BAC Information

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BAC

Clone NameB6Ng01-170N12
Chromosome1 (Build37)
Map Location 70,788,377 - 70,942,318
singlet/doubletdoublet
Overlap geneA830006F12Rik, LOC100043210
Upstream geneSpag16
Downstream geneEG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170N12.bB6Ng01-170N12.g
ACCDH961455DH961456
length5981,216
definitionDH961455|Mus musculus domesticus DNA, BAC clone: B6Ng01-170N12, 5' end.DH961456|Mus musculus domesticus DNA, BAC clone: B6Ng01-170N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,941,748 - 70,942,318)(70,788,377 - 70,789,586)
sequence
ctaacatatgcgtcttttcaaataaaggttatgaaacaggcagtgagtac
aaccattatgttaattataacctgatggagacacatcaaagcaaaatgtg
aaaattttaagatagagaacaccagtttatgggaaccagttaaaatccca
ggattgtatgatttattgctgtcatacataataataagtgctataaatat
gcttgatgtattagacatgtaaatttatgtgtagattattactaataact
aatgactgtcagatcaagtcattcacagtctccatagtgaaccccattcc
aattttggaatctctctcataagaaagaaatttcttaagaaaaatgcact
gagctagagagatggctcagtgattgaagaacttgatgccaagtgtggga
acaggggtttcagatgcacagaagttacacacaatggcaggtgaatatga
taacctgattgcaattctagcctcaaaagtggagacagggcatctccata
tcaagctttctggtaagactaaccatataggtatggccctatctcagtga
atgaagtggacaggtcattgcggataattcctaacatctaccttatat
gaattctctgtaacaaaatctaaaagaaacagagctgagagcatttgagt
gtcacatgaatgtatacacatgcatgcatatatgaatatacacagcgaaa
gagatagagatagagatagaaataggtatgtttcctttattgttgtctat
tcaattacaagtcattgattgcatctttagtcccatatctttttcagaaa
atgcaacacattggctacatgaggcaaattgtttccttattcacaatttt
tcagggctgagttggtttcattttaaaattctcatcatcaagacatatac
aggtataccaaaggcacatcctcatccattgaaacacaaactgcacccta
agggttaacagtgggatagcccactgagggttagcagtgggttagcccac
tgagggttagcagtgggttagcccactgaaggttaactgtgattactttt
gcaaattttgatgtcttattttttatatatacatcagagctaatgagatg
gtccagaatgtaaggcacttgccaagcaactatgaggtcataagttcaat
tcctcagaacctatatcaaagctgggtgcattagcatgcatctctaatcc
tggaactcctaaagtgagataggtagtggagaccagaaaaattagggcaa
tgaggcgagcctgacatacaagagcaagagaccctgattcaaataaggta
gacgatgaagacaaagtcttgatgctgtcctctgacatccacacacgtgt
gcacatacacaaatgcaggcacattatatacaggtgtcatgcacacagag
gtatgaaaaataaaatatcaacaacaatgaataacttctctgaactcccc
ttatattcatttaatactgggctccatgctccttctcctaagtatgacaa
gggaaattagaattgttcagtctttactttaattttctttccagcattaa
aaataaactctcatgctaaatagcaaacttttgactgctgagatttagaa
agcttctttaaagaaaaaagggatgttgaggaattttcttttagtatgga
gtcttctaggacattcgctataatgctggaaagagaaggaaaatcagact
tcgataatcaatggatcaaagctatctctctcttttcaaatttctgtgtt
ttttatgaaaagtcatagaaggatggaagtttcctttgtaaaataagaat
ttattgaactgtctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70941748_70942318
seq2: B6Ng01-170N12.b_26_598 (reverse)

seq1  ATATAAGGTAGATGTTAGGAATTATCCGCAATGACCTGTCCACTTCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGTAGATGTTAGGAATTATCCGCAATGACCTGTCCACTTCATTC  50

seq1  ACTGAGATAGGGCCATACCTATATGGTTAGTCTTACCAGAAAGCTTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACTGAGATAGGGCCATACCTATATGGTTAGTCTTACCAGAAAGCTTGATA  100

seq1  TGGAGATGCCCTGTCTCCACTTTTGAGGCTAGAATTGCAATCAGGTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGCCCTGTCTCCACTTTTGAGGCTAGAATTGCAATCAGGTTATC  150

seq1  ATATTCACCTGCCATTGTGTGTAACTTCTGTGCATCTGAAACCCCTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACCTGCCATTGTGTGTAACTTCTGTGCATCTGAAACCCCTGTTC  200

seq1  CCACACTTGGCATCAAGTTCTTCAATCACTGAGCCATCTCTCTAGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTGGCATCAAGTTCTTCAATCACTGAGCCATCTCTCTAGCTCAG  250

seq1  TGCATTTTTCTTAAGAAATTTCTTTCTTATGAGAGAGATTCCAAAATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTTCTTAAGAAATTTCTTTCTTATGAGAGAGATTCCAAAATTGG  300

seq1  AATGGGGTTCACTATGGAGACTGTGAATGACTTGATCTGACAGTCATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTTCACTATGGAGACTGTGAATGACTTGATCTGACAGTCATTAG  350

seq1  TTATTAGTAATAATCTACACATAAATTTACATGTCTAATACATCAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTAATAATCTACACATAAATTTACATGTCTAATACATCAAGCAT  400

seq1  ATTTATAGCACTTATTATTATGTATGACAGCAATAAATCATACAATCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGCACTTATTATTATGTATGACAGCAATAAATCATACAATCCTG  450

seq1  GGATTTTAACTGGTTCCCATAAACTGGTGTTCTCTATCTTAAAATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAACTGGTTCCCATAAACTGGTGTTCTCTATCTTAAAATTTTCA  500

seq1  CATTTTGCTTTGATGTGTCTCCATCAGG-AATTGTTAACATAATGGTTGT  549
      ||||||||||||||||||||||||||||  ||  ||||||||||||||||
seq2  CATTTTGCTTTGATGTGTCTCCATCAGGTTATAATTAACATAATGGTTGT  550

seq1  ACTCACTGCCTGTTTC-TAACCT  571
      |||||||||||||||| ||||||
seq2  ACTCACTGCCTGTTTCATAACCT  573

seq1: chr1_70788377_70789586
seq2: B6Ng01-170N12.g_70_1285

seq1  GAATTCTCTGTAACAAAATCTAAAAGAAACAGAGCTGAGAGCATTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAACAAAATCTAAAAGAAACAGAGCTGAGAGCATTTGAGT  50

seq1  GTCACATGAATGTATACACATGCATGCATATATGAATATACACAGCGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGAATGTATACACATGCATGCATATATGAATATACACAGCGAAA  100

seq1  GAGATAGAGATAGAGATAGAAATAGGTATGTTTCCTTTATTGTTGTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGAGATAGAGATAGAAATAGGTATGTTTCCTTTATTGTTGTCTAT  150

seq1  TCAATTACAAGTCATTGATTGCATCTTTAGTCCCATATCTTTTTCAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACAAGTCATTGATTGCATCTTTAGTCCCATATCTTTTTCAGAAA  200

seq1  ATGCAACACATTGGCTACATGAGGCAAATTGTTTCCTTATTCACAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACACATTGGCTACATGAGGCAAATTGTTTCCTTATTCACAATTTT  250

seq1  TCAGGGCTGAGTTGGTTTCATTTTAAAATTCTCATCATCAAGACATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCTGAGTTGGTTTCATTTTAAAATTCTCATCATCAAGACATATAC  300

seq1  AGGTATACCAAAGGCACATCCTCATCCATTGAAACACAAACTGCACCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACCAAAGGCACATCCTCATCCATTGAAACACAAACTGCACCCTA  350

seq1  AGGGTTAACAGTGGGATAGCCCACTGAGGGTTAGCAGTGGGTTAGCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAACAGTGGGATAGCCCACTGAGGGTTAGCAGTGGGTTAGCCCAC  400

seq1  TGAGGGTTAGCAGTGGGTTAGCCCACTGAAGGTTAACTGTGATTACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTAGCAGTGGGTTAGCCCACTGAAGGTTAACTGTGATTACTTTT  450

seq1  GCAAATTTTGATGTCTTATTTTTTATATATACATCAGAGCTAATGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTGATGTCTTATTTTTTATATATACATCAGAGCTAATGAGATG  500

seq1  GTCCAGAATGTAAGGCACTTGCCAAGCAACTATGAGGTCATAAGTTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAATGTAAGGCACTTGCCAAGCAACTATGAGGTCATAAGTTCAAT  550

seq1  TCCTCAGAACCTATATCAAAGCTGGGTGCATTAGCATGCATCTCTAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGAACCTATATCAAAGCTGGGTGCATTAGCATGCATCTCTAATCC  600

seq1  TGGAACTCCTAAAGTGAGATAGGTAGTGGAGACCAGAAAAATTAGGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCCTAAAGTGAGATAGGTAGTGGAGACCAGAAAAATTAGGGCAA  650

seq1  TGAGGCGAGCCTGACATACAAGAGCAAGAGACCCTGATTCAAATAAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCGAGCCTGACATACAAGAGCAAGAGACCCTGATTCAAATAAGGTA  700

seq1  GACGATGAAGACAAAGTCTTGATGCTGTCCTCTGACATCCACACACGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATGAAGACAAAGTCTTGATGCTGTCCTCTGACATCCACACACGTGT  750

seq1  GCACATACACAAATGCAGGCACATTATATACAGGTGTCATGCACACAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACACAAATGCAGGCACATTATATACAGGTGTCATGCACACAGAG  800

seq1  GTATGAAAAATAAAATATCAACAACAATGAATAACTTCTCTGAAACTCCC  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTATGAAAAATAAAATATCAACAACAATGAATAACTTCTCTG-AACTCCC  849

seq1  CTTATATTCATTTAATACTGGCTCCCATGCTCCTTCTCCTAAGTATGAC-  899
      |||||||||||||||||||||   ||||||||||||||||||||||||| 
seq2  CTTATATTCATTTAATACTGGGCTCCATGCTCCTTCTCCTAAGTATGACA  899

seq1  AGGGAAATTAGAATTGTTCAGTC-TTACTTTAATTTTC-CTCCAGCATTA  947
      ||||||||||||||||||||||| ||||||||||||||  ||||||||||
seq2  AGGGAAATTAGAATTGTTCAGTCTTTACTTTAATTTTCTTTCCAGCATTA  949

seq1  AAAATAAA--CCCATGCTAAAATAGCAAACCTTTGACTGCTGAGATTTAG  995
      ||||||||  | |||||| ||||||||||| |||||||||||||||||||
seq2  AAAATAAACTCTCATGCT-AAATAGCAAACTTTTGACTGCTGAGATTTAG  998

seq1  AAAGCTTCATTAAGGAGAAAAGGGACAATCATGAGGAATATTCCTTTTGT  1045
      |||||||| |||| || |||||||   ||  |||||||| || |||||  
seq2  AAAGCTTCTTTAAAGAAAAAAGGG---ATGTTGAGGAAT-TTTCTTTTAG  1044

seq1  TAATGAG-CCTCTAGGACATCCGCATTAACGCTGG-AAGAG-AGGAAAAT  1092
      ||  ||| | |||||||||| |||  ||| ||||| ||||| ||||||||
seq2  TATGGAGTCTTCTAGGACATTCGCTATAATGCTGGAAAGAGAAGGAAAAT  1094

seq1  CAAGACTCCGATAA-CCATGAACCAAAGCTATCTCTC-CTTTTCAAAATT  1140
      | ||||| |||||| | ||| | |||||||||||||| ||||||||| ||
seq2  C-AGACTTCGATAATCAATGGATCAAAGCTATCTCTCTCTTTTCAAATTT  1143

seq1  CTG---TTTTTATGAAGAAGCCAATGAAAGATTGAAGTTTCTTTAGT-AA  1186
      |||   |||||||||| ||| ||  ||| ||| |||||||| || || ||
seq2  CTGTGTTTTTTATGAA-AAGTCATAGAAGGATGGAAGTTTCCTTTGTAAA  1192

seq1  ATAAGAATTTAATGAACTGTCTAA  1210
      ||||||||||| ||||||||||||
seq2  ATAAGAATTTATTGAACTGTCTAA  1216