BAC Information

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BAC

Clone NameB6Ng01-193K10
Chromosome1 (Build37)
Map Location 30,930,377 - 30,931,019
singlet/doubletsinglet
Overlap geneEG638995
Upstream geneLOC665944, EG624138, LOC100040699, Phf3
Downstream genePtp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193K10.bB6Ng01-193K10.g
ACCGA016564GA016565
length1,192617
definitionB6Ng01-193K10.b B6Ng01-193K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcatatgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctgcattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaaaatgccccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaaccccgat
gcccctcaacagagaaatggatacagaaaatgtggtatgtctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtatagacactatgcccctccttagaagtgggaa
caaatcacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatatccagggatccaccccataatc
agcttccaaatgctgaaaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagatgtctctttgagactatgccggggcctagtaaaca
cagaagtggatgctcacagtcagcgaatgggatggatcaacagggcctcc
catagaggagctagagaaagtacccaggaactaaagggatctgcaaccta
taggcggacacattatgaactaaccagtaccccgagctcttgactcttag
ctgcatatgtatcaaaagatggcctagtcgccatcactgaagagaggccc
ttggacattcaactgtaatggcccggtacaggactcaagcagaagaatgg
cagttaggttaggatttgaacgaaggtcttactcctcctgct
gaattctgagaccatcccagctagtgggctgcagggtgggggcagcggca
cccggaatactcaggcctaacggttccattttcatctgacacccagtaag
tacaagcactaacgggtccgctctgccttgtctgttttccagctactccg
cgtagcaaccagcgtgtgttccccgctcggccgcagaggcctggcagagc
ctcgcgggcggctgcgcgcaggctctagcgcgcaggcgcggcgcacgctg
ccccagcccccggaacggtaaacagtggcgtcacgtgacgcggccccgct
cctgctcccgcgccgccgccgccgcaagccgatggctgcgggctctcgcg
gcgccgcacaggctccacgaggcgagcgacccccgggctcagggaagcag
cgactgcagctcggacggggagggcggagcgcaggccggccgtagtgtcg
tcaccgcggcggcgcgggccggggagccccgagcccaggcagcaacgccg
acgccctgcgcgcaccccctccgcggccccctcctccgcggccccgcggc
ctccatctttcctctggctgccggtggcagcgctcgtctgcggagcgggt
gagtggcggctccctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30930377_30931019
seq2: B6Ng01-193K10.g_66_682 (reverse)

seq1  GGAGGGAGGCCACCGAGTGCCCGTCGCGGCGGGCGCCGCCACTCACCCGC  50
                                 || ||| ||||||||||||||||
seq2  ---------------------------GGAGGGAGCCGCCACTCACCCGC  23

seq1  TCCGCAGACGAGCGCTGCCACCGGCAGCCAGAGG-AAGATGGAGGCCGCG  99
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCGCAGACGAGCGCTGCCACCGGCAGCCAGAGGAAAGATGGAGGCCGCG  73

seq1  GGGCCGCGGAGGAGGGGGCCGCGGAGGGGGTGCGCGCAGGGCGTCGGCGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGCGGAGGAGGGGGCCGCGGAGGGGGTGCGCGCAGGGCGTCGGCGT  123

seq1  TGCTGCCTGGGCTCGGGGCTCCCCGGCCCGCGCCGCCGCGGTGACGACAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTGGGCTCGGGGCTCCCCGGCCCGCGCCGCCGCGGTGACGACAC  173

seq1  TACGGCCGGCCTGCGCTCCGCCCTCCCCGTCCGAGCTGCAGTCGCTGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCCGGCCTGCGCTCCGCCCTCCCCGTCCGAGCTGCAGTCGCTGCTT  223

seq1  CCCTGAGCCCGGGGGTCGCTCGCCTCGTGGAGCCTGTGCGGCGCCGCGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCCCGGGGGTCGCTCGCCTCGTGGAGCCTGTGCGGCGCCGCGAG  273

seq1  AGCCCGCAGCCATCGGCTTGCGGCGGCGGCGGCGCGGGAGCAGGAGCGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGCAGCCATCGGCTTGCGGCGGCGGCGGCGCGGGAGCAGGAGCGGG  323

seq1  GCCGCGTCACGTGACGCCACTGTTTACCGTTCCGGGGGCTGGGGCAGCGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCGTCACGTGACGCCACTGTTTACCGTTCCGGGGGCTGGGGCAGCGT  373

seq1  GCGCCGCGCCTGCGCGCTAGAGCCTGCGCGCAGCCGCCCGCGAGGCTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGCGCCTGCGCGCTAGAGCCTGCGCGCAGCCGCCCGCGAGGCTCTG  423

seq1  CCAGGCCTCTGCGGCCGAGCGGGGAACACACGCTGGTTGCTACGCGGAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTCTGCGGCCGAGCGGGGAACACACGCTGGTTGCTACGCGGAGT  473

seq1  AGCTGGAAAACAGACAAGGCAGAGCGGACCCGTTAGTGCTTGTACTTACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAAAACAGACAAGGCAGAGCGGACCCGTTAGTGCTTGTACTTACT  523

seq1  GGGTGTCAGATGAAAATGGAACCGTTAGGCCTGAGTATTCCGGGTGCCGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAGATGAAAATGGAACCGTTAGGCCTGAGTATTCCGGGTGCCGC  573

seq1  TGCCCCCACCCTGCAGCCCACTAGCTGGGATGGTCTCAGAATTC  643
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCACCCTGCAGCCCACTAGCTGGGATGGTCTCAGAATTC  617