BAC Information

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BAC

Clone NameB6Ng01-156E02
Chromosome1 (Build37)
Map Location 7,240,353 - 7,241,528
singlet/doubletsinglet
Overlap genenone
Upstream geneRb1cc1, EG620393, LOC100039302, LOC664946, St18, LOC665015, LOC665027, LOC100039347, LOC435608, Pcmtd1, LOC545302
Downstream geneLOC665063, LOC665069, LOC100039408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156E02.bB6Ng01-156E02.g
ACCDH950807DH950808
length1,2441,158
definitionDH950807|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E02, 5' end.DH950808|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaaatctacaatgagaggaaccagcagctccttagaatctttt
acacacacacacacacacacacacacacacacacacacacacattaagaa
tgtagttttctggaaagaaaacagaaattttgctgaggttagtgttcaca
aatacgagtgaacctagttcttcctttttcttccttttagtcatatttga
tacttttgtacataacttcagcaataactaaattgcatgcctaaagtaaa
atgtcctgaggatttcatgctgttgtggagttttgctctgcttgttgcct
tcccatcccccttagaaaaattgcatgaaaactctaagggggcatcctcc
agtccctcaaagggcagtctcactggcacttacaataatagtgcttgaac
tttttcaagcattactgctggagcagattaatgattcaatcaccaccctt
ggaaagcgtttagaaatgtggatcgttagcaatgaaaacacacttagaaa
gcatttggaaaattagattgttagtgaagctaagttaagatagttttgtt
agtggcctcatggagaaaatcttagggagcattttgaagttcagaaaggc
atattcttagtagttgagctaggaattgtttaaggttggggaataagaac
aatggcatcccaactagcaatagctgcatttctcgctaaagcaagatcaa
ggtgatattaatttcttgtacccatttttggactcagcttcctgatatga
tttaataaaaaattgttaatgagtagatgtgcacgttgagaatttaagaa
gaaattactgattgtttctttatataaaagtttagatttctgattctttt
aagatctttattcgattactttttatgattaccttttaagatcataaata
ttgatcaataaaatatttgatcatatctgcaaatattccctgccaataag
aaaaacctggctgtgaaaattatctgcttgctcacacttagttagcttat
agcaaggtgcttagtatgatatatgtgcattctggaaatatttgttttgt
tttgtctgttatctgactttgaaaggttttaatgaaagtattaagtattc
atgattaataacttcctaaagaaatggaatagttgcattgtaattcatac
tgctgagaaagattctcaggaatgtaattgcggagaaaatatgttgtgag
tattgtctactccacgagacgtgtgattgttatatatcgacagt
gaattcacataggaaactctagagccagattcaaggctggaatgaaactt
catgcctcatcagcatctactttgaatatggaaataagagttaaaagatt
caccagtctcctgccaactacactgccagctatctgtggtctgctgcagt
cctaaatcactgaaaatgttagatatcaagatatatattttaatttgcag
gcaagtctgaacaggctagactgttcaatatagctgcaccacaacagaat
ttcttgtgatttagtcactgttatctcagtttttatccaggtgacttctg
cagcatttcaaagattatatgcaaggaaccactaaatagcagtcttatgc
caatcctgtccagctcatcacatagacattgcatgctgggaagaaaacaa
catgagaaaacattttgagaaagttgaagaacagattcaaaataaaacaa
ttaatcaagatcacataattgttctgattatcattgtttttatcccttac
tgtgcctaacttacaaatttaatgttatcccatataagaaagaacaaagg
atatagaattcagtgactttacgaatatgctggctgtctggatctccatc
agtgaagggaccactgtacttttgtcatggttgccaggtgtcaagagaat
atatttaaatggctcatcataatgtcagagacactttgaacaatcaaaca
ctagctgctgtttgttttcagatgaatgaatttgcattatagattttgtt
acctaatcccttttcatctaagctactatattacattctcttcatagaag
ctgcattttttctttgaaattttagagtatcgtgtttttgtaagattata
agttgacataggtgtttttcatattccaggagattaaaccaggactccct
ttaatacccatactttctgtgcttcagtcataaaatgctgcagtttgcat
gtaacctggacatagcctcatactctctaatgatttctagtggcttaatg
tacatgaatgtgtagtaaatgaggccagatggttgaaggtgtccttgcct
gagacaagactggcaagctagatggattcctgaccgactagggggatgga
agcaaagagttcctgcattgtcctcggcttctccaagagtgcgaaagaac
tgttaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_7240353_7241528
seq2: B6Ng01-156E02.g_64_1221

seq1  GAATTCACATAGGAAACTCTAGAGCCAGATTCAAGGCTGGAATGAAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAGGAAACTCTAGAGCCAGATTCAAGGCTGGAATGAAACTT  50

seq1  CATGCCTCATCAGCATCTACTTTGAATATGGAAATAAGAGTTAAAAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTCATCAGCATCTACTTTGAATATGGAAATAAGAGTTAAAAGATT  100

seq1  CACCAGTCTCCTGCCAACTACACTGCCAGCTATCTGTGGTCTGCTGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCTCCTGCCAACTACACTGCCAGCTATCTGTGGTCTGCTGCAGT  150

seq1  CCTAAATCACTGAAAATGTTAGATATCAAGATATATATTTTAATTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATCACTGAAAATGTTAGATATCAAGATATATATTTTAATTTGCAG  200

seq1  GCAAGTCTGAACAGGCTAGACTGTTCAATATAGCTGCACCACAACAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTGAACAGGCTAGACTGTTCAATATAGCTGCACCACAACAGAAT  250

seq1  TTCTTGTGATTTAGTCACTGTTATCTCAGTTTTTATCCAGGTGACTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGATTTAGTCACTGTTATCTCAGTTTTTATCCAGGTGACTTCTG  300

seq1  CAGCATTTCAAAGATTATATGCAAGGAACCACTAAATAGCAGTCTTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTCAAAGATTATATGCAAGGAACCACTAAATAGCAGTCTTATGC  350

seq1  CAATCCTGTCCAGCTCATCACATAGACATTGCATGCTGGGAAGAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGTCCAGCTCATCACATAGACATTGCATGCTGGGAAGAAAACAA  400

seq1  CATGAGAAAACATTTTGAGAAAGTTGAAGAACAGATTCAAAATAAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAAACATTTTGAGAAAGTTGAAGAACAGATTCAAAATAAAACAA  450

seq1  TTAATCAAGATCACATAATTGTTCTAATTATCATTGTTTTTATCCCTTAC  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAATCAAGATCACATAATTGTTCTGATTATCATTGTTTTTATCCCTTAC  500

seq1  TGTGCCTAACTTACAAATTTAATGTTATCCCATATAAGAAAGAACAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTAACTTACAAATTTAATGTTATCCCATATAAGAAAGAACAAAGG  550

seq1  ATATAGAATTCAGTGACTTTACGAATATGCTGGCTGTCTGGATCTCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATTCAGTGACTTTACGAATATGCTGGCTGTCTGGATCTCCATC  600

seq1  AGTGAAGGGACCACTGTACTTTTGTCATGGTTGCCAGGTGTCAAGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGGACCACTGTACTTTTGTCATGGTTGCCAGGTGTCAAGAGAAT  650

seq1  ATATTTAAATGGCTCATCATAATGTCAGAGACACTTTGAACAATCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAATGGCTCATCATAATGTCAGAGACACTTTGAACAATCAAACA  700

seq1  CTAGCTGCTGTTTGTTTTCAGATGAATGAATTTGCATTATAGATTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCTGTTTGTTTTCAGATGAATGAATTTGCATTATAGATTTTGTT  750

seq1  ACCTAATCCCTTTTCATCTAAGCTACTATATTACATTCTCTTCATAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATCCCTTTTCATCTAAGCTACTATATTACATTCTCTTCATAGAAG  800

seq1  CTGCATTTTTTCTTTGAAATTTTAGAGTATCGTGTTTTTGTAAGATTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTTTTCTTTGAAATTTTAGAGTATCGTGTTTTTGTAAGATTATA  850

seq1  AGTTGACATAGGTGTTTTTCATTATTCCAGGGAGATTAAACCAGGACTCC  900
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  AGTTGACATAGGTGTTTTTCA-TATTCCA-GGAGATTAAACCAGGACTCC  898

seq1  CTTTAAATACCCATACTTTCTGTGCTCCAGTCATAAAATGCTGCAGTTTG  950
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTT-AATACCCATACTTTCTGTGCTTCAGTCATAAAATGCTGCAGTTTG  947

seq1  CATGTAACCTGGACATAGCCTCCATACTCTCTAAATGATTTCTAGGTGGC  1000
      ||||||||||||||||||||| |||||||||| ||||||||||| |||||
seq2  CATGTAACCTGGACATAGCCT-CATACTCTCT-AATGATTTCTA-GTGGC  994

seq1  TTAATGTACATGAATGTGTAAGTAAAAATGAGGGCAAGATGGTTGAGGTG  1050
      ||||||||||||||||||| |||  |||||| ||| |||||||||| |  
seq2  TTAATGTACATGAATGTGT-AGT--AAATGA-GGCCAGATGGTTGAAGGT  1040

seq1  GCCCTTGCCTGAGGACAAGACTGGCAACCTAGGATGGATTCCAGACCCAC  1100
      | |||||||||| |||||||||||||| ||| |||||||||| |||| ||
seq2  GTCCTTGCCTGA-GACAAGACTGGCAAGCTA-GATGGATTCCTGACCGAC  1088

seq1  TAGGGGGAAGGAGAGAAAGAGTCCCTGCAAATTGTCCTCAGCCCTCCACA  1150
      |||||||| |||   ||||||| |||||  ||||||||| | | ||  ||
seq2  TAGGGGGATGGAAGCAAAGAGTTCCTGC--ATTGTCCTC-GGCTTCTCCA  1135

seq1  AGAGTGCCAGAGAACACCTGTTAACA  1176
      ||||||| | ||||   |||||||||
seq2  AGAGTGCGAAAGAA---CTGTTAACA  1158