BAC Information

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BAC

Clone NameB6Ng01-159L20
Chromosome1 (Build37)
Map Location 91,661,415 - 91,858,828
singlet/doubletdoublet
Overlap geneCentg2, Gbx2, Asb18
Upstream geneLOC208347, Sh3bp4, LOC383542, EG665688
Downstream geneIqca, Cxcr7, Cops8, Col6a3, Mlph, Prlh, Rab17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159L20.bB6Ng01-159L20.g
ACCDH953313DH953314
length38664
definitionDH953313|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L20, 5' end.DH953314|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,661,415 - 91,661,806)(91,858,765 - 91,858,828)
sequence
tcagcttgacgggttataggatcatctaggcacgtgaggaaattagtaga
ttgggtgttagttaataaagagtggaccctaagtgcgagtggcaccgttc
cacgatctgtggccccaggctgaagaaatctggaggattcagctgagcac
tggtcctcagggtcctggctgtagttacaatgtgaccagtagactgttcc
ctcaagctgtcagtcaaacacaaacaacttctcatatgctgctttcttca
ggtttgctgtcagagtgatgggacagataatcagcggtctttacttagca
cattgtggtgttctgctccatgctgcctctcaccaagcaactacgttact
ggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
ctggagacaggcaataagactttgtcacagtctatgaccccgggtggggg
aggggttgggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_91661415_91661806
seq2: B6Ng01-159L20.b_49_440

seq1  GAATTCTCAGCTTGACGGGTTATAGGATCATCTAGGCACGTGAGGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTTGACGGGTTATAGGATCATCTAGGCACGTGAGGAAATT  50

seq1  AGTAGATTGGGTGTTAGTTAATAAAGAGTGGACCCTAAGTGCGAGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTGGGTGTTAGTTAATAAAGAGTGGACCCTAAGTGCGAGTGGCA  100

seq1  CCGTTCCACGATCTGTGGCCCCAGGCTGAAGAAATCTGGAGGATTCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCCACGATCTGTGGCCCCAGGCTGAAGAAATCTGGAGGATTCAGCT  150

seq1  GAGCACTGGTCCTCAGGGTCCTGGCTGTAGTTACAATGTGACCAGTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTGGTCCTCAGGGTCCTGGCTGTAGTTACAATGTGACCAGTAGAC  200

seq1  TGTTCCCTCAAGCTGTCAGTCAAACACAAACAACTTCTCATATGCTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTCAAGCTGTCAGTCAAACACAAACAACTTCTCATATGCTGCTT  250

seq1  TCTTCAGGTTTGCTGTCAGAGTGATGGGACAGATAATCAGCGGTCTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGTTTGCTGTCAGAGTGATGGGACAGATAATCAGCGGTCTTTAC  300

seq1  TTAGCACATTGTGGTGTTCTGCTCCATGCTGCCTCTCACCAAGCAACTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACATTGTGGTGTTCTGCTCCATGCTGCCTCTCACCAAGCAACTAC  350

seq1  GTTACTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  392
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  392

seq1: chr1_91858765_91858828
seq2: B6Ng01-159L20.g_74_137 (reverse)

seq1  TTCCCCCAACCCCTCCCCCACCCGGGGTCATAGACTGTGACAAAGTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCAACCCCTCCCCCACCCGGGGTCATAGACTGTGACAAAGTCTTA  50

seq1  TTGCCTGTCTCCAG  64
      ||||||||||||||
seq2  TTGCCTGTCTCCAG  64