCATA  1088
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGATCTCAGAGTTCGTGGCCAGCTTGGTCTGCATA  1071