BAC Information

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BAC

Clone NameB6Ng01-175D20
Chromosome1 (Build37)
Map Location 32,743,747 - 32,744,915
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666056, LOC100041238, Khdrbs2, EG408191
Downstream geneEG633498, LOC213711, LOC100040828, EG666108, Prim2, 1700001G17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175D20.bB6Ng01-175D20.g
ACCGA003095GA003096
length1,1941,174
definitionB6Ng01-175D20.b B6Ng01-175D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactaaatggctgagaagtacctgaaaaaatg
ttcaacatccttaatcatcatggaaatgctaatataaacaaccctgaaat
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaaga
gatactggtgaggatgtggagaaagaggaacactcctccattgttggtgg
cattgcaagcttgtacaaccactctggaagtctgtctggcagttcctcag
aaaattggacatagtactaccggaggatcctgcaatacctctcctgggca
tatatccagaagattttccaactggtaagaaggacacatgctcctctatg
ttcatagcagccttatttataatagccagaagctggaaagaacacagatg
cccctcaacagaggaatggatacagaaaatgtggtacattacacaatgga
ttactactcagctattaaaaacaatgaatttatgaaattcctagtcaaat
ggatggacctggagggcatcatcctgagttaggtaacccaatcacaaaag
aactcgcacaatacgtactcagttataagttgatattagcccagaaattt
agaatacccaagatataagatacaatttgctaaacagatgaaactgaaga
agaatgaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggaggtgagatgaa
agattgaccatctagcgacttctatatccagggatccatcccataatcag
cttccaaatgctgagaccattgcatacactagcaagattttgcttaaaga
acccacatatggctgtctcttgtgagactatgccagggcctgccaaacgc
agaagtggatgctcacagtctatttggatggattacagggcccccaatgg
aggaggtagagaaaatacccaaggagcctgagggatctgcacccttatta
gtggacaacatatcaactaaccaaaaccccccggagctcgtgtctctagc
tgcatattttatcagagatgggcctagtgggtcatcaggtgtaaagagag
gccatggtccgttgcaacttatatgccctcagttacaggaatgccatgtc
aagaactggagtgggttggtctaggttgacagtggctctacact
gaattcatacgggcttatggttccaggagaatattagagtccgtgacaca
gcagtcagcaagcatggcggccagaggagcacctgaactcatatcttgaa
ttacaacaagaagtggagatggcacactagaaatagcaagatgctttaca
ttttcaaaggcaaactccaaagatagactttccccagcaaggccacattt
cttcaaactcccaaacagtgctgctaactggaagctaagagctcaaacac
tgaagactgtggaaaacatctcacttgaacctacatagctcgtaaatcct
ttgctgagatgagtccctccacaggaagcagcaaagccaccaaccctatc
catcaataggaccatagtttaccaaggcttctcaagctctatatgctgct
cactgcttgtttttgtgagagatgattggctgattggctgcttgaggttt
tggttgggtttgttaagaaagcttctaaagtcatagtcaaaaagataact
tcatctcactctacatattagtcccagttaaatcagacatccttagtggt
attttctgtagtggagaatggtcaaatgttcatattctcctggaggaatc
tcagggtcctttctgaaatagggagaaagtgataagaggcaggaactaga
agaaagaatacagatggagaaaggccatgatgatctgatgagagaacgct
ttgatttatcattcatacagtatgtcagtcactttgtaaggcacggaaaa
tgaattccaggtgagacaattttaatttacagttctttggaattaggaaa
tgagcaagtaaaacctaaaagaaggagcctaggcagaacctattgtcaca
gcactaggccactgggaacctcaacttaaggccacttgaggtcctggcta
gtctctccattggttttggatccatttgacttgggatctaaaatagaaag
tcttactttaaaaaagtagccaaccacccttaaagtatttattccaataa
gcttctcaagacatgtgaactaatgattgaaatgaaaacttccacaactc
aaaaagctcaacagaatattgtatttaaagtggctgcaagtagaactagc
tcaaagtgtctctcctggtctctgaaatgctggcactgtatcacttccat
tctttccaacctcagtccctacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32743747_32744915
seq2: B6Ng01-175D20.g_65_1238

seq1  GAATTCATACGGGCTTATGGTTCCAGGAGAATATTAGAGTCCGTGACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACGGGCTTATGGTTCCAGGAGAATATTAGAGTCCGTGACACA  50

seq1  GCAGTCAGCAAGCATGGCGGCCAGAGGAGCACCTGAACTCATATCTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGCAAGCATGGCGGCCAGAGGAGCACCTGAACTCATATCTTGAA  100

seq1  TTACAACAAGAAGTGGAGATGGCACACTAGAAATAGCAAGATGCTTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACAAGAAGTGGAGATGGCACACTAGAAATAGCAAGATGCTTTACA  150

seq1  TTTTCAAAGGCAAACTCCAAAGATAGACTTTCCCCAGCAAGGCCACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGGCAAACTCCAAAGATAGACTTTCCCCAGCAAGGCCACATTT  200

seq1  CTTCAAACTCCCAAACAGTGCTGCTAACTGGAAGCTAAGAGCTCAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAACTCCCAAACAGTGCTGCTAACTGGAAGCTAAGAGCTCAAACAC  250

seq1  TGAAGACTGTGGAAAACATCTCACTTGAACCTACATAGCTCGTAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTGTGGAAAACATCTCACTTGAACCTACATAGCTCGTAAATCCT  300

seq1  TTGCTGAGATGAGTCCCTCCACAGGAAGCAGCAAAGCCACCAACCCTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGATGAGTCCCTCCACAGGAAGCAGCAAAGCCACCAACCCTATC  350

seq1  CATCAATAGGACCATAGTTTACCAAGGCTTCTCAAGCTCTATATGCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATAGGACCATAGTTTACCAAGGCTTCTCAAGCTCTATATGCTGCT  400

seq1  CACTGCTTGTTTTTGTGAGAGATGATTGGCTGATTGGCTGCTTGAGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTTGTTTTTGTGAGAGATGATTGGCTGATTGGCTGCTTGAGGTTT  450

seq1  TGGTTGGGTTTGTTAAGAAAGCTTCTAAAGTCATAGTCAAAAAGATAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGTTTGTTAAGAAAGCTTCTAAAGTCATAGTCAAAAAGATAACT  500

seq1  TCATCTCACTCTACATATTAGTCCCAGTTAAATCAGACATCCTTAGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCACTCTACATATTAGTCCCAGTTAAATCAGACATCCTTAGTGGT  550

seq1  ATTTTCTGTAGTGGAGAATGGTCAAATGTTCATATTCTCCTGGAGGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGTAGTGGAGAATGGTCAAATGTTCATATTCTCCTGGAGGAATC  600

seq1  TCAGGGTCCTTTCTGAAATAGGGAGAAAGTGATAAGAGGCAGGAACTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTCCTTTCTGAAATAGGGAGAAAGTGATAAGAGGCAGGAACTAGA  650

seq1  AGAAAGAATACAGATGGAGAAAGGCCATGATGATCTGATGAGAGAACGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAATACAGATGGAGAAAGGCCATGATGATCTGATGAGAGAACGCT  700

seq1  TTGATTTATCATTCATACAGTATGTCAGTCACTTTGTAAGGCACGGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTATCATTCATACAGTATGTCAGTCACTTTGTAAGGCACGGAAAA  750

seq1  TGAATTCCAGGTGAGACAATTTTAATTTACAGTTCTTTGGAATTAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCCAGGTGAGACAATTTTAATTTACAGTTCTTTGGAATTAGGAAA  800

seq1  TGAGCAAGTAAAACCTAAAAGAAGGAGCCTAGGCAGAACCTATTGTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGTAAAACCTAAAAGAAGGAGCCTAGGCAGAACCTATTGTCACA  850

seq1  GCACTAGGCCACTGGGAACCTCAACTTAAGGCCACTTGAGGTCCTGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGCCACTGGGAACCTCAACTTAAGGCCACTTGAGGTCCTGGCTA  900

seq1  GTTCTCTCCATTGG-TTTGGATCCATTTGAC-TGGGATCTAAAATAGAAA  948
      | |||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  G-TCTCTCCATTGGTTTTGGATCCATTTGACTTGGGATCTAAAATAGAAA  949

seq1  GTC-TACTTT-AAAAAGTAGCCAACCACCC-TAAAGTA-TTATTCC-ATA  993
      ||| |||||| ||||||||||||||||||| ||||||| ||||||| |||
seq2  GTCTTACTTTAAAAAAGTAGCCAACCACCCTTAAAGTATTTATTCCAATA  999

seq1  AGC-TCTCAAGACATGTGAAACTAAGGATTG-AATG-AAACTT-CACAAC  1039
      ||| |||||||||||||| |||||| ||||| |||| |||||| ||||||
seq2  AGCTTCTCAAGACATGTG-AACTAATGATTGAAATGAAAACTTCCACAAC  1048

seq1  TTCAAAAAGCTCAACAGAATATTTGTATTTAAGTTGGCTGCCAAGTAG-A  1088
       |||||||||||||||||||| ||||||||||  |||||| ||||||| |
seq2  -TCAAAAAGCTCAACAGAATA-TTGTATTTAAAGTGGCTG-CAAGTAGAA  1095

seq1  CTAGCTCAAAGGTTGGCTCTCCTGGTCTCTGAAATGGCTGGCACTGTATC  1138
      |||||||||||  || ||||||||||||||||||| ||||||||||||||
seq2  CTAGCTCAAAG--TGTCTCTCCTGGTCTCTGAAAT-GCTGGCACTGTATC  1142

seq1  ACCTTCCTTTCTTTCCAACCTCA--TCCTACAC  1169
      | ||||| |||||||||||||||   |||||||
seq2  A-CTTCCATTCTTTCCAACCTCAGTCCCTACAC  1174