BAC Information

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BAC

Clone NameB6Ng01-173F03
Chromosome1 (Build37)
Map Location 148,710,320 - 148,815,189
singlet/doubletdoublet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173F03.bB6Ng01-173F03.g
ACCGA001696GA001697
length9131,146
definitionB6Ng01-173F03.b B6Ng01-173F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,710,320 - 148,710,976)(148,814,038 - 148,815,189)
sequence
gaattctcacgttgactgcgaacatgagttaccatgctaaatggtgtgta
gttgtgttacaatctaccacatttaatgttgactcttgtatatgtcatag
ttgaacttactattttttcccggatgtaaaatttgtctttatctgtgaaa
ttgtgactttttttaaaatttttttattaggtatttagctcatttacatt
tccaatgctataccaaaagtcccccatacccacccacccccactccccta
cccacccactccccctttttggccctggcgttcccctgtactggggcata
taaattttgatgtccaatgggcctctctttccagtgatggccgactaggc
catcttttgatacatatgcacctagagtaaagagctccggggtactggtt
atttcataatgttgttccacctatagggttgcagttccctttagctcctt
gggtactttctctagctcctccattgggagccctgtgatccatccattag
ctgactgtgagcatccacttctgtgtttgctaggccccggcatagtctca
caagagacagctacatctgggtcctttcgataaaatcttgctagtgtatg
caatggtgtcagcgtttggatgctgattatggggtggatccctggatatg
gcagtctctacatggtccatcctttcatctcagctccaaactttgtctct
gtaactcctttccaagggtgttttgttcccacttctaaggaggggcatag
tgtccacacttcagtcttcatttttcttgagtttcatgtgtttagggaaa
ttgtatcttatatcttgggtatcctaggttttgggctaatatccacttta
tcagtgagtacatattgtgtgatttcctttgtgaatgtgttacctcactc
aggatgatgccct
gaattctctcactctctgcatgaatttatgtggaaatgaaacctgtctat
atgttcatggtagttaatcaacacaggatgattattttagatattcaata
cttaagtagctaaaataaaaacagcatgggcaaaatatatttaacacaga
taggaactcagaaatcctctttaaaaggattaatttaattgattttataa
gtgagtgttttgcctgcatgtctatacatgtctggtaacttcagagtatt
aaaaaagggactggatttacctgagctggaaagagtgatgattctatctc
accatgtgggtgatggaaccaatgcagttcctgttccattgtagacagtt
cttttatccactgagtcatctcttccatcccatataattattttatacag
tattgcagttagatgtgacaaggaagttgtaatgatgtttcacaatgacc
aattttcaataaaaataatactgaccaccagataagacacttttagttga
agaagttaaaagacctgaaataaaatcaacattgaatgcaagctataatg
tctcaatatagcaagaatatgaattttgattgtgtactatgaatcatgtt
cacaacccttggattatttgtttgtcttagacatattaggcagcattgtt
tcattgaagaagtaaggatggagttacatagatttgagtaaaaacttaga
ttaaaaacaaacaaaaggatctccagaagaatggtaaactatatctttcc
tgtgcaagttcttggctttcagtaatcacagaataacttgaaatgcgagg
gaaatgaaagaaagagaaaaaaatgaaaaataacaaaaagaaaacaaaac
aaaaagaacacagagaagctaatggagttatatacatgcagaccacagaa
caatatttttctatttttatagtattctatattataactaactcaggaca
agtcagtatgctatctgttgcatgtacatagaagtagaagacttgtatga
tcaaatattttttgtcattattagagagtgtcaccaggctaaatttagag
gtaacagaaaatactttttttttaaaaaatcagtttctattggttctatt
gctgtgataaacctcagacaagagcacttgaaagagaaaaaatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148710320_148710976
seq2: B6Ng01-173F03.b_46_702

seq1  GAATTCTCACGTTGACTGCGAACATGAGTTACCATGCTAAATGGTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACGTTGACTGCGAACATGAGTTACCATGCTAAATGGTGTGTA  50

seq1  GTTGTGTTACAATCTACCACATTTAATGTTGACTCTTGTATATGTCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTACAATCTACCACATTTAATGTTGACTCTTGTATATGTCATAG  100

seq1  TTGAACTTACTATTTTTTCCCGGATGTAAAATTTGTCTTTATCTGTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTACTATTTTTTCCCGGATGTAAAATTTGTCTTTATCTGTGAAA  150

seq1  TTGTGACTTTTTTTAAAATTTTTTTATTAGGTATTTAGCTCATTTACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTTTTTTTAAAATTTTTTTATTAGGTATTTAGCTCATTTACATT  200

seq1  TCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTA  250

seq1  CCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATA  300

seq1  TAAATTTTGATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTGATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC  350

seq1  CATCTTTTGATACATATGCACCTAGAGTAAAGAGCTCCGGGGTACTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTGATACATATGCACCTAGAGTAAAGAGCTCCGGGGTACTGGTT  400

seq1  ATTTCATAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTT  450

seq1  GGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAG  500

seq1  CTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCA  550

seq1  CAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATG  600

seq1  CAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATG  650

seq1  GCAGTCT  657
      |||||||
seq2  GCAGTCT  657

seq1: chr1_148814038_148815189
seq2: B6Ng01-173F03.g_67_1212 (reverse)

seq1  TACATATTTTTCTC-TTCAAGTTGCTCTTGGTCCTGAGGTTTATCACAGC  49
      ||||| |||||||| |||||| ||||||||   |||||||||||||||||
seq2  TACAT-TTTTTCTCTTTCAAG-TGCTCTTG--TCTGAGGTTTATCACAGC  46

seq1  AATAGAAACCATAGAAACTGATTTTTTTAAAAAAAAAAGTATTTTCTGTT  99
      ||||||| | |||||||||||||||||  |||||||||||||||||||||
seq2  AATAGAACCAATAGAAACTGATTTTTT--AAAAAAAAAGTATTTTCTGTT  94

seq1  ACCTCTAAATTTAGCCTTGGTGACACTCTCTAATTAATTGAC-AAAAATA  148
      |||||||||||||||| |||||||||||||||||  | |||| |||||||
seq2  ACCTCTAAATTTAGCC-TGGTGACACTCTCTAAT--AATGACAAAAAATA  141

seq1  TTTGATCATACAAGTCTTCTACTTCTATGTACATGCAACAGATAGCATAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATACAAGTCTTCTACTTCTATGTACATGCAACAGATAGCATAC  191

seq1  TGACTTGTCCTGAGTTAGTTATAATATAGAATACTAT-AAAATAGAAAAA  247
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGACTTGTCCTGAGTTAGTTATAATATAGAATACTATAAAAATAGAAAAA  241

seq1  TATTGTTCTGTGGTCTGCATGTATATAACTCCATTAGCTTCTCTGTGTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCTGTGGTCTGCATGTATATAACTCCATTAGCTTCTCTGTGTTC  291

seq1  TTTTTGTTTTGTTTTCTTTTTGTTATTTTTCATTTTTTTCTCTTTCTTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGTTTTCTTTTTGTTATTTTTCATTTTTTTCTCTTTCTTTC  341

seq1  ATTTCCCTCGCATTTCAAGTTATTCTGTGATTACTGAAAGCCAAGAACTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTCGCATTTCAAGTTATTCTGTGATTACTGAAAGCCAAGAACTT  391

seq1  GCACAGGAAAGATATAGTTTACCATTCTTCTGGAGATCCTTTTGTTTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGAAAGATATAGTTTACCATTCTTCTGGAGATCCTTTTGTTTGTT  441

seq1  TTTAATCTAAGTTTTTACTCAAATCTATGTAACTCCATCCTTACTTCTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTAAGTTTTTACTCAAATCTATGTAACTCCATCCTTACTTCTTC  491

seq1  AATGAAACAATGCTGCCTAATATGTCTAAGACAAACAAATAATCCAAGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACAATGCTGCCTAATATGTCTAAGACAAACAAATAATCCAAGGG  541

seq1  TTGTGAACATGATTCATAGTACACAATCAAAATTCATATTCTTGCTATAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACATGATTCATAGTACACAATCAAAATTCATATTCTTGCTATAT  591

seq1  TGAGACATTATAGCTTGCATTCAATGTTGATTTTATTTCAGGTCTTTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATTATAGCTTGCATTCAATGTTGATTTTATTTCAGGTCTTTTAA  641

seq1  CTTCTTCAACTAAAAGTGTCTTATCTGGTGGTCAGTATTATTTTTATTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAACTAAAAGTGTCTTATCTGGTGGTCAGTATTATTTTTATTGA  691

seq1  AAATTGGTCATTGTGAAACATCATTACAACTTCCTTGTCACATCTAACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTCATTGTGAAACATCATTACAACTTCCTTGTCACATCTAACTG  741

seq1  CAATACTGTATAAAATAATTATATGGGATGGAAGAGATGACTCAGTGGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTGTATAAAATAATTATATGGGATGGAAGAGATGACTCAGTGGAT  791

seq1  AAAAGAACTGTCTACAATGGAACAGGAACTGCATTGGTTCCATCACCCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACTGTCTACAATGGAACAGGAACTGCATTGGTTCCATCACCCAC  841

seq1  ATGGTGAGATAGAATCATCACTCTTTCCAGCTCAGGTAAATCCAGTCCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGATAGAATCATCACTCTTTCCAGCTCAGGTAAATCCAGTCCCT  891

seq1  TTTTTAATACTCTGAAGTTACCAGACATGTATAGACATGCAGGCAAAACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATACTCTGAAGTTACCAGACATGTATAGACATGCAGGCAAAACA  941

seq1  CTCACTTATAAAATCAATTAAATTAATCCTTTTAAAGAGGATTTCTGAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTATAAAATCAATTAAATTAATCCTTTTAAAGAGGATTTCTGAGT  991

seq1  TCCTATCTGTGTTAAATATATTTTGCCCATGCTGTTTTTATTTTAGCTAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCTGTGTTAAATATATTTTGCCCATGCTGTTTTTATTTTAGCTAC  1041

seq1  TTAAGTATTGAATATCTAAAATAATCATCCTGTGTTGATTAACTACCATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATTGAATATCTAAAATAATCATCCTGTGTTGATTAACTACCATG  1091

seq1  AACATATAGACAGGTTTCATTTCCACATAAATTCATGCAGAGAGTGAGAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAGACAGGTTTCATTTCCACATAAATTCATGCAGAGAGTGAGAG  1141

seq1  AATTC  1152
      |||||
seq2  AATTC  1146