BAC Information

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BAC

Clone NameB6Ng01-187P21
Chromosome1 (Build37)
Map Location 113,797,600 - 113,931,666
singlet/doubletdoublet
Overlap genenone
Upstream geneCdh19, EG666578, Dsel, LOC547247
Downstream geneEG626897, LOC666615, LOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187P21.bB6Ng01-187P21.g
ACCGA012419GA012420
length1,102850
definitionB6Ng01-187P21.b B6Ng01-187P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,797,600 - 113,798,701)(113,931,104 - 113,931,666)
sequence
gaattcaacaattcacagatcagactgaacatcaaggagatagagttaaa
actcggaagcaaagtctagaggataatttactaaagctagtaaatcaaaa
taaggcagaggctgcagtattagaatttcaacacaaagagaaactatgga
agcagggcttagaacaggagatacaggaaattatagagtagcaagaacaa
cagaaagagaaatctaagacttggcaatgtggcttagaggaaacactaga
attgaagacacaggaaattatagatcagaataagagataataagatgaaa
acgaaggtgggagacaggaactggaaaagatgctaaaacaaaacatgtag
caacccacagatcagactgagcagcagagagaaaaaaaatgaggattgaa
aggaagactttgagaataaccttttaaaattaatcaatcaaaatgagatg
gacaacagacaatcagaattgcaatataaagaaaaaaatcaaaacgagga
ggcagaaccttgaacagagaattcaggaaatcaaggaataggaagagtga
caaaatgagagatatgaagtatggtcatagatattaagggaagaatttaa
gttttcaattaaggaaaatactcaggttgcaacagaagataaaattagag
aaagccaaccaaataataaccaggttattagaaaacaactttattctatc
cagttcatataaaacaaggacctccagacaatgatttccacagggttatc
agaaatttgaatggtaacctgtggatgtgttagaactgagaaaacttaag
caaagtttaactaattttgaaatgtatgcaccatttataaaacaaatcct
gacttcttggcctattaaaaatagaaaaactccccaagactggaaagata
tggcaagatcaatactagaacatgctgctaatttaacaatggtttggcat
ggtagagagatgagccaagggagatagcacaacaaatagagccagaggag
agatttccacagatccacaacttagtgaaaggttgcttgctgagatagag
ttacaggctgtatatggataaagaactctggcattgtgtcaaatgtcagt
ct

gaattctctgtttagcactatatctgatattttgaatgaacgggcttttt
ggatttttggaggttagctttttgtgttccttatatagtttggattttag
ccctctatcgaataggggttagtaaagatttttttttcccaatctatagg
ttgccagtttgtcctaatgactgtgtcctttgccttccagaagcttttca
gtttcatgaggtgccatttatcaactcttgatctcagaacctgagccatt
ggagttctgtttgggaaatttctccttgtgccaatgagttcgagtctctt
tcccactttctcttccattagattcagtgtatctgattttaggttgaggt
cctgtatccacttggacttgagctttgtgcaaggtgacaaatatggatat
atttttatttttctacatacagactgccagttagaccaacatcatttatt
gaagatgttttctgctttgcattatatcttttggattcgttttcaaaaat
caagtttccataggtgtgtggttttatgtgtgggtttttgattctattcc
attgatcaacctgtttgtctctgttccaaattccaacacaattcttcaac
aacatgaaaagagcaattctcaatttcatatggaaaaacaaaaaacccag
gatagctgaggcttttttttttcttttctttttccatttaatagctctgc
tggaaaagagaaaaacaaagggatgttacaatacaaaggtgaatttgtaa
atttgattccagtgaaaacagtccttggaaatggggggatcaatctacag
gtctgtgctctgagttattgcaaaaaaaaatgaaaatagttacttagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113797600_113798701
seq2: B6Ng01-187P21.b_46_1147

seq1  GAATTCAACAATTCACAGATCAGACTGAACATCAAGGAGATAGAGTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAATTCACAGATCAGACTGAACATCAAGGAGATAGAGTTAAA  50

seq1  ACTCGGAAGCAAAGTCTAGAGGATAATTTACTAAAGCTAGTAAATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGAAGCAAAGTCTAGAGGATAATTTACTAAAGCTAGTAAATCAAAA  100

seq1  TAAGGCAGAGGCTGCAGTATTAGAATTTCAACACAAAGAGAAACTATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGAGGCTGCAGTATTAGAATTTCAACACAAAGAGAAACTATGGA  150

seq1  AGCAGGGCTTAGAACAGGAGATACAGGAAATTATAGAGTAGCAAGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGCTTAGAACAGGAGATACAGGAAATTATAGAGTAGCAAGAACAA  200

seq1  CAGAAAGAGAAATCTAAGACTTGGCAATGTGGCTTAGAGGAAACACTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGAAATCTAAGACTTGGCAATGTGGCTTAGAGGAAACACTAGA  250

seq1  ATTGAAGACACAGGAAATTATAGATCAGAATAAGAGATAATAAGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGACACAGGAAATTATAGATCAGAATAAGAGATAATAAGATGAAA  300

seq1  ACGAAGGTGGGAGACAGGAACTGGAAAAGATGCTAAAACAAAACATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGGTGGGAGACAGGAACTGGAAAAGATGCTAAAACAAAACATGTAG  350

seq1  CAACCCACAGATCAGACTGAGCAGCAGAGAGAAAAAAAATGAGGATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACAGATCAGACTGAGCAGCAGAGAGAAAAAAAATGAGGATTGAA  400

seq1  AGGAAGACTTTGAGAATAACCTTTTAAAATTAATCAATCAAAATGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACTTTGAGAATAACCTTTTAAAATTAATCAATCAAAATGAGATG  450

seq1  GACAACAGACAATCAGAATTGCAATATAAAGAAAAAAATCAAAACGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGACAATCAGAATTGCAATATAAAGAAAAAAATCAAAACGAGGA  500

seq1  GGCAGAACCTTGAACAGAGAATTCAGGAAATCAAGGAATAGGAAGAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACCTTGAACAGAGAATTCAGGAAATCAAGGAATAGGAAGAGTGA  550

seq1  CAAAATGAGAGATATGAAGTATGGTCATAGATATTAAGGGAAGAATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGAGATATGAAGTATGGTCATAGATATTAAGGGAAGAATTTAA  600

seq1  GTTTTCAATTAAGGAAAATACTCAGGTTGCAACAGAAGATAAAATTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAATTAAGGAAAATACTCAGGTTGCAACAGAAGATAAAATTAGAG  650

seq1  AAAGCCAACCAAATAATAACCAGGTTATTAGAAAACAACTTTATTCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAACCAAATAATAACCAGGTTATTAGAAAACAACTTTATTCTATC  700

seq1  CAGTTCATATAAAACAAGGACCTCCAGACAATGATTTCCACAGGGTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATATAAAACAAGGACCTCCAGACAATGATTTCCACAGGGTTATC  750

seq1  AGAAATTTGAATGGTAACCTGTGGATGTGTTAGAACTGAGAAAACTTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGAATGGTAACCTGTGGATGTGTTAGAACTGAGAAAACTTAAG  800

seq1  CAAAGTTTAACTAATTTTGAAATGTATGCACCATTTATAAAACAAATCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTAACTAATTTTGAAATGTATGCACCATTTATAAAACAAATCCT  850

seq1  GACTTCTTGGCCTATTAAAAATAGAAAAACTCCCCAAGACTGGAAAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTGGCCTATTAAAAATAGAAAAACTCCCCAAGACTGGAAAGATA  900

seq1  TGGCAAGATCAATACTAGAACATGCTGCTAATTT-ACAATGG-TTGGCAT  948
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  TGGCAAGATCAATACTAGAACATGCTGCTAATTTAACAATGGTTTGGCAT  950

seq1  GGTAGAGAGATGAGGCAAGGGAGATAGCACAACAAAATAGAGCCAGAGGG  998
      |||||||||||||| |||||||||||||||||| ||||||||||||| ||
seq2  GGTAGAGAGATGAGCCAAGGGAGATAGCACAAC-AAATAGAGCCAGA-GG  998

seq1  AGAGATTTCCACAGATCAACAACTTAGTG-AAGGTTGCTTTGCTGAGATA  1047
      ||||||||||||||||| ||||||||||| |||||||| |||||||||||
seq2  AGAGATTTCCACAGATCCACAACTTAGTGAAAGGTTGC-TTGCTGAGATA  1047

seq1  GAGGTACAGGCTGTATAT-GATAAAGAAACTCTGGCATTGTGTCAATTGT  1096
      ||| |||||||||||||| ||||||| ||||||||||||||||||| |||
seq2  GAGTTACAGGCTGTATATGGATAAAG-AACTCTGGCATTGTGTCAAATGT  1096

seq1  CAGTCT  1102
      ||||||
seq2  CAGTCT  1102


seq1: chr1_113931104_113931666
seq2: B6Ng01-187P21.g_352_914 (reverse)

seq1  TTTCTAAGTAAACTATTTTCATTTTTTTTGGC-ATAACTCAGAGCACAGA  49
      ||||||||| ||||||||||||||||||| || |||||||||||||||||
seq2  TTTCTAAGT-AACTATTTTCATTTTTTTTTGCAATAACTCAGAGCACAGA  49

seq1  CCTGTAGATTGATCCCCCCATTTCCAAGGACTGTTTTCACTGGAATCAAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGATTGATCCCCCCATTTCCAAGGACTGTTTTCACTGGAATCAAA  99

seq1  TTTAACAATTCACCTTTGTATTGTAACATCCCTTTTGTTTTTCTCTTTTC  149
      ||||  |||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTACAAATTCACCTTTGTATTGTAACATCCC-TTTGTTTTTCTCTTTTC  148

seq1  CAGCAGAGCTATTAAATGGAAAAAGAAAAG-AAAAAAAAAGCCTCAGCTA  198
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGCAGAGCTATTAAATGGAAAAAGAAAAGAAAAAAAAAAGCCTCAGCTA  198

seq1  TCCTGGGTTTTTTGTTTTTCCATATGAAATTGAGAATTGCTCTTTTCATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGTTTTTTGTTTTTCCATATGAAATTGAGAATTGCTCTTTTCATG  248

seq1  TTGTTGAAGAATTGTGTTGGAATTTGGAACAGAGACAAACAGGTTGATCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGAATTGTGTTGGAATTTGGAACAGAGACAAACAGGTTGATCA  298

seq1  ATGGAATAGAATCAAAAACCCACACATAAAACCACACACCTATGGAAACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATAGAATCAAAAACCCACACATAAAACCACACACCTATGGAAACT  348

seq1  TGATTTTTGAAAACGAATCCAAAAGATATAATGCAAAGCAGAAAACATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTGAAAACGAATCCAAAAGATATAATGCAAAGCAGAAAACATCT  398

seq1  TCAATAAATGATGTTGGTCTAACTGGCAGTCTGTATGTAGAAAAATAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATGATGTTGGTCTAACTGGCAGTCTGTATGTAGAAAAATAAAA  448

seq1  ATATATCCATATTTGTCACCTTGCACAAAGCTCAAGTCCAAGTGGATACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCATATTTGTCACCTTGCACAAAGCTCAAGTCCAAGTGGATACA  498

seq1  GGACCTCAACCTAAAATCAGATACACTGAATCTAATGGAAGAGAAAGTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCAACCTAAAATCAGATACACTGAATCTAATGGAAGAGAAAGTGG  548

seq1  GAAAGAGACTCGAAC  563
      |||||||||||||||
seq2  GAAAGAGACTCGAAC  563


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