BAC Information

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BAC

Clone NameB6Ng01-196J07
Chromosome1 (Build37)
Map Location 97,534,667 - 97,535,785
singlet/doubletsinglet
Overlap geneSt8sia4
Upstream geneLOC100040685, LOC383603, Tmem157, LOC100041686, Rnu7-ps2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196J07.bB6Ng01-196J07.g
ACCGA018684GA018685
length1,125639
definitionB6Ng01-196J07.b B6Ng01-196J07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaagacagaggttcttcagagccaggactttgaatataatgtt
aaaatggtgaatcataaataatgtattgtgcatcattatctactcccgct
gtctctcccactactgcaattactgtattagggcacacgtacagtaatta
aaatgattataccaaattttcataaagtatggaaagggaacactgtcatt
ttctattctaatctactatattctttaattctccaaacttgctcattcat
gaccccaaattaattcatgatccaccagtggatctagcttagtgaacaaa
attaattagaaactaatggcaataatagttcaaagaaatgtgagggtgcc
tcaccctagaaaatatcaataggactaaagaagacagaatgtatttaggg
gaatttttctgaaaagaattttcagatatttgtaagggatgaagtatgaa
aagtaaaaacaacagggggagggatccagacctttcagtcctgtttatat
gcatctgtttaaaatgtctaagcaacatgccactgggataaacacaatgt
aatggatgtgaagttcttgtgacattagcaatagaaatgtccttgcttct
acactcatgacctgatattttcctggaagcttagatagtatgagaacatc
ttaattttctgagaattacactgtctttctgggacccactgttaaataaa
tcatatataccatgtaagaacacattttcaagtttctattgtagtttcaa
cacatgcacacacatgtgcattcacgtacgtgcaatggaaaaggattttt
aaaataatcagtttcaagttttcttaaacaagccacgtaaatgtcaaagc
agtgcagttttgacaagtattatatgatattcactgaaagccagagatct
cagagatccacttcctacaagctttctactcatctcatgggactcagtat
attaaacactgaatttgcaaggggaaaaatgataggtttttctagttatg
ggtaatttggagttggcaccagaaaatattcctattaaatgtctttcctc
tattagtacagaggatattttttaatgtcttaatgtcatgcctgatcaga
cttgccttcttgcgaaagaatagta
gaattcttagggtctaatgaagaaacctgtctcagtgggattccctaact
tttctcatagtaaacccttattgggttaagactgtcctttctgtccaaat
aaacattttgcagagtagcactgaactgttggctccatcttttgtaatgc
taaattagttactgaataggtaacttccttgctgaattcctactgaatta
caagtagtcagcttcacggtcttactaggaagttggaactctggcgaaga
cttaactttatcaggattcaattttgaaaggcactatagtaagataacac
taaaggagagtatgtggatcctccttaacagccttgggtgataggcaggg
aacagagaggagggggtgaagatgagctccctagctcaaggccatttggc
ttgttagggtgggagactgtgaaagggcttgccttctcagggtatgatct
ccaacctctctcccctctttgaattaaattaaataaggccacacttaact
gaggtgatcaaatgatcttctcatccttggatgagtgggcattaaccatg
gctgggggagcattgacccgattcctcccgtgggtgctgtcaggacccac
aatcatggctcttggtatcttttggggaggggagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97534667_97535785
seq2: B6Ng01-196J07.b_46_1170 (reverse)

seq1  TACTATTCTTTCGC-AGAAGCAAGGTCTGATTCAGCATGACATTTAAGAC  49
      |||||||||||||| |||||  | |||||||   |||||||| |||||||
seq2  TACTATTCTTTCGCAAGAAGGCAAGTCTGATCAGGCATGACA-TTAAGAC  49

seq1  ATT-AAAAATATTCTCTGTACTAAATAGAGAAAAAGAACATTT-ATA-GA  96
      ||| |||||||| ||||||||| ||||||| |||   |||||| ||| ||
seq2  ATTAAAAAATATCCTCTGTACT-AATAGAGGAAA--GACATTTAATAGGA  96

seq1  ATA-TTTCTGTTGCC-ACTCC-AATTACCCAT-ACTAG-AAAACCTATCA  141
      ||| |||||| |||| ||||| |||||||||| ||||| |||||||||||
seq2  ATATTTTCTGGTGCCAACTCCAAATTACCCATAACTAGAAAAACCTATCA  146

seq1  -TTTTCCCTTTGC-AATTCAGTG-TTAATATACTGAGTCCCATGAGATGA  188
       ||||||| |||| ||||||||| ||||||||||||||||||||||||||
seq2  TTTTTCCCCTTGCAAATTCAGTGTTTAATATACTGAGTCCCATGAGATGA  196

seq1  GTAGAAAGCTTGTAGGAAGTGGATCTCTGAGATCTCTGGCTTTCAGTGAA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGCTTGTAGGAAGTGGATCTCTGAGATCTCTGGCTTTCAGTGAA  246

seq1  TATCATATAATACTTGTCAAAACTGCACTGCTTTGACATTTACGTGGCTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATAATACTTGTCAAAACTGCACTGCTTTGACATTTACGTGGCTT  296

seq1  GTTTAAGAAAACTTTGAAACTGATTATTTTTAAAAATCCTTTTCCATTGC  338
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  GTTTAAGAAAAC-TTGAAACTGATTA-TTTTAAAAATCCTTTTCCATTGC  344

seq1  ACGTACGTGAATGCACATGTGTGTGCATGTGTTGAAACTACAATAGAAAC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACGTGAATGCACATGTGTGTGCATGTGTTGAAACTACAATAGAAAC  394

seq1  TTGAAAATGTGTTCTTACATGGTATATATGATTTATTTAACAGTGGGTCC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATGTGTTCTTACATGGTATATATGATTTATTTAACAGTGGGTCC  444

seq1  CAGAAAGACAGTGTAATTCTCAGAAAATTAAGATGTTCTCATACTATCTA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGACAGTGTAATTCTCAGAAAATTAAGATGTTCTCATACTATCTA  494

seq1  AGCTTCCAGGAAAATATCAGGTCATGAGTGTAGAAGCAAGGACATTTCTA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAGGAAAATATCAGGTCATGAGTGTAGAAGCAAGGACATTTCTA  544

seq1  TTGCTAATGTCACAAGAACTTCACATCCATTACATTGTGTTTATCCCAGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAATGTCACAAGAACTTCACATCCATTACATTGTGTTTATCCCAGT  594

seq1  GGCATGTTGCTTAGACATTTTAAACAGATGCATATAAACAGGACTGAAAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTTGCTTAGACATTTTAAACAGATGCATATAAACAGGACTGAAAG  644

seq1  GTCTGGATCCCTCCCCCTGTTGTTTTTACTTTTCATACTTCATCCCTTAC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATCCCTCCCCCTGTTGTTTTTACTTTTCATACTTCATCCCTTAC  694

seq1  AAATATCTGAAAATTCTTTTCAGAAAAATTCCCCTAAATACATTCTGTCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTGAAAATTCTTTTCAGAAAAATTCCCCTAAATACATTCTGTCT  744

seq1  TCTTTAGTCCTATTGATATTTTCTAGGGTGAGGCACCCTCACATTTCTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTCCTATTGATATTTTCTAGGGTGAGGCACCCTCACATTTCTTT  794

seq1  GAACTATTATTGCCATTAGTTTCTAATTAATTTTGTTCACTAAGCTAGAT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTATTGCCATTAGTTTCTAATTAATTTTGTTCACTAAGCTAGAT  844

seq1  CCACTGGTGGATCATGAATTAATTTGGGGTCATGAATGAGCAAGTTTGGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGTGGATCATGAATTAATTTGGGGTCATGAATGAGCAAGTTTGGA  894

seq1  GAATTAAAGAATATAGTAGATTAGAATAGAAAATGACAGTGTTCCCTTTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAGAATATAGTAGATTAGAATAGAAAATGACAGTGTTCCCTTTC  944

seq1  CATACTTTATGAAAATTTGGTATAATCATTTTAATTACTGTACGTGTGCC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTATGAAAATTTGGTATAATCATTTTAATTACTGTACGTGTGCC  994

seq1  CTAATACAGTAATTGCAGTAGTGGGAGAGACAGCGGGAGTAGATAATGAT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACAGTAATTGCAGTAGTGGGAGAGACAGCGGGAGTAGATAATGAT  1044

seq1  GCACAATACATTATTTATGATTCACCATTTTAACATTATATTCAAAGTCC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATACATTATTTATGATTCACCATTTTAACATTATATTCAAAGTCC  1094

seq1  TGGCTCTGAAGAACCTCTGTCTTAGGAATTC  1119
      |||||||||||||||||||||||||||||||
seq2  TGGCTCTGAAGAACCTCTGTCTTAGGAATTC  1125