BAC Information

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BAC

Clone NameB6Ng01-157P06
Chromosome1 (Build37)
Map Location 101,485,999 - 101,487,223
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666182
Downstream geneC230078M14Rik, LOC633295, EG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157P06.bB6Ng01-157P06.g
ACCDH952042DH952043
length1,209926
definitionDH952042|Mus musculus domesticus DNA, BAC clone: B6Ng01-157P06, 5' end.DH952043|Mus musculus domesticus DNA, BAC clone: B6Ng01-157P06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgaagaagcatggtaggctcctgtaacaggagaagcatatg
ctgtagaattaagcagttgatccataggaagattggaatgaaacaattct
tccatattgctaaatacagctgaatggacttgagcttactgaactagaac
agggaaagagaaacaaatttgagtgaaatgtgctttttctgtattctgct
atactctttttaaaatgcatattaattattttaattaatagtgtcctggc
aaattttatatcaacctgacatgaactatactagtttgagaagaaaactc
acatgtaggtaacgctgtgtcatgagaaggcacagcccattattgtggtg
ctgttccctctcccttatgccagcacttgtggtaataagatgctatatgt
aagcaggatgagcaagttaaaaggaccatgcaggtaaaaatcaatcagtc
ccttcctgtatatttgtccttgcctccagatttttatcccatttgagtta
ctgtcctaagagcttttgataatgaacatatagaaatatgaatgaaataa
agcattttctccccaaggtgcttatatttatagtgtttcatcaaaccaaa
agtaatcccatataagttagttttatttttataacatgtttgtgatgtat
gtatgtttatatgctcatttatatgttaaaacattttctctattgcttac
cacattatttataaaatcattacatttattatttatttgtatatgtatgt
gactgtgagcatgacttgtgtgtcaaatcaaaggtcacttgctggaattg
gttgtctcagtccacaattttaggcccctgtcatcaaagttgtgagagac
caaactgtgggaaactaggtaccgcagttactctcaccctaaagttctgg
ctgaccctttgagggaattatgtcacttccttcttcattgcctccacctg
gtgcttgagactgccagcttcactccttcttcacttggtgcctagaactg
cttagattaagcagttcacctcctccttcatgtctttcgttggatcttgg
gaactgtttaatgaaagacttaacagaccttgacaactcttgcttgcctt
gcttacagtctggcttcctgaaccacagaaataactaaggtcctgctgac
gcactaagtgaggtgctaggcttgaacacagtaactctatgctaagcact
cctcaccag

gaattctagaaagtcattaatttgtttctttatttcttccctgaccaagc
tacgatgagtagagaatttgttcagtttttatgaatatgtgggctttctc
tttttgttgttgttgctgttgttgttgttgttgttgttgttgttgctgtt
gttgaagtccaacaaaacactgtgctaatctgatagaatgcataggattt
aggattatttcagttttcttgtaccagttgagacttgtttcatgtccaat
tatatggcaaattttggagaaagttccatgaggtgctgagaaggtatagt
catttgttttgtcagaaaatgttctttagttctctgttacatccatttgg
tttataatttctgttagtttcaatgtgtctctgtttagtttctgtttcaa
tgatatgtacactggttagagtatagttttgaagtaccccactattagta
tgtgagtttcatgtgtgttttgatctttagtagcttcttttacaaatgtg
ggtatccttcatttggggcatatatgttcagaattgaaacttaatattga
tggatttttttccttcgatgagtataatgtgtccttccccatatcttttg
attaattttttaaaagactatttaattgggagttgtaatggtgactccag
ctcttttcctaggaacattttcctttgaaaaacaaaaaacaaacaaacaa
acaaacaaaaaacccaagccctttatttttgagaaagtgtttgtttttgt
tgctaaagtatgtttcttatttgcagcataatgatggatcctctgagtat
ccattctgttagcctgtgcctttttattcagaaactgagtctgttggttt
tgagagatattcaaagaccaatgattgttatttcctgttatttttgctgt
cagagttggtagtgttgtgtgtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101485999_101487223
seq2: B6Ng01-157P06.b_50_1258 (reverse)

seq1  CTGGTGA-GAGTGCTTAGCATATGAAGATACTTGTTGTTC-AGCCTAACA  48
      ||||||| ||||||||||||||   || ||||   ||||| |||||| | 
seq2  CTGGTGAGGAGTGCTTAGCATA--GAGTTACT--GTGTTCAAGCCTAGC-  45

seq1  ACCTCACTTTGTGTCCCGTCCAGCAGGACC-TAGTTA-TTCTGTGGGTCA  96
      ||||||||| |||   ||| |||||||||| |||||| |||||||| || 
seq2  ACCTCACTTAGTG---CGT-CAGCAGGACCTTAGTTATTTCTGTGGTTC-  90

seq1  AGGAAGGCCAGGACCTGAAAGCAAGGCCAAGCAAAGAGTTGTCAAGGTCT  146
      ||||| |||||   ||| |||||||| ||||| |||||||||||||||||
seq2  AGGAA-GCCAG--ACTGTAAGCAAGG-CAAGC-AAGAGTTGTCAAGGTCT  135

seq1  GTTTAATGCCTTCATTAAACAG-TCCCAGGAACCAAACGAAGACATGGAG  195
      | ||||  | |||||||||||| ||||| || ||||   |||||||| ||
seq2  G-TTAAGTCTTTCATTAAACAGTTCCCAAGATCCAACGAAAGACATGAAG  184

seq1  GAGGAGGTGAACCTGCCTTAATCTAAGCAGTTCTAGGCACCAAGTGAAGG  245
      ||||||||||| ||| |||||||||||||||||||||||||||||||| |
seq2  GAGGAGGTGAA-CTG-CTTAATCTAAGCAGTTCTAGGCACCAAGTGAA-G  231

seq1  AGGGAGTGAAGCTGGCAGTCTCAAGCACCAGGTGGAGGCAATGAAGGAGG  295
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGAGTGAAGCTGGCAGTCTCAAGCACCAGGTGGAGGCAATGAAGAAGG  281

seq1  GAGTGACATAATTCCCTTCAAAGGGTCAGCCAGAACTTTAGGGTGAGAGT  345
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGTGACATAATTCCC-TCAAAGGGTCAGCCAGAACTTTAGGGTGAGAGT  330

seq1  AACTGCGGTACCTAGTTTCCCACAGTTTGGTCTCTCACAACTTTGATGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCGGTACCTAGTTTCCCACAGTTTGGTCTCTCACAACTTTGATGAC  380

seq1  AGGGGCCTAAAATTGTGGACTGAGACAACCAATTCCAGCAAGTTGACCTT  445
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGGGCCTAAAATTGTGGACTGAGACAACCAATTCCAGCAAG-TGACCTT  429

seq1  TGATTTGACACACAAGTCATGCTCACAGTCACATACATATACAAATAAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGACACACAAGTCATGCTCACAGTCACATACATATACAAATAAAT  479

seq1  AATAAATGTAATGATTTTATAAATAATGTGGTAAGCAATAGAGAAAATGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTAATGATTTTATAAATAATGTGGTAAGCAATAGAGAAAATGT  529

seq1  TTTAACATATAAATGAGCATATAAACATACATACATCACAAACATGTTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATATAAATGAGCATATAAACATACATACATCACAAACATGTTAT  579

seq1  AAAAATAAAACTAACTTATATGGGATTACTTTTGGTTTGATGAAACACTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAACTAACTTATATGGGATTACTTTTGGTTTGATGAAACACTA  629

seq1  TAAATATAAGCACCTTGGGGAGAAAATGCTTTATTTCATTCATATTTCTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAGCACCTTGGGGAGAAAATGCTTTATTTCATTCATATTTCTA  679

seq1  TATGTTCATTATCAAAAGCTCTTAGGACAGTAACTCAAATGGGATAAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCATTATCAAAAGCTCTTAGGACAGTAACTCAAATGGGATAAAAA  729

seq1  TCTGGAGGCAAGGACAAATATACAGGAAGGGACTGATTGATTTTTACCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGCAAGGACAAATATACAGGAAGGGACTGATTGATTTTTACCTG  779

seq1  CATGGTCCTTTTAACTTGCTCATCCTGCTTACATATAGCATCTTATTACC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCTTTTAACTTGCTCATCCTGCTTACATATAGCATCTTATTACC  829

seq1  ACAAGTGCTGGCATAAGGGAGAGGGAACAGCACCACAATAATGGGCTGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGCTGGCATAAGGGAGAGGGAACAGCACCACAATAATGGGCTGTG  879

seq1  CCTTCTCATGACACAGCGTTACCTACATGTGAGTTTTCTTCTCAAACTAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCATGACACAGCGTTACCTACATGTGAGTTTTCTTCTCAAACTAG  929

seq1  TATAGTTCATGTCAGGTTGATATAAAATTTGCCAGGACACTATTAATTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCATGTCAGGTTGATATAAAATTTGCCAGGACACTATTAATTAA  979

seq1  AATAATTAATATGCATTTTAAAAAGAGTATAGCAGAATACAGAAAAAGCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAATATGCATTTTAAAAAGAGTATAGCAGAATACAGAAAAAGCA  1029

seq1  CATTTCACTCAAATTTGTTTCTCTTTCCCTGTTCTAGTTCAGTAAGCTCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCACTCAAATTTGTTTCTCTTTCCCTGTTCTAGTTCAGTAAGCTCA  1079

seq1  AGTCCATTCAGCTGTATTTAGCAATATGGAAGAATTGTTTCATTCCAATC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATTCAGCTGTATTTAGCAATATGGAAGAATTGTTTCATTCCAATC  1129

seq1  TTCCTATGGATCAACTGCTTAATTCTACAGCATATGCTTCTCCTGTTACA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGATCAACTGCTTAATTCTACAGCATATGCTTCTCCTGTTACA  1179

seq1  GGAGCCTACCATGCTTCTTCAAAGGAATTC  1225
      ||||||||||||||||||||||||||||||
seq2  GGAGCCTACCATGCTTCTTCAAAGGAATTC  1209


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