BAC Information

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BAC

Clone NameB6Ng01-157K13
Chromosome1 (Build37)
Map Location 61,720,736 - 61,721,252
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K13.bB6Ng01-157K13.g
ACCDH951832DH951833
length1,117932
definitionDH951832|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K13, 5' end.DH951833|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctagggcaaacca
atagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactcttgccctacctattcaacattg
tacttgaagtcctggccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaagcc
tgataaacagtttcaatgaagtagctggatataaaattaactcaaacaag
tcaatgccctttctgtacacaaaggataaacaggctgagaaagaaattag
tgaaacaacacccttctcaatagtcacaaataatataaaataccttggcg
tgactctaaataaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattacaactcaattcttc
aatgaattagaaagggcaataggcagattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgccggacctaaaactgtactacagagcaattgtgatcaaaactgca
tggtactggtatagtgacagacaagtagaccaatggaacagaattgaaga
cccagagatgaatccacacacttatggtcacttgatctttgacaagggag
ctaaaccatccagtggaaaaagacagcattttcaacaaatggtgctggca
caactggcggttatcatgtagaaggatgcgaactgatccatttctatctt
cttgtactaaggacatgaatccggatgataagtgcagttctcaaagcaac
tttggcgaaattaaaatgggctatggtttctaagtatgtttggttgtggg
ggggctggtgagatgac
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatacaatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtatcttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtccctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720736_61721252
seq2: B6Ng01-157K13.g_68_584 (reverse)

seq1  AGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAAC  50

seq1  CAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCT  100

seq1  TCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAA  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAA  150

seq1  GTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGAT  200
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGATACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGAT  200

seq1  ACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTT  250
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCTAAACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTT  250

seq1  CTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGA  300
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTTGCTAACCGA  300

seq1  ATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTAT  350

seq1  TCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCC  400

seq1  ATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGAT  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGAT  450

seq1  GCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTT  500

seq1  GGAAAGATCAGGAATTC  517
      |||||||||||||||||
seq2  GGAAAGATCAGGAATTC  517