BAC Information

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BAC

Clone NameB6Ng01-160N12
Chromosome1 (Build37)
Map Location 68,425,851 - 68,526,556
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160N12.bB6Ng01-160N12.g
ACCDH954112DH954113
length1,1161,105
definitionDH954112|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N12, 5' end.DH954113|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,525,440 - 68,526,556)(68,425,851 - 68,426,962)
sequence
gaattcaaacttaggtcaggttctctaaagtggagcctggatttaaaact
ttggcatctcaacatcaaatccatatatgaaataagcccatggtttcaga
ggttttgatccatggcactcagctctgttatttacattcatacacaataa
agcagatgatcatgtcaatggttaggtaatgaaatataatggctcacacc
acagcaatctggaagcagaaagcagaaaggttagggcttttcggtcatgc
caaaataacctattgccaaatgtattagtgcttaccactctccttcacct
cccaatattatcaaattttaattccatcaatctatttatgaacccccccc
aaattgtcttcagtatccagtcgcttactcaaagcaacaaaactttcgac
acatgttccttttgctctattttatttttatgaaactatgacataaactc
ttctgaaatttggtcaaaatcttagccaaatggttagctggaaaatcact
gtgcagacctacatacttactactcatgcaattatagttacatttgctat
aatacttgaggtatagtattgttaactatttttaaaatacatttttacat
aagctaattcacccctgtacactcgtattatataaaaacttactgaaaaa
tactgagtatgagagatatattgatttagatcatagtggaaatttgtagt
aatctatacctatacaaacatttgaataactaaaagtatatctacaagtt
ttatatattacagagttacatgaaaaattacctagttgcatcattaagaa
aacgttttattcaagatacactatgtaaaaatagctagttgtaaaagtta
cacaacattccttcaaggaaacttactttgaaaatctctaaggggtgaaa
tgctgacaatatttccacactgtgtatctatgtacttatttctgatatgt
aacaaaaattcagaggagtgtattctagtgcctcacccaattcatttttg
tcctaaaagaatgccctgatactgcaggttctttgataactgtcacaatc
tctgaaacaggagaatgaccagttattctacgtgtcctcgagggcgtttg
cttaattatttcttca
gaattcaaaaaaaaaaaaccaaaaaaaatgctcagagtttatttcatgtc
acagtaaattaaataactagttattcaactgaaatactttaagtaaaaca
cttctaaagaagagatatttaatgtcaatgttgttaaactagacttttta
aaagaaaaatctagataaatttatattctatagtcaatgatttagaatat
catttattctcatatgatgaagatagatttcaaatagaagtataaaacct
agcatatttagtctgcagtcctatgcattccttcttcagggattcgatac
ctgacttctagtcaatggctaccactgtacaccatttctctttagaacag
cagcagggaggggaatctattggaagaactaattttcatcaagtcaatgt
ggcacaaacttcgaaggtgtttgtgattttccattttgcttaagtgcccc
ctgcaaatagaaatatgtctgggagagaaatggcaatgataggaattcaa
ggtacatatggaagtcaggacagaataaattagtaagttaccacactgct
acctttcagatcttatacttgaattaagatggtaacttaattgttggcct
aatttataccctgacctacttatgatctgtagtcagtatagacattgtaa
tctccatcagaccatgaagcatcagctggtcttctacctctgaaaaaaaa
aagcaatggtccttacttggggtattcagtatcctacaatactcagcact
ctcctccatgccaccatggtcctacctactgcttttctccatggcatggt
ccttccatgggcatctcttactggttttattcaagtctttatgtttggat
gtctaagtctattatatgtaacatattcagttacctatttttacttttat
gatttttttctggtatgtggagattattatacatcactaattaaaatgag
cactagaaataatactaatttataggcatatttttcagaagattttgagt
ttgtaaagcatgcttgaatgcagaatgaccttgagcatgtctttcaacat
cccctccttgaagactaaatggatctggaaaagttgtatggatttctgga
tgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68525440_68526556
seq2: B6Ng01-160N12.b_45_1160 (reverse)

seq1  TGAAGAAAATAATATAGCAAACG-CCTCGAGGACACGGTAG-ATAACTGG  48
      ||||| |||||||  |||||||| |||||||||||| |||| ||||||||
seq2  TGAAG-AAATAATTAAGCAAACGCCCTCGAGGACAC-GTAGAATAACTGG  48

seq1  TCA-TCTCCTGTTTCAAGAGATTGTGACAG-TATCAAAAGAACTTGCAGT  96
      ||| ||||||||||| |||||||||||||| |||| ||||||| ||||||
seq2  TCATTCTCCTGTTTC-AGAGATTGTGACAGTTATC-AAAGAACCTGCAGT  96

seq1  ATCAGGGCATTCTTTTAGGAACAAAAATGAATTGGGTGAGGCACTAGAAT  146
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCAGGGCATTCTTTTAGG-ACAAAAATGAATTGGGTGAGGCACTAGAAT  145

seq1  ACACTCCTCTGAATTTTTGTTACATATCAGAAATAAGTACATAGATACAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTCTGAATTTTTGTTACATATCAGAAATAAGTACATAGATACAC  195

seq1  AGTGTGGAAAATATTGTCAGCATTTCACCCCTAAGAGATTTTC-AAGTAA  245
      ||||||| |||||||||||||||||||||||| |||||||||| ||||||
seq2  AGTGTGG-AAATATTGTCAGCATTTCACCCCTTAGAGATTTTCAAAGTAA  244

seq1  GTTTCCTTGAAGGAATGTTGTGTAACTTTTACAACTAGCTATTTTTACAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTGAAGGAATGTTGTGTAACTTTTACAACTAGCTATTTTTACAT  294

seq1  AGTGTATCTTGAATAAAACGTTTTCTTAATGATGCAACTAGGTAATTTTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATCTTGAATAAAACGTTTTCTTAATGATGCAACTAGGTAATTTTT  344

seq1  CATGTAACTCTGTAATATATAAAACTTGTAGATATACTTTTAGTTATTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAACTCTGTAATATATAAAACTTGTAGATATACTTTTAGTTATTCA  394

seq1  AATGTTTGTATAGGTATAGATTACTACAAATTTCCACTATGATCTAAATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGTATAGGTATAGATTACTACAAATTTCCACTATGATCTAAATC  444

seq1  AATATATCTCTCATACTCAGTATTTTTCAGTAAGTTTTTATATAATACGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCTCTCATACTCAGTATTTTTCAGTAAGTTTTTATATAATACGA  494

seq1  GTGTACAGGGGTGAATTAGCTTATGTAAAAATGTATTTTAAAAATAGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAGGGGTGAATTAGCTTATGTAAAAATGTATTTTAAAAATAGTTA  544

seq1  ACAATACTATACCTCAAGTATTATAGCAAATGTAACTATAATTGCATGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACTATACCTCAAGTATTATAGCAAATGTAACTATAATTGCATGAG  594

seq1  TAGTAAGTATGTAGGTCTGCACAGTGATTTTCCAGCTAACCATTTGGCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGTATGTAGGTCTGCACAGTGATTTTCCAGCTAACCATTTGGCTA  644

seq1  AGATTTTGACCAAATTTCAGAAGAGTTTATGTCATAGTTTCATAAAAATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGACCAAATTTCAGAAGAGTTTATGTCATAGTTTCATAAAAATA  694

seq1  AAATAGAGCAAAAGGAACATGTGTCGAAAGTTTTGTTGCTTTGAGTAAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAGCAAAAGGAACATGTGTCGAAAGTTTTGTTGCTTTGAGTAAGC  744

seq1  GACTGGATACTGAAGACAATTTGGGGGGGGTTCATAAATAGATTGATGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGATACTGAAGACAATTTGGGGGGGGTTCATAAATAGATTGATGGA  794

seq1  ATTAAAATTTGATAATATTGGGAGGTGAAGGAGAGTGGTAAGCACTAATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTGATAATATTGGGAGGTGAAGGAGAGTGGTAAGCACTAATA  844

seq1  CATTTGGCAATAGGTTATTTTGGCATGACCGAAAAGCCCTAACCTTTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGCAATAGGTTATTTTGGCATGACCGAAAAGCCCTAACCTTTCTG  894

seq1  CTTTCTGCTTCCAGATTGCTGTGGTGTGAGCCATTATATTTCATTACCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTTCCAGATTGCTGTGGTGTGAGCCATTATATTTCATTACCTA  944

seq1  ACCATTGACATGATCATCTGCTTTATTGTGTATGAATGTAAATAACAGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGACATGATCATCTGCTTTATTGTGTATGAATGTAAATAACAGAG  994

seq1  CTGAGTGCCATGGATCAAAACCTCTGAAACCATGGGCTTATTTCATATAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGCCATGGATCAAAACCTCTGAAACCATGGGCTTATTTCATATAT  1044

seq1  GGATTTGATGTTGAGATGCCAAAGTTTTAAATCCAGGCTCCACTTTAGAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGATGTTGAGATGCCAAAGTTTTAAATCCAGGCTCCACTTTAGAG  1094

seq1  AACCTGACCTAAGTTTGAATTC  1117
      ||||||||||||||||||||||
seq2  AACCTGACCTAAGTTTGAATTC  1116

seq1: chr1_68425851_68426962
seq2: B6Ng01-160N12.g_67_1171

seq1  GAATTCAAAAAAAAAAAACCAAAAAAAATGCTCAGAGTTTATTTCATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAAAAAAAACCAAAAAAAATGCTCAGAGTTTATTTCATGTC  50

seq1  ACAGTAAATTAAATAACTAGTTATTCAACTGAAATACTTTAAGTAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAATTAAATAACTAGTTATTCAACTGAAATACTTTAAGTAAAACA  100

seq1  CTTCTAAAGAAGAGATATTTAATGTCAATGTTGTTAAACTAGACTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAAGAAGAGATATTTAATGTCAATGTTGTTAAACTAGACTTTTTA  150

seq1  AAAGAAAAATCTAGATAAATTTATATTCTATAGTCAATGATTTAGAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATCTAGATAAATTTATATTCTATAGTCAATGATTTAGAATAT  200

seq1  CATTTATTCTCATATGATGAAGATAGATTTCAAATAGAAGTATAAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTCTCATATGATGAAGATAGATTTCAAATAGAAGTATAAAACCT  250

seq1  AGCATATTTAGTCTGCAGTCCTATGCATTCCTTCTTCAGGGATTCGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTTAGTCTGCAGTCCTATGCATTCCTTCTTCAGGGATTCGATAC  300

seq1  CTGACTTCTAGTCAATGGCTACCACTGTACACCATTTCTCTTTAGAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCTAGTCAATGGCTACCACTGTACACCATTTCTCTTTAGAACAG  350

seq1  CAGCAGGGAGGGGAATCTATTGGAAGAACTAATTTTCATCAAGTCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGAGGGGAATCTATTGGAAGAACTAATTTTCATCAAGTCAATGT  400

seq1  GGCACAAACTTCGAAGGTGTTTGTGATTTTCCATTTTGCTTAAGTGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAACTTCGAAGGTGTTTGTGATTTTCCATTTTGCTTAAGTGCCCC  450

seq1  CTGCAAATAGAAATATGTCTGGGAGAGAAATGGCAATGATAGGAATTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATAGAAATATGTCTGGGAGAGAAATGGCAATGATAGGAATTCAA  500

seq1  GGTACATATGGAAGTCAGGACAGAATAAATTAGTAAGTTACCACACTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATATGGAAGTCAGGACAGAATAAATTAGTAAGTTACCACACTGCT  550

seq1  ACCTTTCAGATCTTATACTTGAATTAAGATGGTAACTTAATTGTTGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAGATCTTATACTTGAATTAAGATGGTAACTTAATTGTTGGCCT  600

seq1  AATTTATACCCTGACCTACTTATGATCTGTAGTCAGTATAGACATTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATACCCTGACCTACTTATGATCTGTAGTCAGTATAGACATTGTAA  650

seq1  TCTCCATCAGACCATGAAGCATCAGCTGGTCTTCTACCTCTGAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCAGACCATGAAGCATCAGCTGGTCTTCTACCTCTGAAAAAAAA  700

seq1  AAGCAATGGTCCTTACTT-GGGTATTCAGTATCCTACAATACTCAGCACT  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGCAATGGTCCTTACTTGGGGTATTCAGTATCCTACAATACTCAGCACT  750

seq1  CTCCTCCATGCCACCATGGTCCTACCTACTGCTTTTCTCCATGGCATGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCATGCCACCATGGTCCTACCTACTGCTTTTCTCCATGGCATGGT  800

seq1  CCTTCCATGGGCATCTCTTACTGGTTTTATTCAAGTCTTTATGTTTGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATGGGCATCTCTTACTGGTTTTATTCAAGTCTTTATGTTTGGAT  850

seq1  GTCTAAGTCTATTATATGTAACATAATTCAGTTACCTA-TTTTAC-TTTA  897
      |||||||||||||||||||||||| ||||||||||||| |||||| ||||
seq2  GTCTAAGTCTATTATATGTAACAT-ATTCAGTTACCTATTTTTACTTTTA  899

seq1  TGATTTTTTTCTGGTAATGTTGGAGATTAATATACATCACTAATTAAAAT  947
      ||||||||||||||| ||| ||||||||| ||||||||||||||||||||
seq2  TGATTTTTTTCTGGT-ATG-TGGAGATTATTATACATCACTAATTAAAAT  947

seq1  GAGCACTAAGAAAATAATACTAATTTATAGGCATA-TTTTCAGAAGATTT  996
      ||||||||   |||||||||||||||||||||||| ||||||||||||||
seq2  GAGCACTA--GAAATAATACTAATTTATAGGCATATTTTTCAGAAGATTT  995

seq1  TGAGTTTGTAAAGCAATGCTTTGGATGCCAGAATGAACTTGAGCATGTCT  1046
      |||||||||||||| |||| ||| ||| |||||||| |||||||||||||
seq2  TGAGTTTGTAAAGC-ATGC-TTGAATG-CAGAATGACCTTGAGCATGTCT  1042

seq1  TTCAACATCTCCTCCTTGAAAGAACTAAATGGGATCTGGAAAAGTTGTAT  1096
      ||||||||| ||||||||||   ||||||| |||||||||||||||||||
seq2  TTCAACATCCCCTCCTTGAA--GACTAAAT-GGATCTGGAAAAGTTGTAT  1089

seq1  GGATTTCTGGATGAGT  1112
      ||||||||||||||||
seq2  GGATTTCTGGATGAGT  1105