BAC Information

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BAC

Clone NameB6Ng01-189H16
Chromosome1 (Build37)
Map Location 72,440,726 - 72,441,518
singlet/doubletsinglet
Overlap geneXrcc5
Upstream geneAbca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169
Downstream geneMarch4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189H16.bB6Ng01-189H16.g
ACCGA013491GA013492
length7961,231
definitionB6Ng01-189H16.b B6Ng01-189H16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatgttctgtggtttcaattatagtgttcattcagactaatcc
tcccctctgaagagctagaaaagagccggggaagccattcccttagaaga
aaaatgttataatttactgaaattgttcttaaccagaaataagcagtgta
tcgtgcagtttgtgtgggttgacaaatacaaacatccttttaaaagccca
cttcctaaatgttctcaattagctaaatagaaacaaagcagactgatagg
cctttgaaggcagccctcgacacaccatgctgtgggtgctaggaagttgc
aaatgtgggcttttgcagccatgtttgggaaaaacatgcactttagtatc
acaggaaaactggagtgatgaccacacactatgctgtcagcctttttgtg
gaaaagtttttagggttgaaatgagaagatatttagtgtttaggtcctaa
aatagttggcagagaataccagtacaggtttttgtgtgtagctaactgga
actgcagatctgagagtggcctggttcctttctgaatatgttgttcttgt
ttacagctggacatgatatagatcatggatgtgtggggaatccaagagtg
ccagctctgtgctgctgagagctctggcagcatccctgaggccgtgcagg
ggatgtgaagctctggacgttcatcctagcagacaacttgggaatgagtc
actccaggtctctacagagtgaccataaggacatatattacaagaaataa
cttagacccctattcaaatttataaagagcccattattttctgatt
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcccgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaaacgctgacaccatttgcatacactagcaagattttatcg
aaaaggacccagatgtagcttgtctcttgtgagactatgcccggggcctt
agcaaacacagaagtgggatgctcacagtccagcctattggatggatcat
aggtgctccctatggaggagctagagaaagtagccaaggagctaaaggga
tctgcaactcctattaggtggaacaacattatgaactctaccagtacccc
gggagctcttgactctagctgcttatatatccaaaagaatggtctagtcg
ggcaatcacctggtaaagaagaaggtccaatttgaactgcaacttatatg
gccagtacaggtgtaacctcatgaccaaaaaggggggatgtgggttgggg
ctagcggtgtgacatgtgcgtgggtagatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72440726_72441518
seq2: B6Ng01-189H16.b_44_839

seq1  GAATTCCTATGTTCTGTGGTTTCAATTATAGTGTTCATTCAGACTAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGTTCTGTGGTTTCAATTATAGTGTTCATTCAGACTAATCC  50

seq1  TCCCCTCTGAAGAGCTAGAAAAGAGCCGGGGAAGCCATTCCCTTAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTGAAGAGCTAGAAAAGAGCCGGGGAAGCCATTCCCTTAGAAGA  100

seq1  AAAATGTTATAATTTACTGAAATTGTTCTTAACCAGAAATAAGCAGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTATAATTTACTGAAATTGTTCTTAACCAGAAATAAGCAGTGTA  150

seq1  TCGTGCAGTTTGTGTGGGTTGACAAATACAAACATCCTTTTAAAAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCAGTTTGTGTGGGTTGACAAATACAAACATCCTTTTAAAAGCCCA  200

seq1  CTTCCTAAATGTTCTCAATTAGCTAAATAGAAACAAAGCAGACTGATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAATGTTCTCAATTAGCTAAATAGAAACAAAGCAGACTGATAGG  250

seq1  CCTTTGAAGGCAGCCCTCGACACACCATGCTGTGGGTGCTAGGAAGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAAGGCAGCCCTCGACACACCATGCTGTGGGTGCTAGGAAGTTGC  300

seq1  AAATGTGGGCTTTTGCAGCCATGTTTGGGAAAAACATGCACTTTAGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGGCTTTTGCAGCCATGTTTGGGAAAAACATGCACTTTAGTATC  350

seq1  ACAGGAAAACTGGAGTGATGACCACACACTATGCTGTCAGCCTTTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAACTGGAGTGATGACCACACACTATGCTGTCAGCCTTTTTGTG  400

seq1  GAAAAGTTTTTAGGGTTGAAATGAGAAGATATTTAGTGTTTAGGTCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTTTTAGGGTTGAAATGAGAAGATATTTAGTGTTTAGGTCCTAA  450

seq1  AATAGTTGGCAGAGAATACCAGTACAGGTTTTTGTGTGTAGCTAACTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTGGCAGAGAATACCAGTACAGGTTTTTGTGTGTAGCTAACTGGA  500

seq1  ACTGCAGATCTGAGAGTGGCCTGGTTCCTTTCTGAATATGTTGTTCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGATCTGAGAGTGGCCTGGTTCCTTTCTGAATATGTTGTTCTTGT  550

seq1  TTACAGCTGGACATGATATAGATCATGGATGTGTGGGGAATCCAAGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTGGACATGATATAGATCATGGATGTGTGGGGAATCCAAGAGTG  600

seq1  CCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTGTGCTGCTGAGAGCTCTGGCAGCATCCCTGAGGCCGTGCAGG  650

seq1  GGATGTGAAGCTCTGGACG-TCATCCTAGCAGACAACTTGGGAATGAGTC  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGATGTGAAGCTCTGGACGTTCATCCTAGCAGACAACTTGGGAATGAGTC  700

seq1  ACTCCAGGTCTCTACAGAGTGACCATAAGGACATATATTACAAGAAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGTCTCTACAGAGTGACCATAAGGACATATATTACAAGAAATAA  750

seq1  CTTAGA-CCCTATTCAAATTTATAAAGAG-CCATTATTTTCTGATT  793
      |||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CTTAGACCCCTATTCAAATTTATAAAGAGCCCATTATTTTCTGATT  796