BAC Information

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BAC

Clone NameB6Ng01-195C14
Chromosome1 (Build37)
Map Location 94,130,579 - 94,131,343
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2f, LOC665783, Scly, Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2, Traf3ip1, Asb1, Twist2, Hdac4
Downstream geneLOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos, Gpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195C14.bB6Ng01-195C14.g
ACCGA017656GA017657
length7621,185
definitionB6Ng01-195C14.b B6Ng01-195C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacctggtactgtaaatttagccaagtctgtgctgggggaatc
ataggctatagaggaaggagaacctactactgttgtcttgataaatgggc
atgttatccaccaaactgctttctagacgtttatgcctataggctagtgt
tgctctcagccttagtcacagaagcatctatttatagtgggaagatcatt
tcaaaggacgcaatccacccacagccgtgtcaagcccagcatatgaaagg
cacacacatacaaggagttcagatatcaccttgtatgtttgtcttgagcc
aaccagcagaactggaggctggacaggcctgatagtatcttcagcacgtg
ggagggtaggatgagggctgagaggaggaggaacttgatcaagtaacaac
cgaagaggaaggaggtgaagatgacagtaggttcttcctgtgaagagtgg
tggggacctagggtaggaagagggaagaggagccttgagattaggccctg
ggggtctgaatgtgggagggaaaggagctgggagagagccctagtcagtg
cttgggactgaagaacatgtcccacagaagatatcgtgtctcgtccactt
ttaaaggcaagggcatcatggagctatcactttcaaagagtgacaatgag
ggtgtggttcgtcagacccttgttattcaggcctgagaaggtttcctgca
taggtgttccaaatgacggctgggtggaacagggaggctacaggaggcac
ttgatttcatgc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattagacatagcaatacctctcctgggcatatatccagaagatgc
cccaacgggtaagaaggacacatgctccactatgttcatagcagccttat
ttataatagccagaagctggaaagaacccagatgcccctcaacagaggaa
tggatacagaaaatgtggtatatctacacaatggagtactactcagctat
taaaaagaatgaatttatgaaattcctagccaaatggatggacctggagg
gcatcatcctgagtgaggtaacacattcacaaaggaactcacacaatatg
tactcactgataagtggatattagccccaaacctaggatacccaagatat
aagatacaatttgctaaacacatgaaactcaagaagaaagaagactgaag
tgtggacactatgcccctccttagaattgggaacaaaacacccatgaaag
gagttacagagacaaagtttggagctgagatgaaaggatggaccatgtag
agactgccatatccagggatccaccccataatcagcatccaaacgctgac
acaattgcatacactagcaagatttttattgaaaggacccagatgtagct
gtctcttgtgagacttatgccggggcctagcaaacacagaagtggatgct
cacagtcagctagtggatggatcacagggctcccaatggaggagctagaa
gaaagtagcccaaggagctaaagggatctgcaaccctattaggtggaaca
cattatgactaaccagtaccccggagctcttgactcttagctgcattatg
tatcaaaagatgggcctagtcggcattccacttgaaagagaggcccattg
gacactgcaaacctttatatgcccagttacagggtaacgcagtccaaatg
gggaagtgggtggctaggggcattcgtttcgagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94130579_94131343
seq2: B6Ng01-195C14.b_45_806 (reverse)

seq1  GCATGACTGCCTGAATC-AGTGCCTCCTGTCGCCTCCCTG-TCCACCCAG  48
      ||||||       |||| |||||||||||| ||||||||| |||||||||
seq2  GCATGA-------AATCAAGTGCCTCCTGTAGCCTCCCTGTTCCACCCAG  43

seq1  CCGTCATTTGGAACACCTATGCAGG-AACCTTCTCAGGCCTGAATAACAA  97
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCGTCATTTGGAACACCTATGCAGGAAACCTTCTCAGGCCTGAATAACAA  93

seq1  -GGTCTGACGAACCACACCCTCATTGTCACTCTTTGAAAGTGATAGCTCC  146
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGACGAACCACACCCTCATTGTCACTCTTTGAAAGTGATAGCTCC  143

seq1  ATGATGCCCTTGCCTTTAAAAGTGGACGAGACACGATATCTTCTGTGGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCCTTGCCTTTAAAAGTGGACGAGACACGATATCTTCTGTGGGA  193

seq1  CATGTTCTTCAGTCCCAAGCACTGACTAGGGCTCTCTCCCAGCTCCTTTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTTCAGTCCCAAGCACTGACTAGGGCTCTCTCCCAGCTCCTTTC  243

seq1  CCTCCCACATTCAGACCCCCAGGGCCTAATCTCAAGGCTCCTCTTCCCTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACATTCAGACCCCCAGGGCCTAATCTCAAGGCTCCTCTTCCCTC  293

seq1  TTCCTACCCTAGGTCCCCACCACTCTTCACAGGAAGAACCTACTGTCATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCCTAGGTCCCCACCACTCTTCACAGGAAGAACCTACTGTCATC  343

seq1  TTCACCTCCTTCCTCTTCGGTTGTTACTTGATCAAGTTCCTCCTCCTCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTCCTTCCTCTTCGGTTGTTACTTGATCAAGTTCCTCCTCCTCTC  393

seq1  AGCCCTCATCCTACCCTCCCACGTGCTGAAGATACTATCAGGCCTGTCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCATCCTACCCTCCCACGTGCTGAAGATACTATCAGGCCTGTCCA  443

seq1  GCCTCCAGTTCTGCTGGTTGGCTCAAGACAAACATACAAGGTGATATCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGTTCTGCTGGTTGGCTCAAGACAAACATACAAGGTGATATCTG  493

seq1  AACTCCTTGTATGTGTGTGCCTTTCATATGCTGGGCTTGACACGGCTGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTGTATGTGTGTGCCTTTCATATGCTGGGCTTGACACGGCTGTG  543

seq1  GGTGGATTGCGTCCTTTGAAATGATCTTCCCACTATAAATAGATGCTTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTGCGTCCTTTGAAATGATCTTCCCACTATAAATAGATGCTTCT  593

seq1  GTGACTAAGGCTGAGAGCAACACTAGCCTATAGGCATAAACGTCTAGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAAGGCTGAGAGCAACACTAGCCTATAGGCATAAACGTCTAGAAA  643

seq1  GCAGTTTGGTGGATAACATGCCCATTTATCAAGACAACAGTAGTAGGTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGTGGATAACATGCCCATTTATCAAGACAACAGTAGTAGGTTC  693

seq1  TCCTTCCTCTATAGCCTATGATTCCCCCAGCACAGACTTGGCTAAATTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCTATAGCCTATGATTCCCCCAGCACAGACTTGGCTAAATTTA  743

seq1  CAGTACCAGGTATGAATTC  765
      |||||||||||||||||||
seq2  CAGTACCAGGTATGAATTC  762