BAC Information

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BAC

Clone NameB6Ng01-183I11
Chromosome1 (Build37)
Map Location 67,523,167 - 67,706,874
singlet/doubletdoublet
Overlap geneKif22-ps
Upstream geneC030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I11.bB6Ng01-183I11.g
ACCGA009128GA009129
length1,165923
definitionB6Ng01-183I11.b B6Ng01-183I11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,705,723 - 67,706,874)(67,523,167 - 67,524,086)
sequence
gaattcatttagagaaaaaaaattctcaaaaacaaaaatcaagctttctt
ttttgttgttgttgttgttttgtttgtttgtttgtttgtttgagacaggg
tttctctgtgcagccctggctgtcctggaacttacttcatagaccaggct
ggcctcgaactcagaaatctgcctgcctctgcctcccaagtgctgggatt
aaaggcatgcgccaccacacccgcccccccaaatcaagctttcaaactta
acacaagtagggatgcctccaagtcttccatgataattaaatgatgttat
tcatttaaacatttagaatgagtgatacaaaactcacagctgtggatgta
tagttctcactgcctttcctcctggtgcttatgctaactgaacaatcaac
agacctttagacgtgctgacagagattccttcagcgagtaggccttgtgt
ctaagaatatgggggcattataataataataatttgatcccattagttct
tagctttatacatacattgtagtacttactctctttaagggaaatgaagt
tggagcacacatttgtgcatgcattttaatctctattgtttattaagaga
aagactttggtcaagtttagagcagagacttcctactaaaagacttcaat
tctagtaaatattgttttcttttcgatcttgtagatcatggttaacattc
accttattactaaaattatgtttttcttagaggtttgttaccattggctt
aatcactacaaaccaaccaacatatgtatacctgaacacttgacttttca
aacatctttgggtacctcatctttaactacatcacaggcatcctagatta
tcaatggctttctataaaaaacatgctctcgatattacaaatgaatggaa
aaaacaaaataacaaaagcctatgtatttctctttccaccctggggttga
tttccatacagcctgagagttagaaaatctataagacaattagatatttt
tttactctaaaagtggatcttaacattgtctttagttacaaaaaatattt
catatgaatgacgagcctccatatccactcaagaattttgttagaaatat
cataaaatactacctacttccagaagaaggaatgagctcccactctcaga
agagaaagaacctat

gaattcagtccctcatgtttgcacagcaaacactttacccactaatacat
ctctccatgtatactttaatttttttatgcagattttattcacaccttaa
tgatccttgctctgaggatattcttataatgttcattttttattaatagg
taatgcacatctacccaaaataccaaaaatcatgtttgctggtgtggtgt
tttcgcttatttggatttttacaaaattttatattattttaatgattgcc
agatgaattccctgtattatagtttttaaaaatcagtgagaactcaacat
gtgatacatattgactgatatttacatttggatttctttatatcgatggg
gtcaagtgtatttgaataggcacgtgctgacagtaatctacagagccgga
agtaatgggatttttatagactgaacgcctttagaaatttcactcactcc
caaccttgatgaactgtcataataattgattgtattaacggaaataaata
gccaaatttgctttgccttcacaatgaccctgttccatctgacatgggtg
agggataaggttacttcacactgccccagtcaggtcaaggcgcaggaaaa
gccttggctcgggcctttaattcaatcccgcagacaagaggatgaatcgg
cgttgtcaatgtctctctctttggcgtgggtaccaaataaccttgcttca
cttccttgtttctcccggagaaggtttttggcagtacattgcttactttt
ccgttgcggaagtttacacagtttaagagggaacagtaattacaagccat
taaactcagaaggccacccgcacaaatgatcattgtgaagaggacacagc
cttcaagtttcagtaaaggatgattaccagagcattttagtggcgcgctg
gtgaagggggtggggggtggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67705723_67706874
seq2: B6Ng01-183I11.b_40_1204 (reverse)

seq1  ATAGG-TCCTTCTC-TCTGAGA--TGGAGCTCATCTC----TCTGGAAAG  42
      ||||| || ||||| |||||||   |||||||||  |    ||||| |||
seq2  ATAGGTTCTTTCTCTTCTGAGAGTGGGAGCTCATTCCTTCTTCTGG-AAG  49

seq1  TAGGTAGTA-TTTATGATA-TTCTAACAAAA-TCTTGAGT-GATATGGA-  87
      ||||||||| ||||||||| ||||||||||| |||||||| |||||||| 
seq2  TAGGTAGTATTTTATGATATTTCTAACAAAATTCTTGAGTGGATATGGAG  99

seq1  GCTCGTCATTCATATGAAATA-TTTTTGTAACTAAAGACAATGTTAAGAT  136
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCTCGTCATTCATATGAAATATTTTTTGTAACTAAAGACAATGTTAAGAT  149

seq1  CCACTTTTAGAGTAAAAAAATATCTAATTGTCTTATAGATTTTCTAACTC  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTAGAGTAAAAAAATATCTAATTGTCTTATAGATTTTCTAACTC  199

seq1  TCAGGCTGTATGGAAATCAACCCCAGGGTGGAAAGAGAAATACATAGGCT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGTATGGAAATCAACCCCAGGGTGGAAAGAGAAATACATAGGCT  249

seq1  TTTGTTATTTTGTTTTTTCCATTCATTTGTAATATCGAGAGCATGTTTTT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATTTTGTTTTTTCCATTCATTTGTAATATCGAGAGCATGTTTTT  299

seq1  TATAGAAAGCCATTGATAATCTAGGATGCCTGTGATGTAGTTAAAGATGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGCCATTGATAATCTAGGATGCCTGTGATGTAGTTAAAGATGA  349

seq1  GGTACCCAAAGATGTTTGAAAAGTCAAGTGTTCAGGTATACATATGTTGG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCCAAAGATGTTTGAAAAGTCAAGTGTTCAGGTATACATATGTTGG  399

seq1  TTGGTTTGTAGTGATTAAGCCAATGGTAACAAACCTCTAAGAAAAACATA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGTAGTGATTAAGCCAATGGTAACAAACCTCTAAGAAAAACATA  449

seq1  ATTTTAGTAATAAGGTGAATGTTAACCATGATCTACAAGATCGAAAAGAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTAATAAGGTGAATGTTAACCATGATCTACAAGATCGAAAAGAA  499

seq1  AACAATATTTACTAGAATTGAAGTCTTTTAGTAGGAAGTCTCTGCTCTAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATTTACTAGAATTGAAGTCTTTTAGTAGGAAGTCTCTGCTCTAA  549

seq1  ACTTGACCAAAGTCTTTCTCTTAATAAACAATAGAGATTAAAATGCATGC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACCAAAGTCTTTCTCTTAATAAACAATAGAGATTAAAATGCATGC  599

seq1  ACAAATGTGTGCTCCAACTTCATTTCCCTTAAAGAGAGTAAGTACTACAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTGTGCTCCAACTTCATTTCCCTTAAAGAGAGTAAGTACTACAA  649

seq1  TGTATGTATAAAGCTAAGAACTAATGGGATCAAATTATTATTATTATAAT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATAAAGCTAAGAACTAATGGGATCAAATTATTATTATTATAAT  699

seq1  GCCCCCATATTCTTAGACACAAGGCCTACTCGCTGAAGGAATCTCTGTCA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCATATTCTTAGACACAAGGCCTACTCGCTGAAGGAATCTCTGTCA  749

seq1  GCACGTCTAAAGGTCTGTTGATTGTTCAGTTAGCATAAGCACCAGGAGGA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTCTAAAGGTCTGTTGATTGTTCAGTTAGCATAAGCACCAGGAGGA  799

seq1  AAGGCAGTGAGAACTATACATCCACAGCTGTGAGTTTTGTATCACTCATT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTGAGAACTATACATCCACAGCTGTGAGTTTTGTATCACTCATT  849

seq1  CTAAATGTTTAAATGAATAACATCATTTAATTATCATGGAAGACTTGGAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTTTAAATGAATAACATCATTTAATTATCATGGAAGACTTGGAG  899

seq1  GCATCCCTACTTGTGTTAAGTTTGAAAGCTTGATTTGGGGGGGCGGGTGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCTACTTGTGTTAAGTTTGAAAGCTTGATTTGGGGGGGCGGGTGT  949

seq1  GGTGGCGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGAT  999

seq1  TTCTGAGTTCGAGGCCAGCCTGGTCTATGAAGTAAGTTCCAGGACAGCCA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTTCGAGGCCAGCCTGGTCTATGAAGTAAGTTCCAGGACAGCCA  1049

seq1  GGGCTGCACAGAGAAACCCTGTCTCAAACAAACAAACAAACAAACAAAAC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCACAGAGAAACCCTGTCTCAAACAAACAAACAAACAAACAAAAC  1099

seq1  AACAACAACAACAAAAAAGAAAGCTTGATTTTTGTTTTTGAGAATTTTTT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAAAAAAGAAAGCTTGATTTTTGTTTTTGAGAATTTTTT  1149

seq1  TTCTCTAAATGAATTC  1152
      ||||||||||||||||
seq2  TTCTCTAAATGAATTC  1165


seq1: chr1_67523167_67524086
seq2: B6Ng01-183I11.g_66_988

seq1  GAATTCAGTCCCTCATGTTTGCACAGCAAACACTTTACCCACTAATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCCTCATGTTTGCACAGCAAACACTTTACCCACTAATACAT  50

seq1  CTCTCCATGTATACTTTAATTTTTTTATGCAGATTTTATTCACACCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATGTATACTTTAATTTTTTTATGCAGATTTTATTCACACCTTAA  100

seq1  TGATCCTTGCTCTGAGGATATTCTTATAATGTTCATTTTTTATTAATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTGCTCTGAGGATATTCTTATAATGTTCATTTTTTATTAATAGG  150

seq1  TAATGCACATCTACCCAAAATACCAAAAATCATGTTTGCTGGTGTGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCACATCTACCCAAAATACCAAAAATCATGTTTGCTGGTGTGGTGT  200

seq1  TTTCGCTTATTTGGATTTTTACAAAATTTTATATTATTTTAATGATTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCTTATTTGGATTTTTACAAAATTTTATATTATTTTAATGATTGCC  250

seq1  AGATGAATTCCCTGTATTATAGTTTTTAAAAATCAGTGAGAACTCAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATTCCCTGTATTATAGTTTTTAAAAATCAGTGAGAACTCAACAT  300

seq1  GTGATACATATTGACTGATATTTACATTTGGATTTCTTTATATCGATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACATATTGACTGATATTTACATTTGGATTTCTTTATATCGATGGG  350

seq1  GTCAAGTGTATTTGAATAGGCACGTGCTGACAGTAATCTACAGAGCCGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTGTATTTGAATAGGCACGTGCTGACAGTAATCTACAGAGCCGGA  400

seq1  AGTAATGGGATTTTTATAGACTGAACGCCTTTAGAAATTTCACTCACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGGATTTTTATAGACTGAACGCCTTTAGAAATTTCACTCACTCC  450

seq1  CAACCTTGATGAACTGTCATAATAATTGATTGTATTAACGGAAATAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTGATGAACTGTCATAATAATTGATTGTATTAACGGAAATAAATA  500

seq1  GCCAAATTTGCTTTGCCTTCACAATGACCCTGTTCCATCTGACATGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATTTGCTTTGCCTTCACAATGACCCTGTTCCATCTGACATGGGTG  550

seq1  AGGGATAAGGTTACTTCACACTGCCCCAGTCAGGTCAAGGCGCAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAAGGTTACTTCACACTGCCCCAGTCAGGTCAAGGCGCAGGAAAA  600

seq1  GCCTTGGCTCGGGCCTTTAATTCAATCCCGCAGACAAGAGGATGAATCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGCTCGGGCCTTTAATTCAATCCCGCAGACAAGAGGATGAATCGG  650

seq1  CGTTGTCAATGTCTCTCTCTTTGGCGTGGGTACCAAATAACCTTGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTCAATGTCTCTCTCTTTGGCGTGGGTACCAAATAACCTTGCTTCA  700

seq1  CTTCCTTGTTTCTCCCGGAGAAGGTTTTTGGCAGTACATTGCTTAC-TTT  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTCCTTGTTTCTCCCGGAGAAGGTTTTTGGCAGTACATTGCTTACTTTT  750

seq1  CCGTTGCGGAAG-TTACACAGTTTAAAGAGGGAACAGTAATTACAAGCCA  798
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  CCGTTGCGGAAGTTTACACAGTTT-AAGAGGGAACAGTAATTACAAGCCA  799

seq1  TTAAACTCAGAAGGCCACCCGCACAAATGATCATTGTGAAGAGGACACAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCAGAAGGCCACCCGCACAAATGATCATTGTGAAGAGGACACAG  849

seq1  CCTTCAAG-TTCAGTAAAGGATGATTACCAGAGCATTTTAGTGGCGCGCT  897
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGTTTCAGTAAAGGATGATTACCAGAGCATTTTAGTGGCGCGCT  899

seq1  GGTGAAGGGGGT-GGGGGTGGAGG  920
      |||||||||||| ||||||||| |
seq2  GGTGAAGGGGGTGGGGGGTGGAAG  923


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