BAC Information

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BAC

Clone NameB6Ng01-162I16
Chromosome1 (Build37)
Map Location 147,521,336 - 147,522,526
singlet/doubletsinglet
Overlap genenone
Upstream geneRgs18, LOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162I16.bB6Ng01-162I16.g
ACCDH955356DH955357
length1,171368
definitionDH955356|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I16, 5' end.DH955357|Mus musculus domesticus DNA, BAC clone: B6Ng01-162I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatgaagagaaaaaaatcaaagttaaataaatcgaagttaag
tttgatcataaaaaaatatctagagacaaagaagacattgatatcaagat
gggaaagtatcatgcagctctgacaatcatcattagcaaagaagggatat
ctgaacttttgatgatgcatttaatgatgtgtaatttctgaactctaaca
aacaattgtgaataatcacaggcaaggaaaaggaaggtttaactcaatca
catgacaggttccaatctcctatgtgacagacatctgcttaaagcttagc
cgtggaaagctacttactcaccccacttccattgttagagtaacactgga
aatactaatagtgtctagatcagaaaactgttgtaggaactaaacggcca
agtgcgtgattaattttggttctctcctgttgccttaagaaatcacaact
gttttaacaggttaaaatattattgatttattcttttcagctttgtagga
cgaagtcaaggtaaagtggtctctgcaggctcactgctttcttctaaaat
ggctgacatcaaatgtgggaggagtttatgttctctgctataggctgaag
ggatgaatacacatccaaacccattcagattgttagcagaatcctcttca
ctgtagatggacacaccaggcttccttactaaccatctatggaggttctt
tcttagcgtctcagatggtgccttagttccttgtaggttaatttcttcta
tctcaaaatgtctatcacaggcatgttatctttctaaacccagatatctt
gtttgtttggatttttaccacttttgtggtaaaaacttacttccttcttt
tctcttcttgcctctcttctcctgtttatttttattgtaatgcactttta
gttgaaatacataataaatatgtgatgaacatttatgtatgtcatacata
tatgtatatatacacacatttacacaaacacatacacataaacaaatgtg
ggcatacacacatgtttgtaaattaaaatactagctagtatacttttata
tagtttaagaattcacacagattctgggctatgtgagattgtgatcttgc
agagtaacatgtgaacactataatttttgtttacaggattcctctaatag
taacggttaaatagttactaa

aggggaaggactgaaggaactgaaaggatttgcaaccccataagaagaac
aacaatatcaaccaaccaggaccccacccccagatcccagggtctaaacc
cccaactaaagagtacacatggagggacccttggctttatctggcatcaa
tggggggtgggagggcttggtcctgtgaaggcttgatgtctcagcatagg
agaatactagggtggtgaggcaggagtaggtgggtgtgtgtgggagcacc
catatagaagcagggtttaggggagttgagataggtgtgttcagaggaga
agccagaaagggggaaacatttgaaatgcatatatataatcaataataat
acttgtttttaaatagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147521336_147522526
seq2: B6Ng01-162I16.b_49_1219 (reverse)

seq1  TTAGTAAACTATTTTTACTGTTACCTATTAGAGGATACCCTGTAAACAAA  50
      ||||| ||||| ||| || |||| ||||||||||| | ||||||||||||
seq2  TTAGT-AACTA-TTTAACCGTTA-CTATTAGAGGA-ATCCTGTAAACAAA  46

seq1  ATATTATAGTTGTTCCACATGTTACTCTGGCCAAGATCACAATTCTCAAC  100
      | ||||||| |||| ||||||||||||||  ||||||||||| |||| ||
seq2  A-ATTATAG-TGTT-CACATGTTACTCTG--CAAGATCACAA-TCTC-AC  89

seq1  ATAAGGCCCAGAATCTGTGTGAATTCTTTAAAACTATATAAAAGTATAAC  150
      |||  |||||||||||||||||||||||  ||||||||||||||||| ||
seq2  ATA--GCCCAGAATCTGTGTGAATTCTT--AAACTATATAAAAGTAT-AC  134

seq1  TAGCTAGTTATTTTTAATTTTACATACATGTGTGTATGCCCACATTTGTT  200
      ||||||| ||||||  | |||||| |||||||||||||||||||||||||
seq2  TAGCTAG-TATTTT--AATTTACAAACATGTGTGTATGCCCACATTTGTT  181

seq1  TATGTGTATGTGTTTGTGTAATTGTGTGTATATATACATATATGTATGAA  250
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  TATGTGTATGTGTTTGTGTAAATGTGTGTATATATACATATATGTATG-A  230

seq1  CATACATAAATGTTCATCACATATTTATTATGTATTTCAACTAAAAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATAAATGTTCATCACATATTTATTATGTATTTCAACTAAAAGTGC  280

seq1  ATTACAATAAAAATAAACAGGAGAAGAGAGGCAAGAAGAGAAAAGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATAAAAATAAACAGGAGAAGAGAGGCAAGAAGAGAAAAGAAGGA  330

seq1  AGTAAGTTTTTACCACAAAAGTGGTAAAAATCCAAACAAACAAGATATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTTTTACCACAAAAGTGGTAAAAATCCAAACAAACAAGATATCT  380

seq1  GGGTTTAGAAAGATAACATGCCTGTGATAGACATTTTGAGATAGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTAGAAAGATAACATGCCTGTGATAGACATTTTGAGATAGAAGAAA  430

seq1  TTAACCTACAAGGAACTAAGGCACCATCTGAGACGCTAAGAAAGAACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTACAAGGAACTAAGGCACCATCTGAGACGCTAAGAAAGAACCTC  480

seq1  CATAGATGGTTAGTAAGGAAGCCTGGTGTGTCCATCTACAGTGAAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGGTTAGTAAGGAAGCCTGGTGTGTCCATCTACAGTGAAGAGGA  530

seq1  TTCTGCTAACAATCTGAATGGGTTTGGATGTGTATTCATCCCTTCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTAACAATCTGAATGGGTTTGGATGTGTATTCATCCCTTCAGCCT  580

seq1  ATAGCAGAGAACATAAACTCCTCCCACATTTGATGTCAGCCATTTTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAGAACATAAACTCCTCCCACATTTGATGTCAGCCATTTTAGAA  630

seq1  GAAAGCAGTGAGCCTGCAGAGACCACTTTACCTTGACTTCGTCCTACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGTGAGCCTGCAGAGACCACTTTACCTTGACTTCGTCCTACAAA  680

seq1  GCTGAAAAGAATAAATCAATAATATTTTAACCTGTTAAAACAGTTGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAAGAATAAATCAATAATATTTTAACCTGTTAAAACAGTTGTGAT  730

seq1  TTCTTAAGGCAACAGGAGAGAACCAAAATTAATCACGCACTTGGCCGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGGCAACAGGAGAGAACCAAAATTAATCACGCACTTGGCCGTTT  780

seq1  AGTTCCTACAACAGTTTTCTGATCTAGACACTATTAGTATTTCCAGTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTACAACAGTTTTCTGATCTAGACACTATTAGTATTTCCAGTGTT  830

seq1  ACTCTAACAATGGAAGTGGGGTGAGTAAGTAGCTTTCCACGGCTAAGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAACAATGGAAGTGGGGTGAGTAAGTAGCTTTCCACGGCTAAGCTT  880

seq1  TAAGCAGATGTCTGTCACATAGGAGATTGGAACCTGTCATGTGATTGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGATGTCTGTCACATAGGAGATTGGAACCTGTCATGTGATTGAGT  930

seq1  TAAACCTTCCTTTTCCTTGCCTGTGATTATTCACAATTGTTTGTTAGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTCCTTTTCCTTGCCTGTGATTATTCACAATTGTTTGTTAGAGT  980

seq1  TCAGAAATTACACATCATTAAATGCATCATCAAAAGTTCAGATATCCCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTACACATCATTAAATGCATCATCAAAAGTTCAGATATCCCTT  1030

seq1  CTTTGCTAATGATGATTGTCAGAGCTGCATGATACTTTCCCATCTTGATA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAATGATGATTGTCAGAGCTGCATGATACTTTCCCATCTTGATA  1080

seq1  TCAATGTCTTCTTTGTCTCTAGATATTTTTTTATGATCAAACTTAACTTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCTTCTTTGTCTCTAGATATTTTTTTATGATCAAACTTAACTTC  1130

seq1  GATTTATTTAACTTTGATTTTTTTCTCTTCATTCTGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTAACTTTGATTTTTTTCTCTTCATTCTGAATTC  1171


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