BAC Information

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BAC

Clone NameB6Ng01-172C22
Chromosome1 (Build37)
Map Location 80,112,344 - 80,113,095
singlet/doubletsinglet
Overlap genenone
Upstream geneScg2, Ap1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325
Downstream geneA830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10, LOC665092, 9430031J16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172C22.bB6Ng01-172C22.g
ACCGA000868GA000869
length966777
definitionB6Ng01-172C22.b B6Ng01-172C22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacgtaatggctgagaagcacctaaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacag
cagatcgtggtgaggatgtggaggaagagaaacactcctccattgctggt
gggattgcaagctgctacaaccactctggaaatcagttggcagttcctga
gaaaattggacatagtactaccggaagatccagcaataccactcctggac
atatacccagaagatgttccaaccggtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactaagcagctatttaaaaaaatgaatgtatgaaattcttaaacaa
atggatggatctgggcacctttcatctggggtcaggaagcagagagtgtg
ggcaggatgctcaactggttttctctttgtcagctgaccagtacctgccc
acttttatatccaccctgcaagatagtccctcacaggcatgtctagaggc
ttggttcctaggaattcaaaccctaacatgctgacatattaactgtcaca
taagcattcataacctgtaagtggggactgtgaacattatgagttacaat
ttacagtcttaaaatcataacaagggacaaagtctctgttgcctaaatgc
tagaatttggggatttaaaaggttaaaaatagagactggagagatggccc
cgtggctaacagagcttgttgttcatccaggggacacatgtttgggttcc
cagcgcccacactgggcagttctcaactgcctgtatctctgtcttcgtgg
ggtctgattccttctt
gaattcaagccctggtctacatagaaagacctcatctcaacaaacaaagt
tagtaattattttatgtgtctcagaaggcaacttccctttaatagaccct
ttcttgtgtttaaacttctcaatcctaaatttcagtcgtacaaatattga
gctttgaaatcacatcatcaaagtgtgtttgtcgaggtcaccactgccta
tcagcaaggctgacaccctagtcagcagtaggtgctgatgttgctgccgc
ccctgctgtaattaatgtcacattgatctctttgagatttttcacccttc
tttgtagggactgttttattccactggaggattgtgtaaacccaagtgtt
gccatggcaatactgcagtcccagtaaaatctgtgattctctaggacaga
ctccttcttatacctgaatgccacacactaccaaaccctgtgaactgaag
tcagtgttagaaggtcccagacatttaagaatcccatcctttgctgaagg
ggtttgcagccctataggaggaacaacaatatgaactaaccagtaccccc
agagctccccaagactaaaccaccaatcaaagaaaacccatggtgggact
cgtggctctagctgcatatgtagcagaggatggcctagttggtcatcaat
gggaggagagtcccttggtgttgcgaagattctatgccccagtatagggg
aatgccagggccaggaagcgggagcaggtgggttggggagcagggggagg
agcgtcttattaatagtcaaaacacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80112344_80113095
seq2: B6Ng01-172C22.g_66_817

seq1  GAATTCAAGCCCTGGTCTACATAGAAAGACCTCATCTCAACAAACAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCCTGGTCTACATAGAAAGACCTCATCTCAACAAACAAAGT  50

seq1  TAGTAATTATTTTATGTGTCTCAGAAGGCAACTTCCCTTTAATAGACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTATTTTATGTGTCTCAGAAGGCAACTTCCCTTTAATAGACCCT  100

seq1  TTCTTGTGTTTAAACTTCTCAATCCTAAATTTCAGTCGTACAAATATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTTTAAACTTCTCAATCCTAAATTTCAGTCGTACAAATATTGA  150

seq1  GCTTTGAAATCACATCATCAAAGTGTGTTTGTCGAGGTCACCACTGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAATCACATCATCAAAGTGTGTTTGTCGAGGTCACCACTGCCTA  200

seq1  TCAGCAAGGCTGACACCCTAGTCAGCAGTAGGTGCTGATGTTGCTGCCGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAGGCTGACACCCTAGTCAGCAGTAGGTGCTGATGTTGCTGCCGC  250

seq1  CCCTGCTGTAATTAATGTCACATTGATCTCTTTGAGATTTTTCACCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGTAATTAATGTCACATTGATCTCTTTGAGATTTTTCACCCTTC  300

seq1  TTTGTAGGGACTGTTTTATTCCACTGGAGGATTGTGTAAACCCAAGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGGACTGTTTTATTCCACTGGAGGATTGTGTAAACCCAAGTGTT  350

seq1  GCCATGGCAATACTGCAGTCCCAGTAAAATCTGTGATTCTCTAGGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCAATACTGCAGTCCCAGTAAAATCTGTGATTCTCTAGGACAGA  400

seq1  CTCCTTCTTATACCTGAATGCCACACACTACCAAACCCTGTGAACTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTTATACCTGAATGCCACACACTACCAAACCCTGTGAACTGAAG  450

seq1  TCAGTGTTAGAAGGTCCCAGACATTTAAGAATCCCATCCTTTGCTGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTAGAAGGTCCCAGACATTTAAGAATCCCATCCTTTGCTGAAGG  500

seq1  GGTTTGCAGCCCTATAGGAGGAACAACAATATGAACTAACCAGTACCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCAGCCCTATAGGAGGAACAACAATATGAACTAACCAGTACCCCC  550

seq1  AGAGCTCCCCAAGACTAAACCACCAATCAAAGAAAACCCATGGTGGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCCCAAGACTAAACCACCAATCAAAGAAAACCCATGGTGGGACT  600

seq1  CGTGGCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAAT  650

seq1  GGGAGGAGAGTCCCTTGGTGTTGCGAAGATTCTATGCCCCAGTATAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGAGTCCCTTGGTGTTGCGAAGATTCTATGCCCCAGTATAGGGG  700

seq1  AATGCCAGGGCCAGGAAGCGGGAGCAGGTGGGTTGGGGAGCAGGGGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGGGCCAGGAAGCGGGAGCAGGTGGGTTGGGGAGCAGGGGGAGG  750

seq1  AG  752
      ||
seq2  AG  752