BAC Information

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BAC

Clone NameB6Ng01-169L23
Chromosome1 (Build37)
Map Location 98,265,072 - 98,266,159
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169L23.bB6Ng01-169L23.g
ACCDH960639DH960640
length5151,072
definitionDH960639|Mus musculus domesticus DNA, BAC clone: B6Ng01-169L23, 5' end.DH960640|Mus musculus domesticus DNA, BAC clone: B6Ng01-169L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatctggaggttcctcagaaaattggaaatagatctacctgaag
aaccagcaataccagtcttgggactatacccataagatgccctaccatgc
cacagggcgtgtgttccactatgttcatagtggccttgtttttgatagct
agcagctagaaacaacccagatgtctcacgacagaagagtagatacagaa
tatgtggttcatttacacaatgtaatgcttctcagcaattaagaatgagg
acatcctgagttttgcaggcaaatggatggaactaggaaataacatcttg
agtgagctaactcaggcccaaaaggacatgtatggtatgtactcactaat
aagtagatatgagcccctctcccccaaaaaagtacagaatacccaagaca
cagtccacagaattaaaaaaagattaacaaggtaaagggcccaagtgagg
acacctcattcccacttggtaaggagaagaaaacaatcatggggaagggg
agggagggaaagaaa

gaattcttgacccacttgaatcagaagttcatgagtttacgttgtcttaa
tgtgggcgaaactaatctaggaactagtagatatagttttgtagtataat
tctgtgcctataagtgattgtagaatgaacagtgacagtaagatttaagg
tttcagttcatatacctccttcaatttatcggcattgtgactatgggtaa
tcaattaattcatctgcagtatggaatctctaggcactgaaacgtatggc
actgtcagtactttcaactctccactgttaccggaggcttcaaatttaag
ctataagctatgtaatagcatttctcttaccccagtagaaactttcggat
tttttttttttttttgatgatagtgaatatatgtgagatctctctattca
atgagctttatatcaaataactcttgaaagctttatacctaaggggcaaa
atacatccaagcgatgattcagtctgcagcttttgatgtatttcacattg
tcactgaacacacttttagcagcatatgccaatactgaggttatattcaa
gatcttaatgcatatttatgcctcttagataaaactgagtttctgtttct
tctagaatttctagtcttcaaaatatttctggtttggtatactatgagga
tgggaaaatgtttttagcagtgacagaaattgtctttctgcaaagcaaag
gaatagggcttaaaggctgtacatatatggacacatcagggttactctaa
ttcacaatttgagaagaggcaaaaacattgttaatgttccgtaatccatt
taagtagaaactattgctttatatacagccagaagctatgcattttaata
cattgccaatctaatctaaaggactactcaaaaccagagcaattttcact
attagtcttctaagtactacaccccccagactagaattggtgaagatgcc
tattaacacaccattatacattttaccaaagatcaaagtattatgtggag
catcctgtatgagaccttttacagtcttctcaaattctatttaataagta
gaaattatggattttgtatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98265072_98266159
seq2: B6Ng01-169L23.g_67_1138 (reverse)

seq1  TACATACAAAAAATCCATATATTCTACTTTATTAAAATTAGAAATTATGA  50
      |||||||  ||||||||||  |||||| ||||||||  |||||  | |||
seq2  TACATAC--AAAATCCATAATTTCTAC-TTATTAAA--TAGAA--TTTGA  43

seq1  GAAAGACTGTTAAAAAGGTCTCATTAACAGGATGCT-CACATAATACTTT  99
      | ||||||||  ||||||||||||  |||||||||| |||||||||||||
seq2  G-AAGACTGT--AAAAGGTCTCAT--ACAGGATGCTCCACATAATACTTT  88

seq1  GATTCTTTTGGTAAAAATGTATAATGGTGTGTTAATAGGCATTCTTTCAC  149
      |||   |||||| |||||||||||||||||||||||||||||   |||||
seq2  GAT--CTTTGGT-AAAATGTATAATGGTGTGTTAATAGGCAT--CTTCAC  133

seq1  CAATTCTAGTCT-GGGGGTGTAGTACTTAGAAGACTAATAGTGAAAATTG  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAATTCTAGTCTGGGGGGTGTAGTACTTAGAAGACTAATAGTGAAAATTG  183

seq1  CTCTGGTTTTTGAGTAGTCCTTTAGATTAGATTGGCAATGTATTAAAATG  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGG-TTTTGAGTAGTCCTTTAGATTAGATTGGCAATGTATTAAAATG  232

seq1  CATAGCTTCTGGCTGTATATAAAGCAATAGTTTCTACTTAAATGGATTAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTTCTGGCTGTATATAAAGCAATAGTTTCTACTTAAATGGATTAC  282

seq1  GGAACATTAACAATGTTTTTGCCTCTTCTCAAATTGTGAATTAGAGTAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATTAACAATGTTTTTGCCTCTTCTCAAATTGTGAATTAGAGTAAC  332

seq1  CCTGATGTGTCCATATATGTACAGCCTTTAAGCCCTATTCCTTTGCTTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGTGTCCATATATGTACAGCCTTTAAGCCCTATTCCTTTGCTTTG  382

seq1  CAGAAAGACAATTTCTGTCACTGCTAAAAACATTTTCCCATCCTCATAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGACAATTTCTGTCACTGCTAAAAACATTTTCCCATCCTCATAGT  432

seq1  ATACCAAACCAGAAATATTTTGAAGACTAGAAATTCTAGAAGAAACAGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAACCAGAAATATTTTGAAGACTAGAAATTCTAGAAGAAACAGAA  482

seq1  ACTCAGTTTTATCTAAGAGGCATAAATATGCATTAAGATCTTGAATATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTTTTATCTAAGAGGCATAAATATGCATTAAGATCTTGAATATAA  532

seq1  CCTCAGTATTGGCATATGCTGCTAAAAGTGTGTTCAGTGACAATGTGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTATTGGCATATGCTGCTAAAAGTGTGTTCAGTGACAATGTGAAA  582

seq1  TACATCAAAAGCTGCAGACTGAATCATCGCTTGGATGTATTTTGCCCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAAAGCTGCAGACTGAATCATCGCTTGGATGTATTTTGCCCCTT  632

seq1  AGGTATAAAGCTTTCAAGAGTTATTTGATATAAAGCTCATTGAATAGAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAAAGCTTTCAAGAGTTATTTGATATAAAGCTCATTGAATAGAGA  682

seq1  GATCTCACATATATTCACTATCATCAAAAAAAAAAAAAAAATCCGAAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCACATATATTCACTATCATCAAAAAAAAAAAAAAAATCCGAAAGT  732

seq1  TTCTACTGGGGTAAGAGAAATGCTATTACATAGCTTATAGCTTAAATTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGGGGTAAGAGAAATGCTATTACATAGCTTATAGCTTAAATTTG  782

seq1  AAGCCTCCGGTAACAGTGGAGAGTTGAAAGTACTGACAGTGCCATACGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCCGGTAACAGTGGAGAGTTGAAAGTACTGACAGTGCCATACGTT  832

seq1  TCAGTGCCTAGAGATTCCATACTGCAGATGAATTAATTGATTACCCATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCCTAGAGATTCCATACTGCAGATGAATTAATTGATTACCCATAG  882

seq1  TCACAATGCCGATAAATTGAAGGAGGTATATGAACTGAAACCTTAAATCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGCCGATAAATTGAAGGAGGTATATGAACTGAAACCTTAAATCT  932

seq1  TACTGTCACTGTTCATTCTACAATCACTTATAGGCACAGAATTATACTAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCACTGTTCATTCTACAATCACTTATAGGCACAGAATTATACTAC  982

seq1  AAAACTATATCTACTAGTTCCTAGATTAGTTTCGCCCACATTAAGACAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATATCTACTAGTTCCTAGATTAGTTTCGCCCACATTAAGACAAC  1032

seq1  GTAAACTCATGAACTTCTGATTCAAGTGGGTCAAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTCATGAACTTCTGATTCAAGTGGGTCAAGAATTC  1072


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