BAC Information

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BAC

Clone NameB6Ng01-159D13
Chromosome1 (Build37)
Map Location 132,878,079 - 133,015,451
singlet/doubletdoublet
Overlap geneIl10, Mapkapk2
Upstream geneThsd7b, Daf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19
Downstream geneDyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b, LOC667238, Ctse, 5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1, Slc45a3, Elk4, Mfsd4, Pctk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159D13.bB6Ng01-159D13.g
ACCDH952951DH952952
length975920
definitionDH952951|Mus musculus domesticus DNA, BAC clone: B6Ng01-159D13, 5' end.DH952952|Mus musculus domesticus DNA, BAC clone: B6Ng01-159D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,878,079 - 132,878,791)(133,014,336 - 133,015,451)
sequence
gaattcataaaacactcataatgttcagtggtactccaaaaatattttta
agaatggcatacaatgccccaaccaactgacatatcaaactaactcgata
tctcagatcttcagtctatggcctgtagggtatacatgttgagaaatgta
tcaaactctatccatatattttaaagtttgtgtaaattttcagtttctcc
tggagggatctaacctcttgcgcgcgctcgactggccaggaagaacgacg
ctgcaacaggatccttctgcacacgtttattggaagagcttgattataga
ggcaaaaagaccctgagcccagaactggtgctgcttacataggcctagga
gagacgtgtctcacatctgattggttaacttgtcttggcaaaagaacctt
cactgcctatgtatgtgtggtggccagcagtagccaactgccactctgca
acggcttcccacatctcctcctttttgttttaataaaatgagactggtct
aggcctgtgcaattatgtccatccgccatggctcctgttttaggtcgttc
ctctaatgtcacagcctttcccgtcatagggtaaccctatcgccactggg
ccccgtgtcttaggttggtctgtgcatgaggaaagttgcccgtctctgga
taccgcagtactgtgtgacagtaactgctaaatgacctagggcgaactta
tggcccacaaaggtatacttatcccggtctcaatcatcaggagcagaatc
atctttggattcatcttgatctttcacgaacccaaagtagattttcttta
cccggtaccaccgttcctcagctgaagagttctgaatccacgcagtcaga
tccttctcagcagtctgttttgcaggacacttcattaccaccattcttca
gctgaagagttctgaatccatgctggatccttctcaacagtctgtttacg
ggaacctttattaaccgctccttcc
gaattcactggattcataagcctgggaagttcagctccatgggctgaaca
cacctcccactcgcagcaagcccttatcccacgtaggcatagaagtcgga
tgtgtttgataaggtctaatattagtctgagcaaacttttagaaaaccac
agaggcgggagtgactaatagcctcaggcaggtgactgccgagtagtgcc
cttaacgagaaggatttgtcatgcaaggaagggaattcctgacacacaac
ttgaaatgtgtaggaacagcaaaaagcaaaaaaaaacgctccggagctgc
agagaaggctcagggtttaagagggtgtactgttcttgctgaggactggt
cttcaattcctcgtgtcagacagctcacaacctcctaaaactcaagttcc
ggtgcctctggcctcagggtcaccatctctcacgtgactgtacacccaca
aagaccccctccccagtgtatgtgtgcaattaaaccaaataacaaaactt
taaaaatgtgacaaagagtggccagagcagaggacgcaggaggaagagaa
gctggagaggggtttagcttgcatcaaacaacatacctccaagtaaggag
cacgtcggttgtgcagacaaggaaccagagggggtcctaacgtggcagta
gagggatggcttttccaattcactagcaggaagcaatgtttgcacaagta
ccatccaggacctggggatgggatccacctctcacctccccattcctcac
ttctaccacataccccacctcttaccccccctcctcacctctaccacacc
tccacctctcacctccccatcctcactgctaccacataccccacctctct
cttctccctcctcacctctaccacaccccactttcactcccatccttaac
ttctaccacaccccccacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132878079_132878791
seq2: B6Ng01-159D13.b_47_759

seq1  GAATTCATAAAACACTCATAATGTTCAGTGGTACTCCAAAAATATTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAACACTCATAATGTTCAGTGGTACTCCAAAAATATTTTTA  50

seq1  AGAATGGCATACAATGCCCCAACCAACTGACATATCAAACTAACTCGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCATACAATGCCCCAACCAACTGACATATCAAACTAACTCGATA  100

seq1  TCTCAGATCTTCAGTCTATGGCCTGTAGGGTATACATGTTGAGAAATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATCTTCAGTCTATGGCCTGTAGGGTATACATGTTGAGAAATGTA  150

seq1  TCAAACTCTATCCATATATTTTAAAGTTTGTGTAAATTTTCAGTTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCTATCCATATATTTTAAAGTTTGTGTAAATTTTCAGTTTCTCC  200

seq1  TGGAGGGATCTAACCTCTTGCGCGCGCTCGACTGGCCAGGAAGAACGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGATCTAACCTCTTGCGCGCGCTCGACTGGCCAGGAAGAACGACG  250

seq1  CTGCAACAGGATCCTTCTGCACACGTTTATTGGAAGAGCTTGATTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACAGGATCCTTCTGCACACGTTTATTGGAAGAGCTTGATTATAGA  300

seq1  GGCAAAAAGACCCTGAGCCCAGAACTGGTGCTGCTTACATAGGCCTAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAAGACCCTGAGCCCAGAACTGGTGCTGCTTACATAGGCCTAGGA  350

seq1  GAGACGTGTCTCACATCTGATTGGTTAACTTGTCTTGGCAAAAGAACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGTGTCTCACATCTGATTGGTTAACTTGTCTTGGCAAAAGAACCTT  400

seq1  CACTGCCTATGTATGTGTGGTGGCCAGCAGTAGCCAACTGCCACTCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTATGTATGTGTGGTGGCCAGCAGTAGCCAACTGCCACTCTGCA  450

seq1  ACGGCTTCCCACATCTCCTCCTTTTTGTTTTAATAAAATGAGACTGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTTCCCACATCTCCTCCTTTTTGTTTTAATAAAATGAGACTGGTCT  500

seq1  AGGCCTGTGCAATTATGTCCATCCGCCATGGCTCCTGTTTTAGGTCGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGTGCAATTATGTCCATCCGCCATGGCTCCTGTTTTAGGTCGTTC  550

seq1  CTCTAATGTCACAGCCTTTCCCGTCATAGGGTAACCCTATCGCCACTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATGTCACAGCCTTTCCCGTCATAGGGTAACCCTATCGCCACTGGG  600

seq1  CCCCGTGTCTTAGGTTGGTCTGTGCATGAGGAAAGTTGCCCGTCTCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTGTCTTAGGTTGGTCTGTGCATGAGGAAAGTTGCCCGTCTCTGGA  650

seq1  TACCGCAGTACTGTGTGACAGTAACTGCTAAATGACCTAGGGCGAACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGCAGTACTGTGTGACAGTAACTGCTAAATGACCTAGGGCGAACTTA  700

seq1  TGGCCCACAAAGG  713
      |||||||||||||
seq2  TGGCCCACAAAGG  713

seq1: chr1_133014336_133015451
seq2: B6Ng01-159D13.g_67_986 (reverse)

seq1  AGGTGGGGGGTGTGGTAGAGGTGAGGATGGGGAGGTGAGAGGTGGGGGGT  50
                                                        
seq2  --------------------------------------------------  0

seq1  GTGGTAGAGGTGAGGATGGGGAGGTGAGAGGTGGGGGGTGTGGTAGAGGT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGAAGGGGAGGTGAGAGGTGGGGGGTGTGGTAGAGGTGAGGATGGGGA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGAGAGGTGGGGGGTGTGGTAGAGGTGAGGATGGGGAGGTGAGAGGTG  200
                                                   |||||
seq2  ---------------------------------------------AGGTG  5

seq1  GGGGGTGTGGTAG-AGGTGAGGATGGGGAGGTGAGAGGTGGGGGTGTGGT  249
      ||||||||||||| || | ||||||||   |||| ||   ||||||||||
seq2  GGGGGTGTGGTAGAAGTTAAGGATGGG--AGTGAAAG--TGGGGTGTGGT  51

seq1  AGAGGTGAGGAGGGAGAAGAGAGAGGTGGGGTATGTGGTAGAAGTGAGGA  299
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAGGTGAGGAGGGAGAAGAGAGAGGTGGGGTATGTGGTAGCAGTGAGGA  101

seq1  TGGGGAGGTGAGAGGTGGAGGTGTGGTAGAGGTGAGGAGGGGGGGTAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGTGAGAGGTGGAGGTGTGGTAGAGGTGAGGAGGGGGGGTAAGA  151

seq1  GGTGGGGTATGTGGTAGAAGTGAGG-ATGGGGAGGTGAGAGGTGGATCCC  398
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGTGGGGTATGTGGTAGAAGTGAGGAATGGGGAGGTGAGAGGTGGATCCC  201

seq1  AT-CCCAGGTCCTGGATGGTACTTGTGCAAACATTGCTTCCTGCTAGTGA  447
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGGTCCTGGATGGTACTTGTGCAAACATTGCTTCCTGCTAGTGA  251

seq1  ATTGGAAAAGCCATCCCTCTACTGCCACGTTAGGACCCCCTCTGGTTCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAAGCCATCCCTCTACTGCCACGTTAGGACCCCCTCTGGTTCCT  301

seq1  TGTCTGCACAACCGACGTGCTCCTTACTTGGAGGTATGTTGTTTGATGCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCACAACCGACGTGCTCCTTACTTGGAGGTATGTTGTTTGATGCA  351

seq1  AGCTAAACCCCTCTCCAGCTTCTCTTCCTCCTGCGTCCTCTGCTCTGGCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAACCCCTCTCCAGCTTCTCTTCCTCCTGCGTCCTCTGCTCTGGCC  401

seq1  ACTCTTTGTCACATTTTTAAAGTTTTGTTATTTGGTTTAATTGCACACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGTCACATTTTTAAAGTTTTGTTATTTGGTTTAATTGCACACAT  451

seq1  ACACTGGGGAGGGGGTCTTTGTGGGTGTACAGTCACGTGAGAGATGGTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGGGAGGGGGTCTTTGTGGGTGTACAGTCACGTGAGAGATGGTGA  501

seq1  CCCTGAGGCCAGAGGCACCGGAACTTGAGTTTTAGGAGGTTGTGAGCTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGGCCAGAGGCACCGGAACTTGAGTTTTAGGAGGTTGTGAGCTGT  551

seq1  CTGACACGAGGAATTGAAGACCAGTCCTCAGCAAGAACAGTACACCCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACGAGGAATTGAAGACCAGTCCTCAGCAAGAACAGTACACCCTCT  601

seq1  TAAACCCTGAGCCTTCTCTGCAGCTCCGGAGCGTTTTTTTTTGCTTTTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTGAGCCTTCTCTGCAGCTCCGGAGCGTTTTTTTTTGCTTTTTG  651

seq1  CTGTTCCTACACATTTCAAGTTGTGTGTCAGGAATTCCCTTCCTTGCATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTACACATTTCAAGTTGTGTGTCAGGAATTCCCTTCCTTGCATG  701

seq1  ACAAATCCTTCTCGTTAAGGGCACTACTCGGCAGTCACCTGCCTGAGGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCTTCTCGTTAAGGGCACTACTCGGCAGTCACCTGCCTGAGGCT  751

seq1  ATTAGTCACTCCCGCCTCTGTGGTTTTCTAAAAGTTTGCTCAGACTAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCACTCCCGCCTCTGTGGTTTTCTAAAAGTTTGCTCAGACTAATA  801

seq1  TTAGACCTTATCAAACACATCCGACTTCTATGCCTACGTGGGATAAGGGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTTATCAAACACATCCGACTTCTATGCCTACGTGGGATAAGGGC  851

seq1  TTGCTGCGAGTGGGAGGTGTGTTCAGCCCATGGAGCTGAACTTCCCAGGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCGAGTGGGAGGTGTGTTCAGCCCATGGAGCTGAACTTCCCAGGC  901

seq1  TTATGAATCCAGTGAATTC  1116
      |||||||||||||||||||
seq2  TTATGAATCCAGTGAATTC  920