BAC Information

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BAC

Clone NameB6Ng01-182L08
Chromosome1 (Build37)
Map Location 92,660,139 - 92,661,295
singlet/doubletsinglet
Overlap genenone
Upstream geneCentg2, Gbx2, Asb18, Iqca, Cxcr7, Cops8
Downstream geneCol6a3, Mlph, Prlh, Rab17, Lrrfip1, Gm817, LOC665766, Ramp1, Ube2f, LOC665783, Scly, Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2, Traf3ip1, Asb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182L08.bB6Ng01-182L08.g
ACCGA008529GA008530
length1,1731,095
definitionB6Ng01-182L08.b B6Ng01-182L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagccccatacatgcctctacctgaggaatgtaacatagcctc
aattagtttacaggatcaatttcctttctcccaataagagcctgttcagc
cagtacctgaaattcaggaaatgctttcccatgctgaggcattccaggta
ccctaagtccccagccaatgacctttgaccatcctgaatgtccctgccct
cagtccttcaaaactttataagccttcaatcaccctaggtgaagttcatc
tgcctactgactttgggtcttggtgtggtttatccaccatacatactcac
agggctttcaaatatatacactcccactctgccttcctctctcctccctt
ctcaatgtctctgctccctttgcccttgtggaatgtatcgattggtgatc
cacaagagtgggcagacccacagaggatagtcaaagttatataggtagga
atgagccattcctccccccccccgcccccacctctgagtcaccaaatggt
ctccactctccactgaccacgtgcccagcctcttttctttctcaagggat
gttatagtgattaaattcaaagatggaatgtcactttatgtggcaacatc
acaggagttttctatagattgagtaaccctagaaaggtatagggcttgag
ctaactttcttaaccctctggcgatgctccaccagagggtgacctgtctg
gtaaagagccccagcattgagagcctgtgggtgacattgccttacacaga
gatgcagaagagaaaaagggacttcttccccaagctagtcctctagagag
ccagtatatgcctcacaaaggagttgtcaggggaaacctgtcacagacat
gagccaggaacaacagcaactgacagacaccagctaacatctcccattta
gactccaggaagcagcccactatgacactcaaagaggcactgggatgtca
gatttcactcaaatttccaccccacagccaggaagttgagcttttgcttg
gggagcaaagcctagaatgaggcctaagacagaaagcttttatctaggaa
tgatattttaacctcgaaaatgaattaaaagatttctggtttaaggactc
cggtaatggaatcatttcaaggcaccaatcatgaacaaagaacgatggac
ttgtctgtgtctctgaaatgtgg
gaattcagtaagaatgttacctattcagtaacattcaaatttacttctag
tagagacagtgagactaattaggcattacaatttacttgaatagagctag
aaaagctcagggctagtctacatagtaattacttaggacaatagcccagt
cacacccaaacacaggaatacacaatggcccaggaaataggtgggttgta
gtattattcatgaaagggttagtagaacagaattcccctggtgcaggttt
tcactaggcccagaggaataacataatcagatatttactaaagggcccct
ggtggtgggtttaacaatagactagcattgcatcagagcattcacctggc
tcctgtgtttagctgatcttaattaagtgttgttactattctcagttgta
aacacggcctggctcccgccatctttttatgtatacattttctttgtttt
gtgttaagatcagtgtaccttgacagatgtatttgcctagctttcttgtt
tttcttctgtattataagactggtgctcgctttgagaaaatacattcaga
tatacactcccttgtgtccgtatttgtttgtctttcgtgtcaactccttg
ctcgcctgtaactagaaccccattttctgcagatctaggacccaattgag
gttcatctgcagaagctggtgcccgaacagggactcctggacaggtaaga
ctttatatctcttcttcttctttatttctcaagcaaggataggatcttgt
ctttggtgctgcagactgactgataaaggctcatcagtttgaggaggaca
aagtagttttagcatggggcagtctgacattaaaacatgtttagatgtct
caccagctgtagaaaaggcctatgctgtagcaatgaagagacaggaaact
cagcgccaattttagacacctatgagaatgaaaagcgttcctcaagggaa
ttaagctgcatgttttcagttggttaaaattcagacacctgaggaaggga
ttgttaggaattccctctgggaaacaaaggcctttcttcaggtcttcttg
ccccatgctgtgggaatggattgttaaatcaagagttccatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_92660139_92661295
seq2: B6Ng01-182L08.b_43_1215

seq1  GAATTCTAAGCCCCATACATGCCTCTACCTGAGGAATGTAACATAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCCCATACATGCCTCTACCTGAGGAATGTAACATAGCCTC  50

seq1  AATTAGTTTACAGGATCAATTTCCTTTCTCCCAATAAGAGCCTGTTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTTTACAGGATCAATTTCCTTTCTCCCAATAAGAGCCTGTTCAGC  100

seq1  CAGTACCTGAAATTCAGGAAATGCTTTCCCATGCTGAGGCATTCCAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTGAAATTCAGGAAATGCTTTCCCATGCTGAGGCATTCCAGGTA  150

seq1  CCCTAAGTCCCCAGCCAATGACCTTTGACCATCCTGAATGTCCCTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGTCCCCAGCCAATGACCTTTGACCATCCTGAATGTCCCTGCCCT  200

seq1  CAGTCCTTCAAAACTTTATAAGCCTTCAATCACCCTAGGTGAAGTTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTCAAAACTTTATAAGCCTTCAATCACCCTAGGTGAAGTTCATC  250

seq1  TGCCTACTGACTTTGGGTCTTGGTGTGGTTTATCCACCATACATACTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTGACTTTGGGTCTTGGTGTGGTTTATCCACCATACATACTCAC  300

seq1  AGGGCTTTCAAATATATACACTCCCACTCTGCCTTCCTCTCTCCTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTCAAATATATACACTCCCACTCTGCCTTCCTCTCTCCTCCCTT  350

seq1  CTCAATGTCTCTGCTCCCTTTGCCCTTGTGGAATGTATCGATTGGTGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTCTCTGCTCCCTTTGCCCTTGTGGAATGTATCGATTGGTGATC  400

seq1  CACAAGAGTGGGCAGACCCACAGAGGATAGTCAAAGTTATATAGGTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGTGGGCAGACCCACAGAGGATAGTCAAAGTTATATAGGTAGGA  450

seq1  ATGAGCCATTCCTCCCCCCCCCCGCCCCCACCTCTGAGTCACCAAATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCATTCCTCCCCCCCCCCGCCCCCACCTCTGAGTCACCAAATGGT  500

seq1  CTCCACTCTCCACTGACCACGTGCCCAGCCTCTTTTCTTTCTCAAGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCTCCACTGACCACGTGCCCAGCCTCTTTTCTTTCTCAAGGGAT  550

seq1  GTTATAGTGATTAAATTCAAAGATGGAATGTCACTTTATGTGGCAACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGTGATTAAATTCAAAGATGGAATGTCACTTTATGTGGCAACATC  600

seq1  ACAGGAGTTTTCTATAGATTGAGTAACCCTAGAAAGGTATAGGGCTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTTTTCTATAGATTGAGTAACCCTAGAAAGGTATAGGGCTTGAG  650

seq1  CTAACTTTCTTAACCCTCTGGCGATGCTCCACCAGAGGGTGACCTGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTTCTTAACCCTCTGGCGATGCTCCACCAGAGGGTGACCTGTCTG  700

seq1  GTAAAGAGCCCCAGCATTGAGAGCCTGTGGGTGACATTGCCTTACACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGCCCCAGCATTGAGAGCCTGTGGGTGACATTGCCTTACACAGA  750

seq1  GATGCAGAAGAGAAAAAGGAACTTCTTCCCCAAGCTAGTCCTCTAGAGAG  800
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATGCAGAAGAGAAAAAGGGACTTCTTCCCCAAGCTAGTCCTCTAGAGAG  800

seq1  CCAGTATATGCCTCACAAAGGAGTTGTCAGGGGAAACCTGTCACAGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATATGCCTCACAAAGGAGTTGTCAGGGGAAACCTGTCACAGACAT  850

seq1  GAGCCAGGAACAACAGCAACTGACAGACACCAGCTAACATCTCCCATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGAACAACAGCAACTGACAGACACCAGCTAACATCTCCCATTTA  900

seq1  GACTCCAGGAAGCAGCCCACTATGACACTCAAAGAGGCACTGGGATGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGGAAGCAGCCCACTATGACACTCAAAGAGGCACTGGGATGTCA  950

seq1  GATTTCACTCAAA-TTCCA-CCCACAGCCAGG-AGTTGAGCCTTTGC-TG  996
      ||||||||||||| ||||| |||||||||||| |||||||| ||||| ||
seq2  GATTTCACTCAAATTTCCACCCCACAGCCAGGAAGTTGAGCTTTTGCTTG  1000

seq1  GGGAGCAAAGCCTAG-ATGAGG-CTAAGACAGAAAGC-TTTATCTAGG-A  1042
      ||||||||||||||| |||||| |||||||||||||| |||||||||| |
seq2  GGGAGCAAAGCCTAGAATGAGGCCTAAGACAGAAAGCTTTTATCTAGGAA  1050

seq1  TGATA-TTTAACCTCGAAAATGAA-TAAAAGA-TTCTGGTTTTAAGACTC  1089
      ||||| |||||||||||||||||| ||||||| ||||||||| | |||||
seq2  TGATATTTTAACCTCGAAAATGAATTAAAAGATTTCTGGTTTAAGGACTC  1100

seq1  C-GTAGTG--ATCATTTC-AGGCACCAATCATGACAAAGGAACAGTGGGA  1135
      | ||| ||  |||||||| |||||||||||||||  || |||| |  |||
seq2  CGGTAATGGAATCATTTCAAGGCACCAATCATGAACAAAGAAC-GATGGA  1149

seq1  CTTG-CTGTG-GTCTGATATGTGG  1157
      |||| |||||  ||||| ||||||
seq2  CTTGTCTGTGTCTCTGAAATGTGG  1173