BAC Information

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BAC

Clone NameB6Ng01-187H05
Chromosome1 (Build37)
Map Location 134,108,844 - 134,312,150
singlet/doubletdoublet
Overlap geneLemd1, EG638532, Klhdc8a, Nuak2, Tmcc2
Upstream geneRassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b, LOC667238, Ctse, 5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1, Slc45a3, Elk4, Mfsd4, Pctk3, LOC100042221
Downstream geneRipk5, Rbbp5, Tmem81, Cntn2, Nfasc, Lrrn2, Mdm4, LOC638636, Pik3c2b, Ppp1r15b, Plekha6, Golt1a, Kiss1, LOC100038824, Ren1, Etnk2, Sox13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187H05.bB6Ng01-187H05.g
ACCGA012029GA012030
length92198
definitionB6Ng01-187H05.b B6Ng01-187H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,108,844 - 134,108,936)(134,311,953 - 134,312,150)
sequence
gaattcttccactgcagtgtgctgagtatcctgcaggaggcgctctagtc
atctcagcctcagcggagccggggtggggtggggtgtaggat
catatcaagttccaggccaggccagacttagctacagagttacgacctct
ggggcaggagaaaggggagagggggaggagaatgaggaagaagaagagga
agacatgtcagaaggtacaaatggtatgaggaagactaaatctcccttag
tttttctattcctgtctcctagtcacctagttcccttcagggtgcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_134108844_134108936
seq2: B6Ng01-187H05.b_41_133

seq1  GGAATTCTTCCACTGCAGTGTGCTGAGTATCCTGCAGGAGGCGCTCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTTCCACTGCAGTGTGCTGAGTATCCTGCAGGAGGCGCTCTAGT  50

seq1  CATCTCAGCCTCAGCGGAGCCGGGGTGGGGTGGGGTGTAGGAT  93
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGCCTCAGCGGAGCCGGGGTGGGGTGGGGTGTAGGAT  93

seq1: chr1_134311953_134312150
seq2: B6Ng01-187H05.g_70_267 (reverse)

seq1  GCTGCACCCTGAAGGGAACTAGGTGACTAGGAGACAGGAATAGAAAAACT  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACCCTGAAGGGAACTAGGTGACTAGGAGACAGGAATAGAAAAACT  50

seq1  AAGGGAGATTTAGTCTTCCTCATACCATTTGTACCTTCTGACATGTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGATTTAGTCTTCCTCATACCATTTGTACCTTCTGACATGTCTTC  100

seq1  CTCTTCTTCTTCCTCATTCTCCTCCCCCTCTCCCCTTTCTCCTGCCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTCTTCCTCATTCTCCTCCCCCTCTCCCCTTTCTCCTGCCCCAG  150

seq1  AGGTCGTAACTCTGTAGCTAAGTCTGGCCTGGCCTGGAACTTGATATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGTAACTCTGTAGCTAAGTCTGGCCTGGCCTGGAACTTGATATG  198