BAC Information

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BAC

Clone NameB6Ng01-158I09
Chromosome1 (Build37)
Map Location 10,757,511 - 10,758,189
singlet/doubletsinglet
Overlap geneLOC433271
Upstream geneLOC100039536, LOC665173, Sgk3, EG620986, LOC100039643, 6030422M02Rik, LOC100039596, 4930418G15Rik, Cops5, Cspp1, Arfgef1, Cpa6
Downstream geneC030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158I09.bB6Ng01-158I09.g
ACCDH952450DH952451
length1,2651,025
definitionDH952450|Mus musculus domesticus DNA, BAC clone: B6Ng01-158I09, 5' end.DH952451|Mus musculus domesticus DNA, BAC clone: B6Ng01-158I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaattcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtgcctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttcttctcttcggtcagtcgatcatagggaacaccccatgag
ctatagcacatgtttggcagcagatggcattgtaacaggagtagaaacca
taggcattgagcactttcttcatgtaacttgctttgtgccttcaggactg
cctctggcccgaacacgtatataccactccatttgaatatagacctgctg
ctgtgcgcgtcccacttttgacttgctaggctgatagatacccagctctg
agggagttcaaggctccaatgtaacttggtgcctaatgtccaacgtcaga
tcctagaccaatcggcccagacgtctctttcagaggaaaatggttcgtct
gaagtatggtagcat
gaattccttggtgatgaacagcagtatggaagtgtaagccgaataaaccc
tttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaa
ccctgactaagacaaaacctaaataatccttcacaatcatgtccagagac
atgtcttttctatgatcctagatcctgtcaagtagacagttgatattaat
ttaaccactggacaagtagcttttaccgacctgatataattgtcatcttg
gaggcttactgctgaataagctcaccctttctagtttgttctgaactttg
gctggcagcttcaactcagctgttgtggcccaaactcctctccaagctga
cataattcaatatgagttttctcagcttctcattgaattgctctgcttgg
cctcaaactaaccccagcaatctgttctgatcttctggctccttttgtct
tcacttgtgtctaacttgttctctctacagcctgacgctgtaaagctgcc
cctgtaaaaactgcttctgaactccacaaactaactgccataatctcaac
tccattgccctgcctctcaattcactgattcaaacagactgactagattt
ggatgtctctgtctcctgagtactgggattaaaggtgtttcctatctcac
ctgaacctgagcttttctttatctgaaacttgttctatacaaggctgtcc
tggaactcagagatctgctcgccttttgtcttctgggactaaaggtatgt
ctgtattccagtcagatcgcacaggtttagaaggtcattggatgtgatct
cttgcctcaatccagcagtcatattgctggattaaaatttctctccaaac
cacactcgattgaatttaacattccccatagtttcacatggtactaaatg
caccttggaaaattctatattatttctgtattttcagttttcttcacaaa
agtgtatcacagtgagtatccttctgtcaatttatgaactatcttgctgt
tcatcctcaacagctgtcttgtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_10757511_10758189
seq2: B6Ng01-158I09.g_422_1093

seq1  TAATTCAATATGAGTTTTCTCAGCTTCTCATTGAATTGCTCTGCTTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAATATGAGTTTTCTCAGCTTCTCATTGAATTGCTCTGCTTGGCC  50

seq1  TCAAACTAACCCCAGCAATCTGTTCTGATCTTCTGGCTCCTTTTGTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTAACCCCAGCAATCTGTTCTGATCTTCTGGCTCCTTTTGTCTTC  100

seq1  ACTTGTGTCTAACTTGTTCTCTCTACAGCCTGACGCTGTAAAGCTGCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGTCTAACTTGTTCTCTCTACAGCCTGACGCTGTAAAGCTGCCCC  150

seq1  TGTAAAAACTGCTTCTGAACTCCACAAACTAACTGCCATAATCTCAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAACTGCTTCTGAACTCCACAAACTAACTGCCATAATCTCAACTC  200

seq1  CATTGCCCTGCCTCTCAATTCACTGATTCAAACAGACTGACTAGATTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCCTGCCTCTCAATTCACTGATTCAAACAGACTGACTAGATTTGG  250

seq1  ATGTCTCTGTCTCCTGAGTACTGGGATTAAAGGTGTTTCCTATCTCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTGTCTCCTGAGTACTGGGATTAAAGGTGTTTCCTATCTCACCT  300

seq1  GAACCTGAGCTTTTCTTTACCTGAAACTTGTTCTATACAAGGCTGTCCTG  350
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAACCTGAGCTTTTCTTTATCTGAAACTTGTTCTATACAAGGCTGTCCTG  350

seq1  GAACTCAGAGATCTGCTCGCC-TTTGTCTTCTGGGACTAAAGGTATGTCT  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAACTCAGAGATCTGCTCGCCTTTTGTCTTCTGGGACTAAAGGTATGTCT  400

seq1  GTATTCCAGTCAGATCGCACAGGTTTAGAAGGTCATTGGATGTGATCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCAGTCAGATCGCACAGGTTTAGAAGGTCATTGGATGTGATCTCT  450

seq1  TGCCTCAATCCAGCAGTCATATTGCTGGATTAAAATTTCTCTCCAAACCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCCTCAATCCAGCAGTCATATTGCTGGATTAAAATTTCTCTCCAAACC-  499

seq1  ACACTCGATTGAATTTAACATTCCCCATAGTTTCACATGGTAATTAAATG  549
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  ACACTCGATTGAATTTAACATTCCCCATAGTTTCACATGGT-ACTAAATG  548

seq1  CACCTTGGGAAAATTCTATATTATTTCTGTA-TTTCAG-TTTCTTCACCA  597
      |||||| |||||||||||||||||||||||| |||||| |||||||||  
seq2  CACCTT-GGAAAATTCTATATTATTTCTGTATTTTCAGTTTTCTTCAC--  595

seq1  AAAAGGTGTATCACAGTGAGTAACCCTTCTGCCAATTTTATGAACTATCT  647
       ||| |||||||||||||||| | ||||||| ||| ||||||||||||||
seq2  -AAAAGTGTATCACAGTGAGT-ATCCTTCTGTCAA-TTTATGAACTATCT  642

seq1  TGCTGGTTCATCCTCAAACAGCTGTCTTGTCT  679
      |||| |||||||||| ||||||||||||||||
seq2  TGCT-GTTCATCCTC-AACAGCTGTCTTGTCT  672