BAC Information

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BAC

Clone NameB6Ng01-163G17
Chromosome1 (Build37)
Map Location 69,311,823 - 69,312,977
singlet/doubletsinglet
Overlap genenone
Upstream geneErbb4, LOC667842
Downstream geneEG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163G17.bB6Ng01-163G17.g
ACCDH956009DH956010
length1,152570
definitionDH956009|Mus musculus domesticus DNA, BAC clone: B6Ng01-163G17, 5' end.DH956010|Mus musculus domesticus DNA, BAC clone: B6Ng01-163G17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtcgccttcttaggagtcattctatagttgtggtgctgtta
cttaagtctggtgacacatacagtgtgttaaagtaagttgtgacaaacat
ataaaataattgctgaaatatggagcatttaagaaatttagtaagtcagt
agctaaggagacagttcaacaggtaaaggactcgatacccaaaagtgaag
actagagatgagatgcccagcatccatgtaattgtgtaatagtaatatgt
aatccatgtaatagtgacccacctacaaccccagcacttggagggcatag
gcaagtgactcctggaacaacttggctaaatgctaatgaaagaagtgagg
tctggttcaggtcatagaccctgtctcaaaacataaggtagacagtgatt
gaggaagacacctgaaatctctgacctctacatacagacatgaacacatg
cacacatgtgtgcctacatacaacacgcactttagacatacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacact
atttcagtatacatgcaagcacatacaaattaattaaaattagaggctat
ttagggagtggtattatgtaacacttttccataaggttaaagaaaacctt
ccatcttagaaacaagcttcttcaggcagtaagcaaaaggaaaatgaacc
agcagaatattttagaataggatgtttaaagaggtgaaacaacagaatgt
ttcaggaatgttggtgggcggagtacatcatcctgcaagaaagcttcacc
tagaaaggaagtaaacaattcaaaatagcttcaggaagtccctgaaactg
accagattcattaaactgctccctccttgagaatacagaaacaggaaaga
ctgctgagaatcactcttagacagaacaagctgctgaggaggctccgtga
caagtccagcaacctgaaaatgcaggaccagtcagcccaattcatcactg
gaaacggcaccctccaatcttctgagctacctgcaggcttgtgatgtggt
gctacaaggtcccatatttgtggagctgtcacccatgatggagttggcct
tttggcgaagcatctctctttagtagtttctgctcctttaatttctctct
ac

tttgttcagctctgagccccatcttttaagggggctatttgattttctgg
agtccaccctcttgagttctttatatatattggatattagtcccctattt
gatttaagataggtaaagatcctttcccaatctgttggtggtctttttgt
cttattgacggtgtcttttgccttgcagaagctttgcagtttcatgaggt
cccatttgtcaatcctcgatcttaaagcacaagccattgctgttctattc
aggaattttttccctgtgcccatatctttgagactttaagagttctcttt
ggtggctttctgtttaggttgttagggttttgcgggattgaggtggggga
aggtgttgtcacagaagccttcaatgtccctttttctcaactatgagcat
gcagtcatcaataccatgccaaaagtagctaccttgtccgctacagtcag
tgggagcatagatcctggacttaacatgtggtgtggatcacagacttcca
cactgtctctcagaccatggacatgaacacagtcctctcctgctacaggg
ggtatgggcactatcatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69311823_69312977
seq2: B6Ng01-163G17.b_42_1193

seq1  GAATTCATTGTCGCCTTCTTAGGAGTCATTCTATAGTTGTGGTGCTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCGCCTTCTTAGGAGTCATTCTATAGTTGTGGTGCTGTTA  50

seq1  CTTAAGTCTGGTGACACATACAGTGTGTTAAAGTAAGTTGTGACAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTCTGGTGACACATACAGTGTGTTAAAGTAAGTTGTGACAAACAT  100

seq1  ATAAAATAATTGCTGAAATATGGAGCATTTAAGAAATTTAGTAAGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAATTGCTGAAATATGGAGCATTTAAGAAATTTAGTAAGTCAGT  150

seq1  AGCTAAGGAGACAGTTCAACAGGTAAAGGACTCGATACCCAAAAGTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGAGACAGTTCAACAGGTAAAGGACTCGATACCCAAAAGTGAAG  200

seq1  ACTAGAGATGAGATGCCCAGCATCCATGTAATTGTGTAATAGTAATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGATGAGATGCCCAGCATCCATGTAATTGTGTAATAGTAATATGT  250

seq1  AATCCATGTAATAGTGACCCACCTACAACCCCAGCACTTGGAGGGCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGTAATAGTGACCCACCTACAACCCCAGCACTTGGAGGGCATAG  300

seq1  GCAAGTGACTCCTGGAACAACTTGGCTAAATGCTAATGAAAGAAGTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGACTCCTGGAACAACTTGGCTAAATGCTAATGAAAGAAGTGAGG  350

seq1  TCTGGTTCAGGTCATAGACCCTGTCTCAAAACATAAGGTAGACAGTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCAGGTCATAGACCCTGTCTCAAAACATAAGGTAGACAGTGATT  400

seq1  GAGGAAGACACCTGAAATCTCTGACCTCTACATACAGACATGAACACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGACACCTGAAATCTCTGACCTCTACATACAGACATGAACACATG  450

seq1  CACACATGTGTGCCTACATACAACACGCACTTTAGACATACACACACACA  500
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CACACATGTGTGCCTACATACAACACGCACTTTAGACAT--ACACACACA  498

seq1  CACACACACACACACACACACACACACACACACACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACACA  548

seq1  CTATTTCAGTATACATGCAAGCACATACAAATTAATTAAAATTAGAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCAGTATACATGCAAGCACATACAAATTAATTAAAATTAGAGGCT  598

seq1  ATTTAGGGAGTGGTATTATGTAACACTTTTCCATAAGGTTAAAGAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGAGTGGTATTATGTAACACTTTTCCATAAGGTTAAAGAAAACC  648

seq1  TTCCATCTTAGAAACAAGCTTCTTCAGGCAGTAAGCAAAAGGAAAATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTAGAAACAAGCTTCTTCAGGCAGTAAGCAAAAGGAAAATGAA  698

seq1  CCAGCAGAATATTTTAGAATAGGATGTTTAAAGAGGTGAAACAACAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGAATATTTTAGAATAGGATGTTTAAAGAGGTGAAACAACAGAAT  748

seq1  GTTTCAGGAATGTTGGTGGGCGGAGTACATCATCCTGCAAGAAAGCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGAATGTTGGTGGGCGGAGTACATCATCCTGCAAGAAAGCTTCA  798

seq1  CCTAGAAAGGAAGTAAACAATTCAAAATAGCTTCAGGAAGTCCCTGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAAGGAAGTAAACAATTCAAAATAGCTTCAGGAAGTCCCTGAAAC  848

seq1  TGACCAGATTCATTAAACTGCTCCCTCCTTGAGAATACAGAAACAGGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGATTCATTAAACTGCTCCCTCCTTGAGAATACAGAAACAGGAAA  898

seq1  GACTGCTGAGAATCACTCTTAGACAGAACAAGCTGCTGAGGAGGCTCCGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTGAGAATCACTCTTAGACAGAACAAGCTGCTGAGGAGGCTCCGT  948

seq1  GACAAGTCCAGCAACCTGAAAAAGGCAGGGACCAGTCAGCCCAATTCAAC  1000
      |||||||||||||||||| |||| ||| |||||||||||||||||||| |
seq2  GACAAGTCCAGCAACCTG-AAAATGCA-GGACCAGTCAGCCCAATTCATC  996

seq1  CACCTGGAAACGGCACCCTCCAATCTTCTGAGCTACCTGCAGGC-TGTGA  1049
         ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  --ACTGGAAACGGCACCCTCCAATCTTCTGAGCTACCTGCAGGCTTGTGA  1044

seq1  TGT-GTGCTACAGGTCCCCATATTTGT-GAGCTGTCACCCATGATGGAGT  1097
      ||| |||||||| |  ||||||||||| ||||||||||||||||||||||
seq2  TGTGGTGCTACAAGGTCCCATATTTGTGGAGCTGTCACCCATGATGGAGT  1094

seq1  GGGC--TTTGGCGAAGCATCTCTCTTTTAGTAGTTTCTGCTCCTATAAAT  1145
       |||  |||||||||||||||||| ||||||||||||||||||| | |||
seq2  TGGCCTTTTGGCGAAGCATCTCTC-TTTAGTAGTTTCTGCTCCT-TTAAT  1142

seq1  ATCTCTCTAC  1155
       |||||||||
seq2  TTCTCTCTAC  1152


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