BAC Information

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BAC

Clone NameB6Ng01-158O14
Chromosome1 (Build37)
Map Location 28,625,992 - 28,627,125
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040952, EG433281
Downstream geneEG665903, Gm597, LOC435614, EG623924, EG433283
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O14.bB6Ng01-158O14.g
ACCDH952731DH952732
length1,2141,138
definitionDH952731|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O14, 5' end.DH952732|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggtggaatttttagggtcacttatatatactatcatatcat
ctgcaaacagtgatattttgacttctgcctttcaaatttgtatcctcttg
atctccttttgttgtctaattgctctggctatgacttcaaatactatgtt
gaggaggtagggagaaaatgggcagccttgtctagtccctgattttagtg
ggattgcttccaggttctcaccttttactttggtgttggctactggtttg
ctgtagattgcttttatcatgtttatgtatgggcattgaattcatgacct
ttctaagactttcatcatgaatgggtgttggattttgtcaaatgcattct
ctgcatctaacaagatgatcatgtggtttttatccttgtgtttgtttata
tactggattacgttgatggatttctgtatattaaaccatccctgcatccc
tagaatgaagcctatttggtcaggatggatgattgttttgatgtgttctt
tgattcagttgagaattttattgagtatttttgtgtcaatatttataagg
gaaattggtctgaaattctctatctttgttgtgtttttctgtggtttagg
tatcagagtaattgtggctttacagaatgaattgggtagagtactttctg
cttctatttagtggaattgtttgtgaagaactggagttagatcttctttg
aaggtctgatagaactctgcactaaacccatctggtcctgggcttttttg
ggttgggagactattaatgactgcttctatttctttaggggttataggac
tgtttagatcattaacctgatcctgagttatctttggtacctggtatctg
tctagaaactttgtccattagattcaggttctccagttttgttgagtata
gcattttgtagaaggatctgtgggtgttttgtatttctttaggatctgtt
gtatgtctctgtttcattttctgattctgtgattaggatgctgtccctgt
gcatctagtggattctgtctagggtttgtctaaattgttgattttctcaa
aaaccatctcctcgtttggttgatttctttagaagtcttggttttccctt
gttgtattttgccccgtaaatttgattatttcggcctttctacctccctg
gatggagtttctcctctgttacgactctttaagggtgatgttcatacgtt
cttatggggtgagt
gaattcttaaggacaatgatttttgcatttgagaaagtttcttgaaattg
aaggcaaaatattaattatattttttcaagaaacccataaaatatgtagt
tttagaaacagtccaaatggaaaatgcatgtgtctatagaagtcataaat
cactagtgtatgaaattaaaaacataagaggccacaaacttaaaaataga
ataaattacttcagacataaattatttagctgccaataaatttatgctat
tgtgtatttttactttgtacttttggagacaaaccaaacagttcatttta
aaagtcttaaacatacaggtgcaggctctattaccatattttatatggaa
tgcaaattaactatttaaataattgcattctcatttcattgaaactttaa
ttatggcaagatgatttctttattcacaagcatttgaaaattctcattaa
atagtatcaaacttttttttaattgcaaaggaactcatatatacaccttt
atgttgtctcaaaactgatttttttaactcataattttatcaactcacat
ttaaagtttctccaaatttattgaggaaagcacaataagtcagccaaaat
gtcatttcacatatttatgtattagtttaggtttgtagatttgtgtaaag
acatattttccccctgtctctgcatttctttttcttttcctttctttctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
tttctttctttcttttttttagatattttcttcattacatttcaaatgcc
atcccgaaagtctcctttatgttgttatgaaagatcagctttagtctgtg
gtgatctgatagggatggttgggataatttcaatatttttgtatctgttg
aggcctgttttgtgatcgatatatggtcaattttggagaagcatcatgaa
gtgcgagaagaaggtatatcctttttgttttaggataaaatgttctgtag
atatctggtaaggtcatttgttcataacttctgtggtttcactgtgacct
ctttttagtttctttttcaggattgggagggtgatataaacaggtctttt
aatagaccaatgttggattattcagggggaagccacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28625992_28627125
seq2: B6Ng01-158O14.g_67_1204

seq1  GAATTCTTAAGGACAATGATTTTTGCATTTGAGAAAGTTTCTTGAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGGACAATGATTTTTGCATTTGAGAAAGTTTCTTGAAATTG  50

seq1  AAGGCAAAATATTAATTATATTTTTTCAAGAAACCCATAAAATATGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAAATATTAATTATATTTTTTCAAGAAACCCATAAAATATGTAGT  100

seq1  TTTAGAAACAGTCCAAATGGAAAATGCATGTGTCTATAGAAGTCATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAACAGTCCAAATGGAAAATGCATGTGTCTATAGAAGTCATAAAT  150

seq1  CACTAGTGTATGAAATTAAAAACATAAGAGGCCACAAACTTAAAAATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGTGTATGAAATTAAAAACATAAGAGGCCACAAACTTAAAAATAGA  200

seq1  ATAAATTACTTCAGACATAAATTATTTAGCTGCCAATAAATTTATGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTACTTCAGACATAAATTATTTAGCTGCCAATAAATTTATGCTAT  250

seq1  TGTGTATTTTTACTTTGTACTTTTGGAGACAAACCAAACAGTTCATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTTTACTTTGTACTTTTGGAGACAAACCAAACAGTTCATTTTA  300

seq1  AAAGTCTTAAACATACAGGTGCAGGCTCTATTACCATATTTTATATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTAAACATACAGGTGCAGGCTCTATTACCATATTTTATATGGAA  350

seq1  TGCAAATTAACTATTTAAATAATTGCATTCTCATTTCATTGAAACTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTAACTATTTAAATAATTGCATTCTCATTTCATTGAAACTTTAA  400

seq1  TTATGGCAAGATGATTTCTTTATTCACAAGCATTTGAAAATTCTCATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCAAGATGATTTCTTTATTCACAAGCATTTGAAAATTCTCATTAA  450

seq1  ATAGTATCAAACTTTTTTTTAATTGCAAAGGAACTCATATATACACCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATCAAACTTTTTTTTAATTGCAAAGGAACTCATATATACACCTTT  500

seq1  ATGTTGTCTCAAAACTGATTTTTTTAACTCATAATTTTATCAACTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCTCAAAACTGATTTTTTTAACTCATAATTTTATCAACTCACAT  550

seq1  TTAAAGTTTCTCCAAATTTATTGAGGAAAGCACAATAAGTCAGCCAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTTCTCCAAATTTATTGAGGAAAGCACAATAAGTCAGCCAAAAT  600

seq1  GTCATTTCACATATTTATGTATTAGTTTAGGTTTGTAGATTTGTGTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCACATATTTATGTATTAGTTTAGGTTTGTAGATTTGTGTAAAG  650

seq1  ACATATTTTCCCCCTGTCTCTGCATTTCTTTTTCTTTTCCTTTCTTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTCCCCCTGTCTCTGCATTTCTTTTTCTTTTCCTTTCTTTCTT  700

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  750

seq1  TTTCTTTCTTTCTTTTTTTTAGATATTTTCTTCATTACATTTCAAATGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTTTTTTAGATATTTTCTTCATTACATTTCAAATGCC  800

seq1  ATCCCGAAAGTCCCCTTTATGTTGTTATGAAAGATCAGCTTTAGTCTGTG  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCCGAAAGTCTCCTTTATGTTGTTATGAAAGATCAGCTTTAGTCTGTG  850

seq1  GTGATCTGATA-GGATGGTTGGGATAATTTCAATATTTTTGTATCTGTTG  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTGATAGGGATGGTTGGGATAATTTCAATATTTTTGTATCTGTTG  900

seq1  AGGCCTGTTTTGTGATCGATTATATGGTCAATTTTGGAGAAAGCATCATG  949
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  AGGCCTGTTTTGTGATCGA-TATATGGTCAATTTTGGAG-AAGCATCATG  948

seq1  AAGTGCGAGAAGAAGGTATATCC-TTTTGTTTTAGGATAAAATGTTCTGT  998
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTGCGAGAAGAAGGTATATCCTTTTTGTTTTAGGATAAAATGTTCTGT  998

seq1  AGATATCTGTTAAGTCCATTTGTTTCATAACTTCTGTTGGTTTCACTGTG  1048
      ||||||||| ||||  |||||| ||||||||||||| |||||||||||||
seq2  AGATATCTGGTAAGGTCATTTG-TTCATAACTTCTG-TGGTTTCACTGTG  1046

seq1  A-CTCTTTTTAGTTTCTTTTTCCAGGATTTGGA-GGTGATATAAACA-GT  1095
      | ||||||||||||||||||| ||||||| ||| ||||||||||||| ||
seq2  ACCTCTTTTTAGTTTCTTTTT-CAGGATTGGGAGGGTGATATAAACAGGT  1095

seq1  C-TTTAATAGA-CAATGTTGTATTAATCA-GGGGAAG-CACAT  1134
      | ||||||||| |||||||| |||| ||| ||||||| |||||
seq2  CTTTTAATAGACCAATGTTGGATTATTCAGGGGGAAGCCACAT  1138