BAC Information

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BAC

Clone NameB6Ng01-162C24
Chromosome1 (Build37)
Map Location 152,003,714 - 152,004,190
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712
Downstream geneLOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370, LOC668040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162C24.bB6Ng01-162C24.g
ACCDH955087DH955088
length1,219477
definitionDH955087|Mus musculus domesticus DNA, BAC clone: B6Ng01-162C24, 5' end.DH955088|Mus musculus domesticus DNA, BAC clone: B6Ng01-162C24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattatttatggagtcttatcttttcagataatgttttattttga
tatttcaaaaggatactaccagaggcatcatgttgtatttatgaaaagag
aatgtattaatggcaggagttgtagacttttggtcaagccagtttgcaag
ataacattaaggcatgaaaaggcctttggatgacctcaggttatacaata
tagatatctacttacatcattcagggtggactttgataatcagtttccat
tttatttcttttttctttttttcttctttgttttcctcttttttttcttt
tctttaaaaaaataatctatttattttgtattttttttttagacatctct
attgtatacccctgggatttcctgaaatttctatgtataccaggctgacc
tcattgtactcacagagatccatctgcctccaggtgtgtccctgtttgaa
taggtgtgacctattggaataggcgtgtcatggtgggtgtgggcttaagg
ccctcatcctagctgcctggaggtcagtattctgttagcagccttcagat
gataacatgtctgcctggatgctgccatgttcctgccttgatgatactgg
actgaacctctgaacctgtaaaccagctccaattaaatgtcatccttata
aaaatatttaatattaaaatgaaatcctattagactgtaatatttatctt
tattattacaaattagcaggtagttaaatatctaacaaaatagtctctag
ccaagttcctaatattgtttccttctgaaacttctagtgttaggcctcca
taatcagcatggctttagcactactgtcttccagatttctaccaggaaag
cccattaacctttgcagacagcattcaaccactttcgttattagctcaaa
gtttaaagtcttccagtctccttcagaaacaggcaaacacatctaatacc
ccactcctggtaccaacttctgtattagtacttttatggctgtattaata
aatatgaccaaagcactaaagaggaaggttatttgggatatgggttcaga
agggataagagtcataatggaatatcatggctcccagcaggaacacatcg
tggcaagaaaagctggagatttacatctggacctagcagggagctggaag
tacagtgattgcatgaggcttgacctaggctctcccatggacatactctc
tctagcaaggcgatactac
cattattaagacacaaattaagtttgtcttaagtcttgaaatggagtaag
accgaggatgaagtagagtcagaattggggtacagacgaggcagaattag
aaatgggaggagggactgctcatggatcatgaatggctagggatgggctc
agaggaagctagcacatgtataaatgcacactaaactattactcatgtga
ttcagccaaatggaatcttatattcaaagaacattaggaaatgcataggc
agaggcagaatatcctctaagactctccagactaagttcaaggttagtct
ggtctatgtagacagttccagcacagttgtggctacatagagatatcctg
caatatatattattatatatattgtattatatgtaacatatataatatat
attattatatgtattatattatatgtaaaatatataatactatatatatg
tatgtatgtatatgtggagatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_152003714_152004190
seq2: B6Ng01-162C24.g_63_545

seq1  GAATTCCATTATTAAGACACAAATTAAGTTTGTCTTAAGTCTTGAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATTAAGACACAAATTAAGTTTGTCTTAAGTCTTGAAATGG  50

seq1  AGTAAGACCGAGGATGAAGTAGAGTCAGAATTGGGGTACAGACGAGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGACCGAGGATGAAGTAGAGTCAGAATTGGGGTACAGACGAGGCAG  100

seq1  AATTAGAAATGGGAGGAGGGACTGCTCATGGATCATGAATGGCTAGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAATGGGAGGAGGGACTGCTCATGGATCATGAATGGCTAGGGAT  150

seq1  GGGCTCAGAGGAAGCTAGCACATGTATAAATGCACACTAAACTATTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGAGGAAGCTAGCACATGTATAAATGCACACTAAACTATTACTC  200

seq1  ATGTGATTCAGCCAAATGGAATCTTATATTCAAAGAACATTAGGAAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTCAGCCAAATGGAATCTTATATTCAAAGAACATTAGGAAATGC  250

seq1  ATAGGCAGAGGCAGAATATCCTCTAAGACTCTCCAGACTAAGTTCAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAGAGGCAGAATATCCTCTAAGACTCTCCAGACTAAGTTCAAGGT  300

seq1  TAGTCTGGTCTATGTAGACAGTTCCAGCACAGTTGTGGCTACATAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGGTCTATGTAGACAGTTCCAGCACAGTTGTGGCTACATAGAGAT  350

seq1  ATCCTGCAATATATATTATTATATATATTGTATTATATGTAACATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCAATATATATTATTATATATATTGTATTATATGTAACATATATA  400

seq1  ATATATATTATTATATGTATTATATTATATGTAAAATATATAATACTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTATTATATGTATTATATTATATGTAAAATATATAATACTATA  450

seq1  TATATGTATGTATGTATAT------ATATATAT  477
      |||||||||||||||||||      ||||||||
seq2  TATATGTATGTATGTATATGTGGAGATATATAT  483